RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 NCAPD3P42695 1498 aa9.66□□□□□ -0.86
PTPN20-212ENST00000502254 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
PTPN20-212ENST00000502254 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
PTPN20-212ENST00000502254 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
PTPN20-212ENST00000502254 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
PTPN20-212ENST00000502254 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
PTPN20-212ENST00000502254 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
PTPN20-212ENST00000502254 CCDC88BA6NC98 1476 aa9.58□□□□□ -0.88
PTPN20-212ENST00000502254 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
PTPN20-212ENST00000502254 RGL2O15211 777 aa9.55□□□□□ -0.88
PTPN20-212ENST00000502254 NPM1P06748 294 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPN20-212ENST00000502254 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
PTPN20-212ENST00000502254 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
PTPN20-212ENST00000502254 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
PTPN20-212ENST00000502254 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
PTPN20-212ENST00000502254 NUBP1P53384 320 aa9.48□□□□□ -0.89
PTPN20-212ENST00000502254 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
PTPN20-212ENST00000502254 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
PTPN20-212ENST00000502254 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
PTPN20-212ENST00000502254 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.9
PTPN20-212ENST00000502254 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-212ENST00000502254 GSE1Q14687 1217 aa9.44□□□□□ -0.9
PTPN20-212ENST00000502254 CADPSQ9ULU8 1353 aa9.43□□□□□ -0.9
PTPN20-212ENST00000502254 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
PTPN20-212ENST00000502254 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
PTPN20-212ENST00000502254 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
PTPN20-212ENST00000502254 CFTRP13569 1480 aa9.4□□□□□ -0.9
PTPN20-212ENST00000502254 NESP48681 1621 aa9.4□□□□□ -0.9
PTPN20-212ENST00000502254 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
PTPN20-212ENST00000502254 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
PTPN20-212ENST00000502254 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
PTPN20-212ENST00000502254 DNAJC5Q9H3Z4 198 aa9.37□□□□□ -0.91
PTPN20-212ENST00000502254 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
PTPN20-212ENST00000502254 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
PTPN20-212ENST00000502254 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
PTPN20-212ENST00000502254 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
PTPN20-212ENST00000502254 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
PTPN20-212ENST00000502254 CFAP44Q96MT7 982 aa9.34□□□□□ -0.91
PTPN20-212ENST00000502254 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
PTPN20-212ENST00000502254 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
PTPN20-212ENST00000502254 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
PTPN20-212ENST00000502254 FANCD2Q9BXW9 1451 aa9.32□□□□□ -0.92
PTPN20-212ENST00000502254 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
PTPN20-212ENST00000502254 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
PTPN20-212ENST00000502254 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
PTPN20-212ENST00000502254 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
PTPN20-212ENST00000502254 WRNQ14191 1432 aaPredicted RBP eCLIP9.29□□□□□ -0.92
PTPN20-212ENST00000502254 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
PTPN20-212ENST00000502254 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
PTPN20-212ENST00000502254 SGIP1Q9BQI5 828 aa9.27□□□□□ -0.93
PTPN20-212ENST00000502254 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
PTPN20-212ENST00000502254 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
PTPN20-212ENST00000502254 BCANQ96GW7 911 aa9.26□□□□□ -0.93
PTPN20-212ENST00000502254 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
PTPN20-212ENST00000502254 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
PTPN20-212ENST00000502254 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
PTPN20-212ENST00000502254 CUX1P39880 1505 aa9.22□□□□□ -0.93
PTPN20-212ENST00000502254 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
PTPN20-212ENST00000502254 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
PTPN20-212ENST00000502254 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
PTPN20-212ENST00000502254 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-212ENST00000502254 MRC2Q9UBG0 1479 aa9.2□□□□□ -0.94
PTPN20-212ENST00000502254 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-212ENST00000502254 TOPBP1Q92547 1522 aa9.19□□□□□ -0.94
PTPN20-212ENST00000502254 TOP2BQ02880 1626 aa9.19□□□□□ -0.94
PTPN20-212ENST00000502254 PYGBP11216 843 aa9.18□□□□□ -0.94
PTPN20-212ENST00000502254 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
PTPN20-212ENST00000502254 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
PTPN20-212ENST00000502254 STK25O00506 426 aa9.17□□□□□ -0.94
PTPN20-212ENST00000502254 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
PTPN20-212ENST00000502254 BIVM-ERCC5R4GMW8 1640 aa9.16□□□□□ -0.94
PTPN20-212ENST00000502254 FGD5Q6ZNL6 1462 aa9.16□□□□□ -0.94
PTPN20-212ENST00000502254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
PTPN20-212ENST00000502254 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
PTPN20-212ENST00000502254 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN20-212ENST00000502254 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
PTPN20-212ENST00000502254 SOGA1O94964 1423 aa9.14□□□□□ -0.95
PTPN20-212ENST00000502254 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
PTPN20-212ENST00000502254 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
PTPN20-212ENST00000502254 WDR62O43379 1518 aa9.11□□□□□ -0.95
PTPN20-212ENST00000502254 STK24Q9Y6E0 443 aa9.11□□□□□ -0.95
PTPN20-212ENST00000502254 THOC2Q8NI27 1593 aaKnown RBP9.11□□□□□ -0.95
PTPN20-212ENST00000502254 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
PTPN20-212ENST00000502254 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
PTPN20-212ENST00000502254 CUX2O14529 1486 aa9.09□□□□□ -0.95
PTPN20-212ENST00000502254 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
PTPN20-212ENST00000502254 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
PTPN20-212ENST00000502254 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
PTPN20-212ENST00000502254 RYDENQ9NUL5 291 aaKnown RBP9.08□□□□□ -0.96
PTPN20-212ENST00000502254 TDRD9Q8NDG6 1382 aaKnown RBP9.08□□□□□ -0.96
PTPN20-212ENST00000502254 KIF27Q86VH2 1401 aa9.07□□□□□ -0.96
PTPN20-212ENST00000502254 IFT140Q96RY7 1462 aa9.07□□□□□ -0.96
PTPN20-212ENST00000502254 LOC105371045A0A1W2PR82 267 aa9.06□□□□□ -0.96
PTPN20-212ENST00000502254 EEA1Q15075 1411 aa9.05□□□□□ -0.96
PTPN20-212ENST00000502254 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
PTPN20-212ENST00000502254 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
PTPN20-212ENST00000502254 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPN20-212ENST00000502254 ZNF579Q8NAF0 562 aaKnown RBP9.03□□□□□ -0.96
PTPN20-212ENST00000502254 TARBP1Q13395 1621 aaKnown RBP9.02□□□□□ -0.96
PTPN20-212ENST00000502254 IGF1RP08069 1367 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms