RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
PBX1-211ENST00000498497 NAP1L5Q96NT1 182 aaPredicted RBP15.94■□□□□ 0.14
PBX1-211ENST00000498497 SLC4A3P48751 1232 aa15.93■□□□□ 0.14
PBX1-211ENST00000498497 RBM10P98175 930 aaKnown RBP15.91■□□□□ 0.14
PBX1-211ENST00000498497 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
PBX1-211ENST00000498497 FRAT1Q92837 279 aaPredicted RBP15.9■□□□□ 0.14
PBX1-211ENST00000498497 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
PBX1-211ENST00000498497 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
PBX1-211ENST00000498497 GSE1Q14687 1217 aa15.85■□□□□ 0.13
PBX1-211ENST00000498497 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
PBX1-211ENST00000498497 PDE4CQ08493 712 aa15.84■□□□□ 0.13
PBX1-211ENST00000498497 ARID3AQ99856 593 aa15.83■□□□□ 0.12
PBX1-211ENST00000498497 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
PBX1-211ENST00000498497 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
PBX1-211ENST00000498497 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
PBX1-211ENST00000498497 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
PBX1-211ENST00000498497 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
PBX1-211ENST00000498497 SKAP1Q86WV1 359 aa15.75■□□□□ 0.11
PBX1-211ENST00000498497 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
PBX1-211ENST00000498497 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
PBX1-211ENST00000498497 HSP90AA1P07900 732 aaKnown RBP15.72■□□□□ 0.11
PBX1-211ENST00000498497 RGS3P49796 1198 aa15.72■□□□□ 0.11
PBX1-211ENST00000498497 AAMPQ13685 434 aa15.72■□□□□ 0.11
PBX1-211ENST00000498497 NFKBIBQ15653 356 aa15.71■□□□□ 0.11
PBX1-211ENST00000498497 RRAGDQ9NQL2 400 aaPredicted RBP15.71■□□□□ 0.11
PBX1-211ENST00000498497 FGD1P98174 961 aa15.71■□□□□ 0.11
PBX1-211ENST00000498497 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
PBX1-211ENST00000498497 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
PBX1-211ENST00000498497 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
PBX1-211ENST00000498497 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
PBX1-211ENST00000498497 FRAT2O75474 233 aaPredicted RBP15.65■□□□□ 0.1
PBX1-211ENST00000498497 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.09
PBX1-211ENST00000498497 CCER2I3L3R5 266 aa15.63■□□□□ 0.09
PBX1-211ENST00000498497 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
PBX1-211ENST00000498497 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
PBX1-211ENST00000498497 WRNQ14191 1432 aaPredicted RBP eCLIP15.61■□□□□ 0.099e-6■■■■■ 50.1
PBX1-211ENST00000498497 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
PBX1-211ENST00000498497 NACADO15069 1562 aa15.57■□□□□ 0.08
PBX1-211ENST00000498497 PDE4AP27815 886 aa15.56■□□□□ 0.08
PBX1-211ENST00000498497 AKNAQ7Z591 1439 aa15.56■□□□□ 0.08
PBX1-211ENST00000498497 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
PBX1-211ENST00000498497 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
PBX1-211ENST00000498497 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
PBX1-211ENST00000498497 GZF1Q9H116 711 aaPredicted RBP15.53■□□□□ 0.08
PBX1-211ENST00000498497 POGKQ9P215 609 aa15.53■□□□□ 0.08
PBX1-211ENST00000498497 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.08
PBX1-211ENST00000498497 RRP9O43818 475 aaKnown RBP15.52■□□□□ 0.07
PBX1-211ENST00000498497 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
PBX1-211ENST00000498497 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
PBX1-211ENST00000498497 SOGA1O94964 1423 aa15.51■□□□□ 0.07
PBX1-211ENST00000498497 PAXIP1Q6ZW49 1069 aaPredicted RBP15.51■□□□□ 0.07
PBX1-211ENST00000498497 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
PBX1-211ENST00000498497 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
PBX1-211ENST00000498497 PRDM10Q9NQV6 1147 aa15.49■□□□□ 0.07
PBX1-211ENST00000498497 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
PBX1-211ENST00000498497 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
PBX1-211ENST00000498497 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
PBX1-211ENST00000498497 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
PBX1-211ENST00000498497 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
PBX1-211ENST00000498497 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
PBX1-211ENST00000498497 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
PBX1-211ENST00000498497 EXOC6Q8TAG9 804 aa15.41■□□□□ 0.06
PBX1-211ENST00000498497 RUSC2Q8N2Y8 1516 aa15.41■□□□□ 0.06
PBX1-211ENST00000498497 VGLL3A8MV65 326 aa15.39■□□□□ 0.05
PBX1-211ENST00000498497 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
PBX1-211ENST00000498497 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
PBX1-211ENST00000498497 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
PBX1-211ENST00000498497 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
PBX1-211ENST00000498497 NAP1L2Q9ULW6 460 aaPredicted RBP15.37■□□□□ 0.05
PBX1-211ENST00000498497 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
PBX1-211ENST00000498497 FAM50AQ14320 339 aaKnown RBP15.35■□□□□ 0.05
PBX1-211ENST00000498497 FOXD1Q16676 465 aa15.34■□□□□ 0.05
PBX1-211ENST00000498497 CLIP1P30622 1438 aa15.33■□□□□ 0.04
PBX1-211ENST00000498497 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
PBX1-211ENST00000498497 PRDM4Q9UKN5 801 aa15.33■□□□□ 0.04
PBX1-211ENST00000498497 EEA1Q15075 1411 aa15.32■□□□□ 0.04
PBX1-211ENST00000498497 PLIN1O60240 522 aa15.31■□□□□ 0.04
PBX1-211ENST00000498497 RAB3GAP2Q9H2M9 1393 aa15.31■□□□□ 0.04
PBX1-211ENST00000498497 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
PBX1-211ENST00000498497 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
PBX1-211ENST00000498497 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
PBX1-211ENST00000498497 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
PBX1-211ENST00000498497 ATP1B4Q9UN42 357 aaPredicted RBP15.26■□□□□ 0.03
PBX1-211ENST00000498497 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
PBX1-211ENST00000498497 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
PBX1-211ENST00000498497 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
PBX1-211ENST00000498497 CLCN1P35523 988 aa15.22■□□□□ 0.03
PBX1-211ENST00000498497 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
PBX1-211ENST00000498497 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
PBX1-211ENST00000498497 GOLGA6L3A6NEY3 463 aa15.21■□□□□ 0.03
PBX1-211ENST00000498497 ERBB4Q15303 1308 aa15.21■□□□□ 0.03
PBX1-211ENST00000498497 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
PBX1-211ENST00000498497 TRIM44Q96DX7 344 aaPredicted RBP15.21■□□□□ 0.02
PBX1-211ENST00000498497 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
PBX1-211ENST00000498497 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
PBX1-211ENST00000498497 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
PBX1-211ENST00000498497 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
PBX1-211ENST00000498497 ESPNB1AK53 854 aa15.17■□□□□ 0.02
PBX1-211ENST00000498497 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
PBX1-211ENST00000498497 E9PSI1 815 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms