RNA–Protein interactions for RNA: ENST00000504310.5

SPP1-204, Transcript of secreted phosphoprotein 1, humanhuman

TSL 3

Gene SPP1, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-204ENST00000504310 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
SPP1-204ENST00000504310 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
SPP1-204ENST00000504310 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
SPP1-204ENST00000504310 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
SPP1-204ENST00000504310 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
SPP1-204ENST00000504310 IGF1RP08069 1367 aa12.48□□□□□ -0.41
SPP1-204ENST00000504310 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
SPP1-204ENST00000504310 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
SPP1-204ENST00000504310 FHAD1B1AJZ9 1412 aa12.44□□□□□ -0.42
SPP1-204ENST00000504310 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
SPP1-204ENST00000504310 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
SPP1-204ENST00000504310 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
SPP1-204ENST00000504310 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
SPP1-204ENST00000504310 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
SPP1-204ENST00000504310 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
SPP1-204ENST00000504310 PCF11O94913 1555 aaKnown RBP12.38□□□□□ -0.43
SPP1-204ENST00000504310 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
SPP1-204ENST00000504310 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SPP1-204ENST00000504310 LRRC9Q6ZRR7 1453 aa12.35□□□□□ -0.43
SPP1-204ENST00000504310 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
SPP1-204ENST00000504310 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
SPP1-204ENST00000504310 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
SPP1-204ENST00000504310 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
SPP1-204ENST00000504310 DHX57Q6P158 1386 aaKnown RBP12.33□□□□□ -0.44
SPP1-204ENST00000504310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPP1-204ENST00000504310 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
SPP1-204ENST00000504310 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
SPP1-204ENST00000504310 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
SPP1-204ENST00000504310 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
SPP1-204ENST00000504310 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
SPP1-204ENST00000504310 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
SPP1-204ENST00000504310 NESP48681 1621 aa12.29□□□□□ -0.44
SPP1-204ENST00000504310 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
SPP1-204ENST00000504310 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
SPP1-204ENST00000504310 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
SPP1-204ENST00000504310 ZBTB22O15209 634 aa12.27□□□□□ -0.45
SPP1-204ENST00000504310 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
SPP1-204ENST00000504310 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
SPP1-204ENST00000504310 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
SPP1-204ENST00000504310 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
SPP1-204ENST00000504310 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
SPP1-204ENST00000504310 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
SPP1-204ENST00000504310 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
SPP1-204ENST00000504310 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
SPP1-204ENST00000504310 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
SPP1-204ENST00000504310 MAPKBP1O60336 1514 aa12.21□□□□□ -0.46
SPP1-204ENST00000504310 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
SPP1-204ENST00000504310 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
SPP1-204ENST00000504310 RANGAP1P46060 587 aaPredicted RBP12.19□□□□□ -0.46
SPP1-204ENST00000504310 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
SPP1-204ENST00000504310 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
SPP1-204ENST00000504310 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
SPP1-204ENST00000504310 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
SPP1-204ENST00000504310 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
SPP1-204ENST00000504310 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
SPP1-204ENST00000504310 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
SPP1-204ENST00000504310 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
SPP1-204ENST00000504310 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
SPP1-204ENST00000504310 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
SPP1-204ENST00000504310 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
SPP1-204ENST00000504310 WDR62O43379 1518 aa12.15□□□□□ -0.46
SPP1-204ENST00000504310 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
SPP1-204ENST00000504310 TIMELESSQ9UNS1 1208 aa12.14□□□□□ -0.47
SPP1-204ENST00000504310 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
SPP1-204ENST00000504310 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
SPP1-204ENST00000504310 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
SPP1-204ENST00000504310 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
SPP1-204ENST00000504310 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
SPP1-204ENST00000504310 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
SPP1-204ENST00000504310 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
SPP1-204ENST00000504310 NCOA2Q15596 1464 aa12.08□□□□□ -0.47
SPP1-204ENST00000504310 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
SPP1-204ENST00000504310 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
SPP1-204ENST00000504310 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
SPP1-204ENST00000504310 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
SPP1-204ENST00000504310 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
SPP1-204ENST00000504310 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
SPP1-204ENST00000504310 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
SPP1-204ENST00000504310 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
SPP1-204ENST00000504310 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
SPP1-204ENST00000504310 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.48
SPP1-204ENST00000504310 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.48
SPP1-204ENST00000504310 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
SPP1-204ENST00000504310 MIER1Q8N108 512 aa12.01□□□□□ -0.49
SPP1-204ENST00000504310 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
SPP1-204ENST00000504310 MAGI1Q96QZ7 1491 aaPredicted RBP12□□□□□ -0.49
SPP1-204ENST00000504310 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
SPP1-204ENST00000504310 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
SPP1-204ENST00000504310 NAIPQ13075 1403 aa11.98□□□□□ -0.49
SPP1-204ENST00000504310 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
SPP1-204ENST00000504310 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
SPP1-204ENST00000504310 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
SPP1-204ENST00000504310 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
SPP1-204ENST00000504310 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
SPP1-204ENST00000504310 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
SPP1-204ENST00000504310 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
SPP1-204ENST00000504310 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
SPP1-204ENST00000504310 ITGAEP38570 1179 aa11.93□□□□□ -0.5
SPP1-204ENST00000504310 CROCC2H7BZ55 1655 aa11.93□□□□□ -0.5
SPP1-204ENST00000504310 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms