RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 JPH4Q96JJ6 628 aa32.57■■■□□ 2.8
HERC6-204ENST00000502870 FAM69CQ0P6D2 419 aa32.55■■■□□ 2.8
HERC6-204ENST00000502870 MAPKBP1O60336 1514 aa32.54■■■□□ 2.8
HERC6-204ENST00000502870 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
HERC6-204ENST00000502870 DIP2BQ9P265 1576 aa32.49■■■□□ 2.79
HERC6-204ENST00000502870 KDM6BO15054 1643 aa32.43■■■□□ 2.78
HERC6-204ENST00000502870 ADCY10Q96PN6 1610 aa32.4■■■□□ 2.78
HERC6-204ENST00000502870 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
HERC6-204ENST00000502870 TSPOAP1O95153 1857 aa32.32■■■□□ 2.76
HERC6-204ENST00000502870 KDM4FA0A1W2PPD8 638 aa32.27■■■□□ 2.76
HERC6-204ENST00000502870 KIAA0586Q9BVV6 1533 aa32.25■■■□□ 2.75
HERC6-204ENST00000502870 CUL7Q14999 1698 aa32.16■■■□□ 2.74
HERC6-204ENST00000502870 PTPRGP23470 1445 aa32.08■■■□□ 2.73
HERC6-204ENST00000502870 ILDR1Q86SU0 546 aaPredicted RBP32.05■■■□□ 2.72
HERC6-204ENST00000502870 KIF27Q86VH2 1401 aa32.05■■■□□ 2.72
HERC6-204ENST00000502870 IGF1RP08069 1367 aa32.04■■■□□ 2.72
HERC6-204ENST00000502870 ABCC2Q92887 1545 aa32.03■■■□□ 2.72
HERC6-204ENST00000502870 CARMIL2Q6F5E8 1435 aa32.01■■■□□ 2.72
HERC6-204ENST00000502870 GLI2P10070 1586 aa32■■■□□ 2.71
HERC6-204ENST00000502870 PLB1Q6P1J6 1458 aa32■■■□□ 2.71
HERC6-204ENST00000502870 TNIKQ9UKE5 1360 aa31.97■■■□□ 2.71
HERC6-204ENST00000502870 PPRC1Q5VV67 1664 aaKnown RBP31.96■■■□□ 2.71
HERC6-204ENST00000502870 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
HERC6-204ENST00000502870 ADGRL1O94910 1474 aa31.95■■■□□ 2.7
HERC6-204ENST00000502870 TTBK1Q5TCY1 1321 aaPredicted RBP31.94■■■□□ 2.7
HERC6-204ENST00000502870 UHRF1BP1LA0JNW5 1464 aa31.89■■■□□ 2.7
HERC6-204ENST00000502870 IQGAP2Q13576 1575 aa31.87■■■□□ 2.69
HERC6-204ENST00000502870 CARMIL1Q5VZK9 1371 aa31.85■■■□□ 2.69
HERC6-204ENST00000502870 TEX14Q8IWB6 1497 aa31.82■■■□□ 2.68
HERC6-204ENST00000502870 UACAQ9BZF9 1416 aa31.82■■■□□ 2.68
HERC6-204ENST00000502870 MAP3K4Q9Y6R4 1608 aa31.8■■■□□ 2.68
HERC6-204ENST00000502870 EPRSP07814 1512 aaKnown RBP31.76■■■□□ 2.68
HERC6-204ENST00000502870 HECW2Q9P2P5 1572 aa31.75■■■□□ 2.67
HERC6-204ENST00000502870 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
HERC6-204ENST00000502870 COL17A1Q9UMD9 1497 aaPredicted RBP31.72■■■□□ 2.67
HERC6-204ENST00000502870 DISP1Q96F81 1524 aa31.7■■■□□ 2.66
HERC6-204ENST00000502870 ZCCHC11Q5TAX3 1644 aaKnown RBP31.68■■■□□ 2.66
HERC6-204ENST00000502870 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
HERC6-204ENST00000502870 KIAA0556O60303 1618 aa31.57■■■□□ 2.64
HERC6-204ENST00000502870 WDR7Q9Y4E6 1490 aa31.56■■■□□ 2.64
HERC6-204ENST00000502870 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
HERC6-204ENST00000502870 CFAP43Q8NDM7 1665 aa31.5■■■□□ 2.63
HERC6-204ENST00000502870 MAGI3Q5TCQ9 1506 aa31.45■■■□□ 2.63
HERC6-204ENST00000502870 CD109Q6YHK3 1445 aa31.43■■■□□ 2.62
HERC6-204ENST00000502870 CTTNBP2Q8WZ74 1663 aa31.37■■■□□ 2.61
HERC6-204ENST00000502870 GOLGA3Q08378 1498 aa31.36■■■□□ 2.61
HERC6-204ENST00000502870 KIF21BO75037 1637 aa31.34■■■□□ 2.61
HERC6-204ENST00000502870 KCNH8Q96L42 1107 aa31.32■■■□□ 2.6
HERC6-204ENST00000502870 ABCA8O94911 1581 aa31.3■■■□□ 2.6
HERC6-204ENST00000502870 FBXO41Q8TF61 875 aa31.28■■■□□ 2.6
HERC6-204ENST00000502870 ARAP3Q8WWN8 1544 aa31.24■■■□□ 2.59
HERC6-204ENST00000502870 FAM9AQ8IZU1 332 aaPredicted RBP31.19■■■□□ 2.58
HERC6-204ENST00000502870 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
HERC6-204ENST00000502870 PTPRMP28827 1452 aa31.13■■■□□ 2.57
HERC6-204ENST00000502870 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
HERC6-204ENST00000502870 ABCA9Q8IUA7 1624 aa31.08■■■□□ 2.57
HERC6-204ENST00000502870 BCORL1Q5H9F3 1711 aa31.01■■■□□ 2.55
HERC6-204ENST00000502870 ATP10BO94823 1461 aa31.01■■■□□ 2.55
HERC6-204ENST00000502870 NEO1Q92859 1461 aa31.01■■■□□ 2.55
HERC6-204ENST00000502870 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
HERC6-204ENST00000502870 ARID3CA6NKF2 412 aa30.97■■■□□ 2.55
HERC6-204ENST00000502870 PRXQ9BXM0 1461 aa30.96■■■□□ 2.55
HERC6-204ENST00000502870 MADDQ8WXG6 1647 aa30.95■■■□□ 2.55
HERC6-204ENST00000502870 RAPGEF3O95398 923 aa30.94■■■□□ 2.54
HERC6-204ENST00000502870 ARID4BQ4LE39 1312 aaPredicted RBP30.94■■■□□ 2.54
HERC6-204ENST00000502870 LMTK3Q96Q04 1460 aa30.89■■■□□ 2.54
HERC6-204ENST00000502870 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
HERC6-204ENST00000502870 RAPGEF6Q8TEU7 1601 aa30.87■■■□□ 2.53
HERC6-204ENST00000502870 P3H3Q8IVL6 736 aa30.85■■■□□ 2.53
HERC6-204ENST00000502870 ARHGEF40Q8TER5 1519 aa30.84■■■□□ 2.53
HERC6-204ENST00000502870 RIMS1Q86UR5 1692 aaKnown RBP30.84■■■□□ 2.53
HERC6-204ENST00000502870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.83■■■□□ 2.53
HERC6-204ENST00000502870 HNRNPUL2Q1KMD3 747 aaKnown RBP30.83■■■□□ 2.53
HERC6-204ENST00000502870 SAMD9Q5K651 1589 aa30.82■■■□□ 2.52
HERC6-204ENST00000502870 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.52
HERC6-204ENST00000502870 POGZQ7Z3K3 1410 aa30.76■■■□□ 2.51
HERC6-204ENST00000502870 DENND4BO75064 1496 aaPredicted RBP30.76■■■□□ 2.51
HERC6-204ENST00000502870 RICTORQ6R327 1708 aa30.76■■■□□ 2.51
HERC6-204ENST00000502870 FANCAO15360 1455 aa30.73■■■□□ 2.51
HERC6-204ENST00000502870 NUP153P49790 1475 aaKnown RBP30.7■■■□□ 2.5
HERC6-204ENST00000502870 AKNAQ7Z591 1439 aa30.69■■■□□ 2.5
HERC6-204ENST00000502870 FHOD3Q2V2M9 1422 aa30.68■■■□□ 2.5
HERC6-204ENST00000502870 EFCAB5A4FU69 1503 aa30.65■■■□□ 2.5
HERC6-204ENST00000502870 ZMYM4Q5VZL5 1548 aa30.65■■■□□ 2.5
HERC6-204ENST00000502870 HSPA2P54652 639 aa30.65■■■□□ 2.5
HERC6-204ENST00000502870 PLEKHD1A6NEE1 506 aa30.64■■■□□ 2.5
HERC6-204ENST00000502870 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
HERC6-204ENST00000502870 CERKQ8TCT0 537 aa30.61■■■□□ 2.49
HERC6-204ENST00000502870 FER1L4A9Z1Z3 1794 aa30.6■■■□□ 2.49
HERC6-204ENST00000502870 PLPPR3Q6T4P5 718 aa30.6■■■□□ 2.49
HERC6-204ENST00000502870 MAGI2Q86UL8 1455 aa30.6■■■□□ 2.49
HERC6-204ENST00000502870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.57■■■□□ 2.48
HERC6-204ENST00000502870 TTC37Q6PGP7 1564 aa30.55■■■□□ 2.48
HERC6-204ENST00000502870 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
HERC6-204ENST00000502870 YEATS2Q9ULM3 1422 aa30.52■■■□□ 2.48
HERC6-204ENST00000502870 SIGLEC1Q9BZZ2 1709 aa30.52■■■□□ 2.48
HERC6-204ENST00000502870 HECW1Q76N89 1606 aa30.49■■■□□ 2.47
HERC6-204ENST00000502870 PREX1Q8TCU6 1659 aa30.49■■■□□ 2.47
HERC6-204ENST00000502870 MLECQ14165 292 aa30.47■■■□□ 2.47
HERC6-204ENST00000502870 RANGAP1P46060 587 aaPredicted RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms