RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
COPS4-207ENST00000509317 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
COPS4-207ENST00000509317 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
COPS4-207ENST00000509317 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.52
COPS4-207ENST00000509317 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
COPS4-207ENST00000509317 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
COPS4-207ENST00000509317 DIP2BQ9P265 1576 aa18.27■□□□□ 0.52
COPS4-207ENST00000509317 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
COPS4-207ENST00000509317 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
COPS4-207ENST00000509317 MAPKBP1O60336 1514 aa18.25■□□□□ 0.51
COPS4-207ENST00000509317 IGF1RP08069 1367 aa18.19■□□□□ 0.5
COPS4-207ENST00000509317 KDM6BO15054 1643 aa18.19■□□□□ 0.5
COPS4-207ENST00000509317 KIAA0586Q9BVV6 1533 aa18.18■□□□□ 0.5
COPS4-207ENST00000509317 TSPOAP1O95153 1857 aa18.17■□□□□ 0.5
COPS4-207ENST00000509317 PTPRGP23470 1445 aa18.12■□□□□ 0.49
COPS4-207ENST00000509317 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
COPS4-207ENST00000509317 ILDR1Q86SU0 546 aaPredicted RBP18.06■□□□□ 0.48
COPS4-207ENST00000509317 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
COPS4-207ENST00000509317 CUL7Q14999 1698 aa18.05■□□□□ 0.48
COPS4-207ENST00000509317 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
COPS4-207ENST00000509317 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
COPS4-207ENST00000509317 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
COPS4-207ENST00000509317 COL17A1Q9UMD9 1497 aaPredicted RBP18.01■□□□□ 0.47
COPS4-207ENST00000509317 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
COPS4-207ENST00000509317 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
COPS4-207ENST00000509317 ADGRL1O94910 1474 aa17.99■□□□□ 0.47
COPS4-207ENST00000509317 PLB1Q6P1J6 1458 aa17.98■□□□□ 0.47
COPS4-207ENST00000509317 IQGAP2Q13576 1575 aa17.96■□□□□ 0.46
COPS4-207ENST00000509317 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
COPS4-207ENST00000509317 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
COPS4-207ENST00000509317 GLI2P10070 1586 aa17.95■□□□□ 0.46
COPS4-207ENST00000509317 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
COPS4-207ENST00000509317 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
COPS4-207ENST00000509317 KDM5BQ9UGL1 1544 aa17.88■□□□□ 0.45
COPS4-207ENST00000509317 MAP3K4Q9Y6R4 1608 aa17.86■□□□□ 0.45
COPS4-207ENST00000509317 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
COPS4-207ENST00000509317 HECW2Q9P2P5 1572 aa17.84■□□□□ 0.45
COPS4-207ENST00000509317 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
COPS4-207ENST00000509317 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
COPS4-207ENST00000509317 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
COPS4-207ENST00000509317 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
COPS4-207ENST00000509317 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
COPS4-207ENST00000509317 WDR7Q9Y4E6 1490 aa17.79■□□□□ 0.44
COPS4-207ENST00000509317 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
COPS4-207ENST00000509317 CD109Q6YHK3 1445 aa17.73■□□□□ 0.43
COPS4-207ENST00000509317 MAGI3Q5TCQ9 1506 aa17.68■□□□□ 0.42
COPS4-207ENST00000509317 ABCA8O94911 1581 aa17.68■□□□□ 0.42
COPS4-207ENST00000509317 KIF21BO75037 1637 aa17.65■□□□□ 0.42
COPS4-207ENST00000509317 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
COPS4-207ENST00000509317 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
COPS4-207ENST00000509317 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
COPS4-207ENST00000509317 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
COPS4-207ENST00000509317 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
COPS4-207ENST00000509317 ATP10BO94823 1461 aa17.56■□□□□ 0.4
COPS4-207ENST00000509317 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
COPS4-207ENST00000509317 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
COPS4-207ENST00000509317 PTPRMP28827 1452 aa17.53■□□□□ 0.4
COPS4-207ENST00000509317 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
COPS4-207ENST00000509317 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
COPS4-207ENST00000509317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
COPS4-207ENST00000509317 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
COPS4-207ENST00000509317 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
COPS4-207ENST00000509317 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
COPS4-207ENST00000509317 ABCA9Q8IUA7 1624 aa17.47■□□□□ 0.39
COPS4-207ENST00000509317 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
COPS4-207ENST00000509317 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
COPS4-207ENST00000509317 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
COPS4-207ENST00000509317 HSPA2P54652 639 aa17.41■□□□□ 0.38
COPS4-207ENST00000509317 NEO1Q92859 1461 aa17.41■□□□□ 0.38
COPS4-207ENST00000509317 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
COPS4-207ENST00000509317 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
COPS4-207ENST00000509317 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
COPS4-207ENST00000509317 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
COPS4-207ENST00000509317 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
COPS4-207ENST00000509317 BCORL1Q5H9F3 1711 aa17.4■□□□□ 0.38
COPS4-207ENST00000509317 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
COPS4-207ENST00000509317 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
COPS4-207ENST00000509317 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
COPS4-207ENST00000509317 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
COPS4-207ENST00000509317 RIMS1Q86UR5 1692 aaKnown RBP17.35■□□□□ 0.37
COPS4-207ENST00000509317 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
COPS4-207ENST00000509317 DENND4BO75064 1496 aaPredicted RBP17.33■□□□□ 0.37
COPS4-207ENST00000509317 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
COPS4-207ENST00000509317 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
COPS4-207ENST00000509317 MLECQ14165 292 aa17.32■□□□□ 0.36
COPS4-207ENST00000509317 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
COPS4-207ENST00000509317 FANCAO15360 1455 aa17.31■□□□□ 0.36
COPS4-207ENST00000509317 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
COPS4-207ENST00000509317 RICTORQ6R327 1708 aa17.29■□□□□ 0.36
COPS4-207ENST00000509317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.28■□□□□ 0.36
COPS4-207ENST00000509317 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
COPS4-207ENST00000509317 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
COPS4-207ENST00000509317 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
COPS4-207ENST00000509317 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
COPS4-207ENST00000509317 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
COPS4-207ENST00000509317 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
COPS4-207ENST00000509317 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
COPS4-207ENST00000509317 HECW1Q76N89 1606 aa17.21■□□□□ 0.35
COPS4-207ENST00000509317 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
COPS4-207ENST00000509317 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms