RNA–Protein interactions for RNA: ENST00000503498.1

EFCAB12-202, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 5,607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-202ENST00000503498 PODXL2Q9NZ53 605 aa14.43□□□□□ -0.1
EFCAB12-202ENST00000503498 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
EFCAB12-202ENST00000503498 ARID3AQ99856 593 aa14.4□□□□□ -0.1
EFCAB12-202ENST00000503498 GOLGA6L1Q8N7Z2 621 aa14.39□□□□□ -0.11
EFCAB12-202ENST00000503498 MYH16Q9H6N6 1097 aa14.39□□□□□ -0.11
EFCAB12-202ENST00000503498 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
EFCAB12-202ENST00000503498 FAM9BQ8IZU0 186 aa14.36□□□□□ -0.11
EFCAB12-202ENST00000503498 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
EFCAB12-202ENST00000503498 NOC3LQ8WTT2 800 aaKnown RBP14.33□□□□□ -0.12
EFCAB12-202ENST00000503498 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
EFCAB12-202ENST00000503498 PKNOX2Q96KN3 472 aa14.3□□□□□ -0.12
EFCAB12-202ENST00000503498 KIAA2012Q0VF49 1180 aa14.3□□□□□ -0.12
EFCAB12-202ENST00000503498 USP35Q9P2H5 1018 aa14.3□□□□□ -0.12
EFCAB12-202ENST00000503498 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
EFCAB12-202ENST00000503498 CASC1Q6TDU7 716 aa14.28□□□□□ -0.12
EFCAB12-202ENST00000503498 DRC7Q8IY82 874 aa14.28□□□□□ -0.12
EFCAB12-202ENST00000503498 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
EFCAB12-202ENST00000503498 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
EFCAB12-202ENST00000503498 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
EFCAB12-202ENST00000503498 ZNF771Q7L3S4 317 aaPredicted RBP14.21□□□□□ -0.14
EFCAB12-202ENST00000503498 GOLGA6L3A6NEY3 463 aa14.21□□□□□ -0.14
EFCAB12-202ENST00000503498 TMC1Q8TDI8 760 aa14.2□□□□□ -0.14
EFCAB12-202ENST00000503498 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
EFCAB12-202ENST00000503498 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
EFCAB12-202ENST00000503498 ZBTB7CA1YPR0 619 aa14.17□□□□□ -0.14
EFCAB12-202ENST00000503498 GOLGA6L4A6NEF3 574 aa14.16□□□□□ -0.14
EFCAB12-202ENST00000503498 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
EFCAB12-202ENST00000503498 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
EFCAB12-202ENST00000503498 MRS2Q9HD23 443 aa14.14□□□□□ -0.15
EFCAB12-202ENST00000503498 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
EFCAB12-202ENST00000503498 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
EFCAB12-202ENST00000503498 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
EFCAB12-202ENST00000503498 NOM1Q5C9Z4 860 aaKnown RBP14.12□□□□□ -0.15
EFCAB12-202ENST00000503498 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
EFCAB12-202ENST00000503498 MIER1Q8N108 512 aa14.07□□□□□ -0.16
EFCAB12-202ENST00000503498 PATL2C9JE40 543 aaKnown RBP14.06□□□□□ -0.16
EFCAB12-202ENST00000503498 GPS2Q13227 327 aa14.06□□□□□ -0.16
EFCAB12-202ENST00000503498 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
EFCAB12-202ENST00000503498 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
EFCAB12-202ENST00000503498 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
EFCAB12-202ENST00000503498 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
EFCAB12-202ENST00000503498 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
EFCAB12-202ENST00000503498 HTATSF1O43719 755 aaKnown RBP14.03□□□□□ -0.16
EFCAB12-202ENST00000503498 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
EFCAB12-202ENST00000503498 SYAP1Q96A49 352 aaPredicted RBP14.02□□□□□ -0.16
EFCAB12-202ENST00000503498 TPM4P67936 248 aa14□□□□□ -0.17
EFCAB12-202ENST00000503498 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
EFCAB12-202ENST00000503498 NEFHP12036 1026 aa13.99□□□□□ -0.17
EFCAB12-202ENST00000503498 RGS3P49796 1198 aa13.99□□□□□ -0.17
EFCAB12-202ENST00000503498 GZF1Q9H116 711 aaPredicted RBP13.98□□□□□ -0.17
EFCAB12-202ENST00000503498 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
EFCAB12-202ENST00000503498 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
EFCAB12-202ENST00000503498 FGD1P98174 961 aa13.96□□□□□ -0.17
EFCAB12-202ENST00000503498 RDXP35241 583 aaKnown RBP13.95□□□□□ -0.18
EFCAB12-202ENST00000503498 CCDC66A2RUB6 948 aa13.94□□□□□ -0.18
EFCAB12-202ENST00000503498 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
EFCAB12-202ENST00000503498 CLSTN1O94985 981 aa13.93□□□□□ -0.18
EFCAB12-202ENST00000503498 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
EFCAB12-202ENST00000503498 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
EFCAB12-202ENST00000503498 MCCP23508 829 aa13.92□□□□□ -0.18
EFCAB12-202ENST00000503498 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
EFCAB12-202ENST00000503498 PRM3Q9NNZ6 103 aa13.92□□□□□ -0.18
EFCAB12-202ENST00000503498 TPM3P06753 285 aa13.92□□□□□ -0.18
EFCAB12-202ENST00000503498 HMMRO75330 724 aa13.91□□□□□ -0.18
EFCAB12-202ENST00000503498 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
EFCAB12-202ENST00000503498 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
EFCAB12-202ENST00000503498 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
EFCAB12-202ENST00000503498 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
EFCAB12-202ENST00000503498 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
EFCAB12-202ENST00000503498 CHMP4BQ9H444 224 aaKnown RBP13.9□□□□□ -0.18
EFCAB12-202ENST00000503498 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
EFCAB12-202ENST00000503498 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
EFCAB12-202ENST00000503498 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
EFCAB12-202ENST00000503498 KCNJ4P48050 445 aa13.88□□□□□ -0.19
EFCAB12-202ENST00000503498 CCDC70Q6NSX1 233 aa13.87□□□□□ -0.19
EFCAB12-202ENST00000503498 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
EFCAB12-202ENST00000503498 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
EFCAB12-202ENST00000503498 PHF14O94880 888 aa13.85□□□□□ -0.19
EFCAB12-202ENST00000503498 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
EFCAB12-202ENST00000503498 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
EFCAB12-202ENST00000503498 PDE4CQ08493 712 aa13.83□□□□□ -0.19
EFCAB12-202ENST00000503498 MS4A1P11836 297 aa13.83□□□□□ -0.2
EFCAB12-202ENST00000503498 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
EFCAB12-202ENST00000503498 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
EFCAB12-202ENST00000503498 H0YHG0 523 aa13.82□□□□□ -0.2
EFCAB12-202ENST00000503498 GSE1Q14687 1217 aa13.82□□□□□ -0.2
EFCAB12-202ENST00000503498 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
EFCAB12-202ENST00000503498 CDR1P51861 262 aa13.8□□□□□ -0.2
EFCAB12-202ENST00000503498 ACBD3Q9H3P7 528 aa13.8□□□□□ -0.2
EFCAB12-202ENST00000503498 CEP89Q96ST8 783 aa13.8□□□□□ -0.2
EFCAB12-202ENST00000503498 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
EFCAB12-202ENST00000503498 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
EFCAB12-202ENST00000503498 AK7Q96M32 723 aa13.79□□□□□ -0.2
EFCAB12-202ENST00000503498 DDX11L8A8MPP1 907 aa13.78□□□□□ -0.2
EFCAB12-202ENST00000503498 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
EFCAB12-202ENST00000503498 ARGLU1Q9NWB6 273 aaPredicted RBP13.78□□□□□ -0.2
EFCAB12-202ENST00000503498 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.2
EFCAB12-202ENST00000503498 DCTN1Q14203 1278 aa13.77□□□□□ -0.2
EFCAB12-202ENST00000503498 TSHZ2Q9NRE2 1034 aa13.76□□□□□ -0.21
EFCAB12-202ENST00000503498 TPM2P07951 284 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms