RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
NEDD9-211ENST00000508546 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
NEDD9-211ENST00000508546 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
NEDD9-211ENST00000508546 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
NEDD9-211ENST00000508546 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
NEDD9-211ENST00000508546 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
NEDD9-211ENST00000508546 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
NEDD9-211ENST00000508546 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
NEDD9-211ENST00000508546 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
NEDD9-211ENST00000508546 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
NEDD9-211ENST00000508546 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
NEDD9-211ENST00000508546 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
NEDD9-211ENST00000508546 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
NEDD9-211ENST00000508546 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
NEDD9-211ENST00000508546 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
NEDD9-211ENST00000508546 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
NEDD9-211ENST00000508546 GLI2P10070 1586 aa16.93■□□□□ 0.3
NEDD9-211ENST00000508546 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
NEDD9-211ENST00000508546 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
NEDD9-211ENST00000508546 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
NEDD9-211ENST00000508546 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
NEDD9-211ENST00000508546 CUL7Q14999 1698 aa16.85■□□□□ 0.29
NEDD9-211ENST00000508546 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
NEDD9-211ENST00000508546 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
NEDD9-211ENST00000508546 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.28
NEDD9-211ENST00000508546 KIF21BO75037 1637 aa16.77■□□□□ 0.27
NEDD9-211ENST00000508546 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
NEDD9-211ENST00000508546 IGF1RP08069 1367 aa16.75■□□□□ 0.27
NEDD9-211ENST00000508546 PTPRGP23470 1445 aa16.74■□□□□ 0.27
NEDD9-211ENST00000508546 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
NEDD9-211ENST00000508546 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
NEDD9-211ENST00000508546 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
NEDD9-211ENST00000508546 SOCS7O14512 581 aa16.68■□□□□ 0.26
NEDD9-211ENST00000508546 TTBK1Q5TCY1 1321 aaPredicted RBP16.68■□□□□ 0.26
NEDD9-211ENST00000508546 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
NEDD9-211ENST00000508546 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
NEDD9-211ENST00000508546 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
NEDD9-211ENST00000508546 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
NEDD9-211ENST00000508546 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
NEDD9-211ENST00000508546 PTPRMP28827 1452 aa16.64■□□□□ 0.25
NEDD9-211ENST00000508546 ADAMTSL3P82987 1691 aa16.63■□□□□ 0.25
NEDD9-211ENST00000508546 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
NEDD9-211ENST00000508546 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
NEDD9-211ENST00000508546 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
NEDD9-211ENST00000508546 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
NEDD9-211ENST00000508546 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
NEDD9-211ENST00000508546 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
NEDD9-211ENST00000508546 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
NEDD9-211ENST00000508546 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
NEDD9-211ENST00000508546 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
NEDD9-211ENST00000508546 MADDQ8WXG6 1647 aa16.55■□□□□ 0.24
NEDD9-211ENST00000508546 BCORL1Q5H9F3 1711 aa16.52■□□□□ 0.24
NEDD9-211ENST00000508546 UGGT2Q9NYU1 1516 aa16.5■□□□□ 0.23
NEDD9-211ENST00000508546 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
NEDD9-211ENST00000508546 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
NEDD9-211ENST00000508546 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
NEDD9-211ENST00000508546 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
NEDD9-211ENST00000508546 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
NEDD9-211ENST00000508546 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
NEDD9-211ENST00000508546 HSPA2P54652 639 aa16.41■□□□□ 0.22
NEDD9-211ENST00000508546 FRMPD1Q5SYB0 1578 aa16.41■□□□□ 0.22
NEDD9-211ENST00000508546 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
NEDD9-211ENST00000508546 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
NEDD9-211ENST00000508546 ABCA8O94911 1581 aa16.34■□□□□ 0.21
NEDD9-211ENST00000508546 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
NEDD9-211ENST00000508546 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
NEDD9-211ENST00000508546 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
NEDD9-211ENST00000508546 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
NEDD9-211ENST00000508546 ARID4BQ4LE39 1312 aaPredicted RBP16.27■□□□□ 0.2
NEDD9-211ENST00000508546 RAPGEF3O95398 923 aa16.27■□□□□ 0.2
NEDD9-211ENST00000508546 NEO1Q92859 1461 aa16.24■□□□□ 0.19
NEDD9-211ENST00000508546 FER1L4A9Z1Z3 1794 aa16.24■□□□□ 0.19
NEDD9-211ENST00000508546 TTC37Q6PGP7 1564 aa16.24■□□□□ 0.19
NEDD9-211ENST00000508546 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
NEDD9-211ENST00000508546 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
NEDD9-211ENST00000508546 PREX1Q8TCU6 1659 aa16.23■□□□□ 0.19
NEDD9-211ENST00000508546 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
NEDD9-211ENST00000508546 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
NEDD9-211ENST00000508546 PRXQ9BXM0 1461 aa16.21■□□□□ 0.19
NEDD9-211ENST00000508546 FANCAO15360 1455 aa16.18■□□□□ 0.18
NEDD9-211ENST00000508546 ATP10BO94823 1461 aa16.18■□□□□ 0.18
NEDD9-211ENST00000508546 ZMYM4Q5VZL5 1548 aa16.15■□□□□ 0.18
NEDD9-211ENST00000508546 FAM9AQ8IZU1 332 aaPredicted RBP16.15■□□□□ 0.18
NEDD9-211ENST00000508546 YEATS2Q9ULM3 1422 aa16.15■□□□□ 0.18
NEDD9-211ENST00000508546 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
NEDD9-211ENST00000508546 LTBP4Q8N2S1 1624 aa16.13■□□□□ 0.17
NEDD9-211ENST00000508546 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
NEDD9-211ENST00000508546 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
NEDD9-211ENST00000508546 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
NEDD9-211ENST00000508546 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
NEDD9-211ENST00000508546 RAPGEF6Q8TEU7 1601 aa16.11■□□□□ 0.17
NEDD9-211ENST00000508546 DENND4BO75064 1496 aaPredicted RBP16.1■□□□□ 0.17
NEDD9-211ENST00000508546 EFCAB5A4FU69 1503 aa16.1■□□□□ 0.17
NEDD9-211ENST00000508546 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
NEDD9-211ENST00000508546 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
NEDD9-211ENST00000508546 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
NEDD9-211ENST00000508546 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
NEDD9-211ENST00000508546 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
NEDD9-211ENST00000508546 PTPRTO14522 1441 aa16.04■□□□□ 0.16
NEDD9-211ENST00000508546 MLECQ14165 292 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms