RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.93
CCHCR1-219ENST00000505392 KDM4FA0A1W2PPD8 638 aa20.82■□□□□ 0.92
CCHCR1-219ENST00000505392 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
CCHCR1-219ENST00000505392 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CCHCR1-219ENST00000505392 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
CCHCR1-219ENST00000505392 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
CCHCR1-219ENST00000505392 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
CCHCR1-219ENST00000505392 KDM6BO15054 1643 aa20.64■□□□□ 0.9
CCHCR1-219ENST00000505392 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.9
CCHCR1-219ENST00000505392 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
CCHCR1-219ENST00000505392 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
CCHCR1-219ENST00000505392 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
CCHCR1-219ENST00000505392 IGF1RP08069 1367 aa20.59■□□□□ 0.89
CCHCR1-219ENST00000505392 PTPRGP23470 1445 aa20.58■□□□□ 0.88
CCHCR1-219ENST00000505392 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
CCHCR1-219ENST00000505392 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
CCHCR1-219ENST00000505392 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
CCHCR1-219ENST00000505392 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
CCHCR1-219ENST00000505392 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
CCHCR1-219ENST00000505392 ABCC2Q92887 1545 aa20.45■□□□□ 0.86
CCHCR1-219ENST00000505392 PLB1Q6P1J6 1458 aa20.44■□□□□ 0.86
CCHCR1-219ENST00000505392 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
CCHCR1-219ENST00000505392 ADGRL1O94910 1474 aa20.42■□□□□ 0.86
CCHCR1-219ENST00000505392 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-219ENST00000505392 CUL7Q14999 1698 aa20.38■□□□□ 0.85
CCHCR1-219ENST00000505392 GLI2P10070 1586 aa20.38■□□□□ 0.85
CCHCR1-219ENST00000505392 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
CCHCR1-219ENST00000505392 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
CCHCR1-219ENST00000505392 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
CCHCR1-219ENST00000505392 EPRSP07814 1512 aaKnown RBP20.31■□□□□ 0.84
CCHCR1-219ENST00000505392 IQGAP2Q13576 1575 aa20.27■□□□□ 0.84
CCHCR1-219ENST00000505392 TEX14Q8IWB6 1497 aa20.27■□□□□ 0.84
CCHCR1-219ENST00000505392 DISP1Q96F81 1524 aa20.27■□□□□ 0.83
CCHCR1-219ENST00000505392 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.83
CCHCR1-219ENST00000505392 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
CCHCR1-219ENST00000505392 MAP3K4Q9Y6R4 1608 aa20.21■□□□□ 0.83
CCHCR1-219ENST00000505392 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
CCHCR1-219ENST00000505392 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-219ENST00000505392 CD109Q6YHK3 1445 aa20.15■□□□□ 0.82
CCHCR1-219ENST00000505392 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
CCHCR1-219ENST00000505392 WDR7Q9Y4E6 1490 aa20.14■□□□□ 0.81
CCHCR1-219ENST00000505392 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
CCHCR1-219ENST00000505392 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
CCHCR1-219ENST00000505392 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
CCHCR1-219ENST00000505392 MAGI3Q5TCQ9 1506 aa20.08■□□□□ 0.81
CCHCR1-219ENST00000505392 ARID3CA6NKF2 412 aa20■□□□□ 0.79
CCHCR1-219ENST00000505392 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-219ENST00000505392 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
CCHCR1-219ENST00000505392 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
CCHCR1-219ENST00000505392 ABCA8O94911 1581 aa19.95■□□□□ 0.78
CCHCR1-219ENST00000505392 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
CCHCR1-219ENST00000505392 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
CCHCR1-219ENST00000505392 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
CCHCR1-219ENST00000505392 KIF21BO75037 1637 aa19.94■□□□□ 0.78
CCHCR1-219ENST00000505392 PTPRMP28827 1452 aa19.92■□□□□ 0.78
CCHCR1-219ENST00000505392 ARID4BQ4LE39 1312 aaPredicted RBP19.91■□□□□ 0.78
CCHCR1-219ENST00000505392 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
CCHCR1-219ENST00000505392 ATP10BO94823 1461 aa19.88■□□□□ 0.77
CCHCR1-219ENST00000505392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
CCHCR1-219ENST00000505392 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-219ENST00000505392 CTTNBP2Q8WZ74 1663 aa19.83■□□□□ 0.76
CCHCR1-219ENST00000505392 ADAMTSL3P82987 1691 aa19.82■□□□□ 0.76
CCHCR1-219ENST00000505392 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
CCHCR1-219ENST00000505392 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
CCHCR1-219ENST00000505392 HSPA2P54652 639 aa19.77■□□□□ 0.76
CCHCR1-219ENST00000505392 NEO1Q92859 1461 aa19.77■□□□□ 0.76
CCHCR1-219ENST00000505392 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
CCHCR1-219ENST00000505392 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
CCHCR1-219ENST00000505392 LMTK3Q96Q04 1460 aa19.75■□□□□ 0.75
CCHCR1-219ENST00000505392 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
CCHCR1-219ENST00000505392 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
CCHCR1-219ENST00000505392 PLEKHD1A6NEE1 506 aa19.71■□□□□ 0.75
CCHCR1-219ENST00000505392 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
CCHCR1-219ENST00000505392 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
CCHCR1-219ENST00000505392 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
CCHCR1-219ENST00000505392 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
CCHCR1-219ENST00000505392 MLECQ14165 292 aa19.66■□□□□ 0.74
CCHCR1-219ENST00000505392 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
CCHCR1-219ENST00000505392 AKNAQ7Z591 1439 aa19.66■□□□□ 0.74
CCHCR1-219ENST00000505392 RAPGEF6Q8TEU7 1601 aa19.63■□□□□ 0.73
CCHCR1-219ENST00000505392 POGZQ7Z3K3 1410 aa19.63■□□□□ 0.73
CCHCR1-219ENST00000505392 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-219ENST00000505392 NUP153P49790 1475 aaKnown RBP19.61■□□□□ 0.73
CCHCR1-219ENST00000505392 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
CCHCR1-219ENST00000505392 FANCAO15360 1455 aa19.6■□□□□ 0.73
CCHCR1-219ENST00000505392 SAMD9Q5K651 1589 aa19.58■□□□□ 0.73
CCHCR1-219ENST00000505392 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.72
CCHCR1-219ENST00000505392 ARHGEF40Q8TER5 1519 aa19.57■□□□□ 0.72
CCHCR1-219ENST00000505392 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
CCHCR1-219ENST00000505392 ILDR2Q71H61 639 aa19.53■□□□□ 0.72
CCHCR1-219ENST00000505392 RICTORQ6R327 1708 aa19.53■□□□□ 0.72
CCHCR1-219ENST00000505392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.721e-5■■■■□ 25.8
CCHCR1-219ENST00000505392 DISP3Q9P2K9 1392 aa19.52■□□□□ 0.72
CCHCR1-219ENST00000505392 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
CCHCR1-219ENST00000505392 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
CCHCR1-219ENST00000505392 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CCHCR1-219ENST00000505392 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
CCHCR1-219ENST00000505392 EFCAB5A4FU69 1503 aa19.49■□□□□ 0.71
CCHCR1-219ENST00000505392 ZMYM4Q5VZL5 1548 aa19.48■□□□□ 0.71
CCHCR1-219ENST00000505392 SOCS7O14512 581 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms