RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
RC3H2-210ENST00000498479 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
RC3H2-210ENST00000498479 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
RC3H2-210ENST00000498479 KIF27Q86VH2 1401 aa15.96■□□□□ 0.14
RC3H2-210ENST00000498479 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
RC3H2-210ENST00000498479 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
RC3H2-210ENST00000498479 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
RC3H2-210ENST00000498479 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
RC3H2-210ENST00000498479 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
RC3H2-210ENST00000498479 DEKP35659 375 aaKnown RBP15.9■□□□□ 0.14
RC3H2-210ENST00000498479 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
RC3H2-210ENST00000498479 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
RC3H2-210ENST00000498479 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
RC3H2-210ENST00000498479 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
RC3H2-210ENST00000498479 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
RC3H2-210ENST00000498479 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
RC3H2-210ENST00000498479 WIZO95785 1651 aa15.86■□□□□ 0.13
RC3H2-210ENST00000498479 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
RC3H2-210ENST00000498479 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.13
RC3H2-210ENST00000498479 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.13
RC3H2-210ENST00000498479 RAB3GAP2Q9H2M9 1393 aa15.83■□□□□ 0.12
RC3H2-210ENST00000498479 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
RC3H2-210ENST00000498479 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
RC3H2-210ENST00000498479 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
RC3H2-210ENST00000498479 RRP7BPQ9NSQ0 103 aa15.81■□□□□ 0.12
RC3H2-210ENST00000498479 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
RC3H2-210ENST00000498479 NEFMP07197 916 aa15.77■□□□□ 0.12
RC3H2-210ENST00000498479 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.11
RC3H2-210ENST00000498479 ANP32BQ92688 251 aaKnown RBP15.77■□□□□ 0.11
RC3H2-210ENST00000498479 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
RC3H2-210ENST00000498479 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.113e-17■□□□□ 9.7
RC3H2-210ENST00000498479 BECN1Q14457 450 aa15.72■□□□□ 0.11
RC3H2-210ENST00000498479 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
RC3H2-210ENST00000498479 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
RC3H2-210ENST00000498479 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
RC3H2-210ENST00000498479 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
RC3H2-210ENST00000498479 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
RC3H2-210ENST00000498479 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
RC3H2-210ENST00000498479 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
RC3H2-210ENST00000498479 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
RC3H2-210ENST00000498479 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
RC3H2-210ENST00000498479 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
RC3H2-210ENST00000498479 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
RC3H2-210ENST00000498479 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
RC3H2-210ENST00000498479 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
RC3H2-210ENST00000498479 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
RC3H2-210ENST00000498479 CARD11Q9BXL7 1154 aa15.59■□□□□ 0.09
RC3H2-210ENST00000498479 CUX2O14529 1486 aa15.59■□□□□ 0.09
RC3H2-210ENST00000498479 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
RC3H2-210ENST00000498479 FBLN2P98095 1184 aa15.57■□□□□ 0.08
RC3H2-210ENST00000498479 ARXQ96QS3 562 aa15.56■□□□□ 0.08
RC3H2-210ENST00000498479 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
RC3H2-210ENST00000498479 USP35Q9P2H5 1018 aa15.55■□□□□ 0.08
RC3H2-210ENST00000498479 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
RC3H2-210ENST00000498479 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
RC3H2-210ENST00000498479 SENP3-EIF4A1A0A087X0R7 540 aa15.54■□□□□ 0.08
RC3H2-210ENST00000498479 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
RC3H2-210ENST00000498479 KIF21BO75037 1637 aa15.52■□□□□ 0.08
RC3H2-210ENST00000498479 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.07
RC3H2-210ENST00000498479 RCAN3Q9UKA8 241 aa15.49■□□□□ 0.07
RC3H2-210ENST00000498479 L1TD1Q5T7N2 865 aaKnown RBP15.49■□□□□ 0.07
RC3H2-210ENST00000498479 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
RC3H2-210ENST00000498479 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
RC3H2-210ENST00000498479 RGS3P49796 1198 aa15.47■□□□□ 0.07
RC3H2-210ENST00000498479 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
RC3H2-210ENST00000498479 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
RC3H2-210ENST00000498479 RALBP1Q15311 655 aa15.46■□□□□ 0.07
RC3H2-210ENST00000498479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■□□□□ 10.3
RC3H2-210ENST00000498479 RRBP1Q9P2E9 1410 aaKnown RBP15.46■□□□□ 0.07
RC3H2-210ENST00000498479 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
RC3H2-210ENST00000498479 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
RC3H2-210ENST00000498479 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
RC3H2-210ENST00000498479 PDE3BQ13370 1112 aa15.43■□□□□ 0.06
RC3H2-210ENST00000498479 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
RC3H2-210ENST00000498479 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
RC3H2-210ENST00000498479 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
RC3H2-210ENST00000498479 RGL3Q3MIN7 710 aa15.38■□□□□ 0.05
RC3H2-210ENST00000498479 CCDC18Q5T9S5 1454 aa15.38■□□□□ 0.05
RC3H2-210ENST00000498479 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
RC3H2-210ENST00000498479 CC2D1BQ5T0F9 858 aaKnown RBP15.37■□□□□ 0.05
RC3H2-210ENST00000498479 MS4A1P11836 297 aa15.36■□□□□ 0.05
RC3H2-210ENST00000498479 PDE4AP27815 886 aa15.36■□□□□ 0.05
RC3H2-210ENST00000498479 TMF1P82094 1093 aa15.36■□□□□ 0.05
RC3H2-210ENST00000498479 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
RC3H2-210ENST00000498479 FOXD1Q16676 465 aa15.35■□□□□ 0.05
RC3H2-210ENST00000498479 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
RC3H2-210ENST00000498479 DCAF11Q8TEB1 546 aa15.34■□□□□ 0.05
RC3H2-210ENST00000498479 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
RC3H2-210ENST00000498479 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
RC3H2-210ENST00000498479 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
RC3H2-210ENST00000498479 GSE1Q14687 1217 aa15.33■□□□□ 0.04
RC3H2-210ENST00000498479 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
RC3H2-210ENST00000498479 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
RC3H2-210ENST00000498479 CNTLNQ9NXG0 1405 aa15.32■□□□□ 0.04
RC3H2-210ENST00000498479 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
RC3H2-210ENST00000498479 KIF15Q9NS87 1388 aa15.32■□□□□ 0.04
RC3H2-210ENST00000498479 ARID4BQ4LE39 1312 aaPredicted RBP15.31■□□□□ 0.04
RC3H2-210ENST00000498479 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
RC3H2-210ENST00000498479 PKD2Q13563 968 aa15.31■□□□□ 0.04
RC3H2-210ENST00000498479 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms