RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
HDAC6-236ENST00000498808 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
HDAC6-236ENST00000498808 FAM69CQ0P6D2 419 aa28.28■■■□□ 2.12
HDAC6-236ENST00000498808 MAPKBP1O60336 1514 aa28.26■■■□□ 2.11
HDAC6-236ENST00000498808 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
HDAC6-236ENST00000498808 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
HDAC6-236ENST00000498808 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
HDAC6-236ENST00000498808 KDM6BO15054 1643 aa28.13■■■□□ 2.09
HDAC6-236ENST00000498808 KDM4FA0A1W2PPD8 638 aa28.11■■■□□ 2.09
HDAC6-236ENST00000498808 TSPOAP1O95153 1857 aa28.05■■■□□ 2.08
HDAC6-236ENST00000498808 KIAA0586Q9BVV6 1533 aa28.04■■■□□ 2.08
HDAC6-236ENST00000498808 IGF1RP08069 1367 aa27.94■■■□□ 2.06
HDAC6-236ENST00000498808 CUL7Q14999 1698 aa27.91■■■□□ 2.06
HDAC6-236ENST00000498808 PTPRGP23470 1445 aa27.88■■■□□ 2.05
HDAC6-236ENST00000498808 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
HDAC6-236ENST00000498808 PPRC1Q5VV67 1664 aaKnown RBP27.84■■■□□ 2.05
HDAC6-236ENST00000498808 ABCC2Q92887 1545 aa27.83■■■□□ 2.05
HDAC6-236ENST00000498808 ILDR1Q86SU0 546 aaPredicted RBP27.83■■■□□ 2.05
HDAC6-236ENST00000498808 TTBK1Q5TCY1 1321 aaPredicted RBP27.8■■■□□ 2.04
HDAC6-236ENST00000498808 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
HDAC6-236ENST00000498808 GLI2P10070 1586 aa27.79■■■□□ 2.04
HDAC6-236ENST00000498808 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
HDAC6-236ENST00000498808 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.04
HDAC6-236ENST00000498808 ADGRL1O94910 1474 aa27.75■■■□□ 2.03
HDAC6-236ENST00000498808 CARMIL2Q6F5E8 1435 aa27.75■■■□□ 2.03
HDAC6-236ENST00000498808 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
HDAC6-236ENST00000498808 UHRF1BP1LA0JNW5 1464 aa27.71■■■□□ 2.03
HDAC6-236ENST00000498808 COL17A1Q9UMD9 1497 aaPredicted RBP27.7■■■□□ 2.02
HDAC6-236ENST00000498808 IQGAP2Q13576 1575 aa27.69■■■□□ 2.02
HDAC6-236ENST00000498808 UACAQ9BZF9 1416 aa27.66■■■□□ 2.02
HDAC6-236ENST00000498808 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
HDAC6-236ENST00000498808 EPRSP07814 1512 aaKnown RBP27.63■■■□□ 2.01
HDAC6-236ENST00000498808 DISP1Q96F81 1524 aa27.63■■■□□ 2.01
HDAC6-236ENST00000498808 KDM5BQ9UGL1 1544 aa27.61■■■□□ 2.01
HDAC6-236ENST00000498808 HECW2Q9P2P5 1572 aa27.56■■■□□ 2
HDAC6-236ENST00000498808 TEX14Q8IWB6 1497 aa27.55■■■□□ 2
HDAC6-236ENST00000498808 ZCCHC11Q5TAX3 1644 aaKnown RBP27.55■■■□□ 2
HDAC6-236ENST00000498808 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
HDAC6-236ENST00000498808 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
HDAC6-236ENST00000498808 WDR7Q9Y4E6 1490 aa27.43■■□□□ 1.98
HDAC6-236ENST00000498808 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
HDAC6-236ENST00000498808 MAGI3Q5TCQ9 1506 aa27.33■■□□□ 1.97
HDAC6-236ENST00000498808 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
HDAC6-236ENST00000498808 CD109Q6YHK3 1445 aa27.31■■□□□ 1.96
HDAC6-236ENST00000498808 ABCA8O94911 1581 aa27.26■■□□□ 1.96
HDAC6-236ENST00000498808 KIF21BO75037 1637 aa27.24■■□□□ 1.95
HDAC6-236ENST00000498808 CTTNBP2Q8WZ74 1663 aa27.24■■□□□ 1.95
HDAC6-236ENST00000498808 KCNH8Q96L42 1107 aa27.23■■□□□ 1.95
HDAC6-236ENST00000498808 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
HDAC6-236ENST00000498808 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
HDAC6-236ENST00000498808 FBXO41Q8TF61 875 aa27.09■■□□□ 1.93
HDAC6-236ENST00000498808 ADAMTSL3P82987 1691 aa27.06■■□□□ 1.92
HDAC6-236ENST00000498808 PTPRMP28827 1452 aa27.04■■□□□ 1.92
HDAC6-236ENST00000498808 ATP10BO94823 1461 aa27.02■■□□□ 1.92
HDAC6-236ENST00000498808 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
HDAC6-236ENST00000498808 PRXQ9BXM0 1461 aa27.01■■□□□ 1.91
HDAC6-236ENST00000498808 ABCA9Q8IUA7 1624 aa27.01■■□□□ 1.91
HDAC6-236ENST00000498808 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
HDAC6-236ENST00000498808 RAPGEF3O95398 923 aa26.95■■□□□ 1.9
HDAC6-236ENST00000498808 BCORL1Q5H9F3 1711 aa26.93■■□□□ 1.9
HDAC6-236ENST00000498808 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
HDAC6-236ENST00000498808 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
HDAC6-236ENST00000498808 NEO1Q92859 1461 aa26.91■■□□□ 1.9
HDAC6-236ENST00000498808 MADDQ8WXG6 1647 aa26.9■■□□□ 1.9
HDAC6-236ENST00000498808 PCF11O94913 1555 aaKnown RBP26.89■■□□□ 1.9
HDAC6-236ENST00000498808 LMTK3Q96Q04 1460 aa26.87■■□□□ 1.89
HDAC6-236ENST00000498808 FAM9AQ8IZU1 332 aaPredicted RBP26.84■■□□□ 1.89
HDAC6-236ENST00000498808 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
HDAC6-236ENST00000498808 RAPGEF6Q8TEU7 1601 aa26.83■■□□□ 1.89
HDAC6-236ENST00000498808 ARID4BQ4LE39 1312 aaPredicted RBP26.82■■□□□ 1.88
HDAC6-236ENST00000498808 ARHGEF40Q8TER5 1519 aa26.79■■□□□ 1.88
HDAC6-236ENST00000498808 RIMS1Q86UR5 1692 aaKnown RBP26.79■■□□□ 1.88
HDAC6-236ENST00000498808 NUP153P49790 1475 aaKnown RBP26.75■■□□□ 1.87
HDAC6-236ENST00000498808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
HDAC6-236ENST00000498808 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
HDAC6-236ENST00000498808 RICTORQ6R327 1708 aa26.74■■□□□ 1.87
HDAC6-236ENST00000498808 DENND4BO75064 1496 aaPredicted RBP26.71■■□□□ 1.87
HDAC6-236ENST00000498808 HSPA2P54652 639 aa26.69■■□□□ 1.86
HDAC6-236ENST00000498808 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
HDAC6-236ENST00000498808 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
HDAC6-236ENST00000498808 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
HDAC6-236ENST00000498808 FANCAO15360 1455 aa26.64■■□□□ 1.86
HDAC6-236ENST00000498808 ZMYM4Q5VZL5 1548 aa26.64■■□□□ 1.85
HDAC6-236ENST00000498808 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
HDAC6-236ENST00000498808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.61■■□□□ 1.85
HDAC6-236ENST00000498808 PLPPR3Q6T4P5 718 aa26.61■■□□□ 1.85
HDAC6-236ENST00000498808 YEATS2Q9ULM3 1422 aa26.61■■□□□ 1.85
HDAC6-236ENST00000498808 POGZQ7Z3K3 1410 aa26.6■■□□□ 1.85
HDAC6-236ENST00000498808 PLEKHD1A6NEE1 506 aa26.6■■□□□ 1.85
HDAC6-236ENST00000498808 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
HDAC6-236ENST00000498808 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
HDAC6-236ENST00000498808 TTC37Q6PGP7 1564 aa26.59■■□□□ 1.85
HDAC6-236ENST00000498808 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.85
HDAC6-236ENST00000498808 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
HDAC6-236ENST00000498808 CERKQ8TCT0 537 aa26.55■■□□□ 1.84
HDAC6-236ENST00000498808 MAGI2Q86UL8 1455 aa26.54■■□□□ 1.84
HDAC6-236ENST00000498808 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
HDAC6-236ENST00000498808 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
HDAC6-236ENST00000498808 MLECQ14165 292 aa26.5■■□□□ 1.83
HDAC6-236ENST00000498808 SCAPERQ9BY12 1400 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms