RNA–Protein interactions for RNA: ENST00000504221.5

CAST-212, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-212ENST00000504221 ATMINO43313 823 aaPredicted RBP16.97■□□□□ 0.31
CAST-212ENST00000504221 PROM2Q8N271 834 aa16.96■□□□□ 0.31
CAST-212ENST00000504221 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
CAST-212ENST00000504221 METRNQ9UJH8 293 aa16.93■□□□□ 0.3
CAST-212ENST00000504221 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
CAST-212ENST00000504221 POTEMA6NI47 508 aa16.91■□□□□ 0.3
CAST-212ENST00000504221 C7P10643 843 aa16.91■□□□□ 0.3
CAST-212ENST00000504221 SLC39A7Q92504 469 aa16.9■□□□□ 0.3
CAST-212ENST00000504221 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
CAST-212ENST00000504221 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
CAST-212ENST00000504221 TSPYL2Q9H2G4 693 aaPredicted RBP16.83■□□□□ 0.28
CAST-212ENST00000504221 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
CAST-212ENST00000504221 ATN1P54259 1190 aaPredicted RBP16.78■□□□□ 0.28
CAST-212ENST00000504221 MAMSTRQ6ZN01 415 aa16.74■□□□□ 0.27
CAST-212ENST00000504221 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
CAST-212ENST00000504221 LCE2DQ5TA82 110 aaPredicted RBP16.7■□□□□ 0.26
CAST-212ENST00000504221 BMP2KQ9NSY1 1161 aaPredicted RBP16.69■□□□□ 0.26
CAST-212ENST00000504221 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
CAST-212ENST00000504221 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
CAST-212ENST00000504221 MAP3K13O43283 966 aa16.63■□□□□ 0.25
CAST-212ENST00000504221 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
CAST-212ENST00000504221 SCUBE2Q9NQ36 999 aa16.61■□□□□ 0.25
CAST-212ENST00000504221 TIE1P35590 1138 aa16.6■□□□□ 0.25
CAST-212ENST00000504221 MIER1Q8N108 512 aa16.57■□□□□ 0.24
CAST-212ENST00000504221 FAM163AQ96GL9 167 aaPredicted RBP16.56■□□□□ 0.24
CAST-212ENST00000504221 COLQQ9Y215 455 aaPredicted RBP16.51■□□□□ 0.23
CAST-212ENST00000504221 TTLL13PA6NNM8 815 aa16.5■□□□□ 0.23
CAST-212ENST00000504221 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
CAST-212ENST00000504221 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
CAST-212ENST00000504221 NUBP1P53384 320 aa16.39■□□□□ 0.21
CAST-212ENST00000504221 IER5LQ5T953 404 aa16.39■□□□□ 0.21
CAST-212ENST00000504221 SEC24BO95487 1268 aa16.38■□□□□ 0.21
CAST-212ENST00000504221 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
CAST-212ENST00000504221 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
CAST-212ENST00000504221 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
CAST-212ENST00000504221 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
CAST-212ENST00000504221 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
CAST-212ENST00000504221 CDAN1Q8IWY9 1227 aa16.21■□□□□ 0.19
CAST-212ENST00000504221 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
CAST-212ENST00000504221 SLAIN1Q8ND83 568 aa16.18■□□□□ 0.18
CAST-212ENST00000504221 ST18O60284 1047 aa16.17■□□□□ 0.18
CAST-212ENST00000504221 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
CAST-212ENST00000504221 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
CAST-212ENST00000504221 PLCG2P16885 1265 aa16.12■□□□□ 0.17
CAST-212ENST00000504221 OCEL1Q9H607 264 aa16.05■□□□□ 0.16
CAST-212ENST00000504221 PYGBP11216 843 aa15.99■□□□□ 0.15
CAST-212ENST00000504221 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
CAST-212ENST00000504221 FKBP8Q14318 412 aa15.96■□□□□ 0.15
CAST-212ENST00000504221 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
CAST-212ENST00000504221 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
CAST-212ENST00000504221 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.89■□□□□ 0.13
CAST-212ENST00000504221 SNPHO15079 494 aa15.87■□□□□ 0.13
CAST-212ENST00000504221 SPNS2Q8IVW8 549 aa15.87■□□□□ 0.13
CAST-212ENST00000504221 MMRN1Q13201 1228 aa15.86■□□□□ 0.13
CAST-212ENST00000504221 PDCD7Q8N8D1 485 aaKnown RBP15.85■□□□□ 0.13
CAST-212ENST00000504221 MARVELD3Q96A59 401 aa15.82■□□□□ 0.12
CAST-212ENST00000504221 FBXO3Q9UK99 471 aa15.78■□□□□ 0.12
CAST-212ENST00000504221 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
CAST-212ENST00000504221 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
CAST-212ENST00000504221 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
CAST-212ENST00000504221 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
CAST-212ENST00000504221 GSE1Q14687 1217 aa15.72■□□□□ 0.11
CAST-212ENST00000504221 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CAST-212ENST00000504221 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.11
CAST-212ENST00000504221 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
CAST-212ENST00000504221 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
CAST-212ENST00000504221 C3orf67Q6ZVT6 689 aa15.68■□□□□ 0.1
CAST-212ENST00000504221 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
CAST-212ENST00000504221 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
CAST-212ENST00000504221 PSEN1P49768 467 aa15.65■□□□□ 0.1
CAST-212ENST00000504221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAST-212ENST00000504221 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
CAST-212ENST00000504221 EMP3P54852 163 aa15.63■□□□□ 0.09
CAST-212ENST00000504221 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
CAST-212ENST00000504221 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
CAST-212ENST00000504221 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
CAST-212ENST00000504221 KRTAP3-3Q9BYR6 98 aa15.62■□□□□ 0.09
CAST-212ENST00000504221 KRTAP3-2Q9BYR7 98 aa15.62■□□□□ 0.09
CAST-212ENST00000504221 HS3ST6Q96QI5 342 aa15.58■□□□□ 0.08
CAST-212ENST00000504221 DPY19L2Q6NUT2 758 aa15.57■□□□□ 0.08
CAST-212ENST00000504221 FAM205CA6NFA0 338 aa15.54■□□□□ 0.08
CAST-212ENST00000504221 PDAP1Q13442 181 aaKnown RBP15.51■□□□□ 0.07
CAST-212ENST00000504221 HOXB3P14651 431 aaPredicted RBP15.49■□□□□ 0.07
CAST-212ENST00000504221 BOLA1Q9Y3E2 137 aa15.45■□□□□ 0.06
CAST-212ENST00000504221 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
CAST-212ENST00000504221 CUX2O14529 1486 aa15.41■□□□□ 0.06
CAST-212ENST00000504221 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
CAST-212ENST00000504221 HOXB1P14653 301 aaPredicted RBP15.37■□□□□ 0.05
CAST-212ENST00000504221 IFNLR1Q8IU57 520 aaPredicted RBP15.37■□□□□ 0.05
CAST-212ENST00000504221 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
CAST-212ENST00000504221 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
CAST-212ENST00000504221 G3V3G9 751 aa15.31■□□□□ 0.04
CAST-212ENST00000504221 NACADO15069 1562 aa15.28■□□□□ 0.04
CAST-212ENST00000504221 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
CAST-212ENST00000504221 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
CAST-212ENST00000504221 ERBB3P21860 1342 aa15.24■□□□□ 0.03
CAST-212ENST00000504221 EFCAB3Q8N7B9 438 aa15.23■□□□□ 0.03
CAST-212ENST00000504221 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
CAST-212ENST00000504221 TMEM92Q6UXU6 159 aa15.2■□□□□ 0.02
CAST-212ENST00000504221 VARS2Q5ST30 1063 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms