RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 AQRO60306 1485 aaKnown RBP eCLIP33.82■■■■□ 36e-8■■■■■ 37.1
RNF4-207ENST00000506706 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
RNF4-207ENST00000506706 KANK4Q5T7N3 995 aaPredicted RBP33.78■■■■□ 3
RNF4-207ENST00000506706 GRIN2BQ13224 1484 aa33.75■■■□□ 2.99
RNF4-207ENST00000506706 THOC2Q8NI27 1593 aaKnown RBP33.75■■■□□ 2.99
RNF4-207ENST00000506706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.75■■■□□ 2.99
RNF4-207ENST00000506706 MAP3K1Q13233 1512 aa33.74■■■□□ 2.99
RNF4-207ENST00000506706 P3H3Q8IVL6 736 aa33.72■■■□□ 2.99
RNF4-207ENST00000506706 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
RNF4-207ENST00000506706 FHOD3Q2V2M9 1422 aa33.7■■■□□ 2.99
RNF4-207ENST00000506706 CCER1Q8TC90 406 aaPredicted RBP33.69■■■□□ 2.98
RNF4-207ENST00000506706 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
RNF4-207ENST00000506706 TIAM1Q13009 1591 aa33.68■■■□□ 2.98
RNF4-207ENST00000506706 PCF11O94913 1555 aaKnown RBP33.65■■■□□ 2.98
RNF4-207ENST00000506706 SAMD9Q5K651 1589 aa33.63■■■□□ 2.97
RNF4-207ENST00000506706 HNRNPUL2Q1KMD3 747 aaKnown RBP33.6■■■□□ 2.97
RNF4-207ENST00000506706 FYCO1Q9BQS8 1478 aa33.58■■■□□ 2.97
RNF4-207ENST00000506706 FMN1Q68DA7 1419 aa33.57■■■□□ 2.97
RNF4-207ENST00000506706 EIF4G3O43432 1585 aaKnown RBP33.57■■■□□ 2.96
RNF4-207ENST00000506706 CASKIN1Q8WXD9 1431 aa33.56■■■□□ 2.96
RNF4-207ENST00000506706 CFAP43Q8NDM7 1665 aa33.56■■■□□ 2.96
RNF4-207ENST00000506706 RRBP1Q9P2E9 1410 aaKnown RBP33.54■■■□□ 2.96
RNF4-207ENST00000506706 LRRC9Q6ZRR7 1453 aa33.53■■■□□ 2.96
RNF4-207ENST00000506706 IQGAP2Q13576 1575 aa33.49■■■□□ 2.95
RNF4-207ENST00000506706 SNAPC4Q5SXM2 1469 aa33.48■■■□□ 2.95
RNF4-207ENST00000506706 ATP1B4Q9UN42 357 aaPredicted RBP33.47■■■□□ 2.95
RNF4-207ENST00000506706 CCNB3Q8WWL7 1395 aa33.41■■■□□ 2.94
RNF4-207ENST00000506706 MAGI1Q96QZ7 1491 aaPredicted RBP33.39■■■□□ 2.94
RNF4-207ENST00000506706 GRIN2AQ12879 1464 aa33.36■■■□□ 2.93
RNF4-207ENST00000506706 KIAA0586Q9BVV6 1533 aa33.32■■■□□ 2.92
RNF4-207ENST00000506706 UGGT2Q9NYU1 1516 aa33.32■■■□□ 2.92
RNF4-207ENST00000506706 SYNJ2O15056 1496 aa33.27■■■□□ 2.92
RNF4-207ENST00000506706 PHLDB1Q86UU1 1377 aa33.27■■■□□ 2.92
RNF4-207ENST00000506706 LRRIQ1Q96JM4 1722 aa33.24■■■□□ 2.91
RNF4-207ENST00000506706 CHMP7Q8WUX9 453 aaPredicted RBP33.22■■■□□ 2.91
RNF4-207ENST00000506706 MTUS2Q5JR59 1369 aa33.16■■■□□ 2.9
RNF4-207ENST00000506706 HECW1Q76N89 1606 aa33.15■■■□□ 2.9
RNF4-207ENST00000506706 CCDC18Q5T9S5 1454 aa33.14■■■□□ 2.9
RNF4-207ENST00000506706 KIAA0556O60303 1618 aa33.14■■■□□ 2.9
RNF4-207ENST00000506706 CEP170Q5SW79 1584 aa33.13■■■□□ 2.89
RNF4-207ENST00000506706 DISP1Q96F81 1524 aa33.12■■■□□ 2.89
RNF4-207ENST00000506706 FBLN2P98095 1184 aa33.09■■■□□ 2.89
RNF4-207ENST00000506706 ITGAEP38570 1179 aa33.08■■■□□ 2.89
RNF4-207ENST00000506706 EHBP1L1Q8N3D4 1523 aa33.08■■■□□ 2.89
RNF4-207ENST00000506706 NUP160Q12769 1436 aa33.06■■■□□ 2.88
RNF4-207ENST00000506706 FAM50AQ14320 339 aaKnown RBP33.04■■■□□ 2.88
RNF4-207ENST00000506706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.03■■■□□ 2.88
RNF4-207ENST00000506706 SUPT6HQ7KZ85 1726 aaKnown RBP33.02■■■□□ 2.88
RNF4-207ENST00000506706 EPRSP07814 1512 aaKnown RBP33.02■■■□□ 2.88
RNF4-207ENST00000506706 NCOA2Q15596 1464 aa32.99■■■□□ 2.87
RNF4-207ENST00000506706 FGD6Q6ZV73 1430 aa32.98■■■□□ 2.87
RNF4-207ENST00000506706 DHX57Q6P158 1386 aaKnown RBP32.98■■■□□ 2.87
RNF4-207ENST00000506706 CLSPNQ9HAW4 1339 aa32.97■■■□□ 2.87
RNF4-207ENST00000506706 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
RNF4-207ENST00000506706 CDK13Q14004 1512 aaKnown RBP32.91■■■□□ 2.86
RNF4-207ENST00000506706 MYOM3Q5VTT5 1437 aa32.91■■■□□ 2.86
RNF4-207ENST00000506706 RAPGEF6Q8TEU7 1601 aa32.9■■■□□ 2.86
RNF4-207ENST00000506706 ARHGEF11O15085 1522 aa32.9■■■□□ 2.86
RNF4-207ENST00000506706 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
RNF4-207ENST00000506706 CARMIL2Q6F5E8 1435 aa32.89■■■□□ 2.86
RNF4-207ENST00000506706 SETD5Q9C0A6 1442 aa32.88■■■□□ 2.85
RNF4-207ENST00000506706 RAB3GAP2Q9H2M9 1393 aa32.88■■■□□ 2.85
RNF4-207ENST00000506706 NUP153P49790 1475 aaKnown RBP32.83■■■□□ 2.85
RNF4-207ENST00000506706 ARID3CA6NKF2 412 aa32.78■■■□□ 2.84
RNF4-207ENST00000506706 PTPN23Q9H3S7 1636 aa32.75■■■□□ 2.83
RNF4-207ENST00000506706 CHD1O14646 1710 aa32.75■■■□□ 2.83
RNF4-207ENST00000506706 PLB1Q6P1J6 1458 aa32.71■■■□□ 2.83
RNF4-207ENST00000506706 CDK11AQ9UQ88 783 aaPredicted RBP32.71■■■□□ 2.83
RNF4-207ENST00000506706 TCOF1Q13428 1488 aaKnown RBP32.69■■■□□ 2.82
RNF4-207ENST00000506706 MIA2Q96PC5 1412 aa32.67■■■□□ 2.82
RNF4-207ENST00000506706 PTPRKQ15262 1439 aa32.63■■■□□ 2.81
RNF4-207ENST00000506706 PRG4Q92954 1404 aaPredicted RBP32.61■■■□□ 2.81
RNF4-207ENST00000506706 ABCA8O94911 1581 aa32.6■■■□□ 2.81
RNF4-207ENST00000506706 HFM1A2PYH4 1435 aa32.59■■■□□ 2.81
RNF4-207ENST00000506706 MAPKBP1O60336 1514 aa32.58■■■□□ 2.81
RNF4-207ENST00000506706 TROQ12816 1431 aaPredicted RBP32.57■■■□□ 2.81
RNF4-207ENST00000506706 ZNF316A6NFI3 1004 aaPredicted RBP32.57■■■□□ 2.8
RNF4-207ENST00000506706 SHROOM2Q13796 1616 aa32.53■■■□□ 2.8
RNF4-207ENST00000506706 PTPRGP23470 1445 aa32.49■■■□□ 2.79
RNF4-207ENST00000506706 ADCY10Q96PN6 1610 aa32.49■■■□□ 2.79
RNF4-207ENST00000506706 NAIPQ13075 1403 aa32.49■■■□□ 2.79
RNF4-207ENST00000506706 ATP10BO94823 1461 aa32.44■■■□□ 2.78
RNF4-207ENST00000506706 DIEXFQ68CQ4 756 aaKnown RBP32.43■■■□□ 2.78
RNF4-207ENST00000506706 ITSN2Q9NZM3 1697 aa32.41■■■□□ 2.78
RNF4-207ENST00000506706 AKNAQ7Z591 1439 aa32.41■■■□□ 2.78
RNF4-207ENST00000506706 KIF14Q15058 1648 aa32.4■■■□□ 2.78
RNF4-207ENST00000506706 PLEKHD1A6NEE1 506 aa32.39■■■□□ 2.78
RNF4-207ENST00000506706 GCC2Q8IWJ2 1684 aa32.39■■■□□ 2.78
RNF4-207ENST00000506706 UACAQ9BZF9 1416 aa32.38■■■□□ 2.77
RNF4-207ENST00000506706 CHIC2Q9UKJ5 165 aa32.36■■■□□ 2.77
RNF4-207ENST00000506706 DNMT1P26358 1616 aaKnown RBP32.35■■■□□ 2.77
RNF4-207ENST00000506706 GPATCH8Q9UKJ3 1502 aaKnown RBP32.34■■■□□ 2.77
RNF4-207ENST00000506706 DAPK1P53355 1430 aa32.34■■■□□ 2.77
RNF4-207ENST00000506706 RRP7BPQ9NSQ0 103 aa32.33■■■□□ 2.77
RNF4-207ENST00000506706 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
RNF4-207ENST00000506706 CFDP1Q9UEE9 299 aaPredicted RBP32.31■■■□□ 2.76
RNF4-207ENST00000506706 ZNF644Q9H582 1327 aaPredicted RBP32.3■■■□□ 2.76
RNF4-207ENST00000506706 ABCC5O15440 1437 aa32.29■■■□□ 2.76
RNF4-207ENST00000506706 CAMSAP2Q08AD1 1489 aa32.28■■■□□ 2.76
RNF4-207ENST00000506706 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms