RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
TOM1-217ENST00000497448 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
TOM1-217ENST00000497448 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
TOM1-217ENST00000497448 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
TOM1-217ENST00000497448 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
TOM1-217ENST00000497448 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
TOM1-217ENST00000497448 TSPOAP1O95153 1857 aa19.3■□□□□ 0.68
TOM1-217ENST00000497448 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
TOM1-217ENST00000497448 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
TOM1-217ENST00000497448 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
TOM1-217ENST00000497448 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
TOM1-217ENST00000497448 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.65
TOM1-217ENST00000497448 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
TOM1-217ENST00000497448 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
TOM1-217ENST00000497448 GLI2P10070 1586 aa19.03■□□□□ 0.64
TOM1-217ENST00000497448 ABCC2Q92887 1545 aa19■□□□□ 0.63
TOM1-217ENST00000497448 CUL7Q14999 1698 aa18.99■□□□□ 0.63
TOM1-217ENST00000497448 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
TOM1-217ENST00000497448 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
TOM1-217ENST00000497448 COL17A1Q9UMD9 1497 aaPredicted RBP18.96■□□□□ 0.63
TOM1-217ENST00000497448 PTPRGP23470 1445 aa18.95■□□□□ 0.62
TOM1-217ENST00000497448 MAP3K4Q9Y6R4 1608 aa18.95■□□□□ 0.62
TOM1-217ENST00000497448 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.61
TOM1-217ENST00000497448 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
TOM1-217ENST00000497448 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
TOM1-217ENST00000497448 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
TOM1-217ENST00000497448 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
TOM1-217ENST00000497448 IGF1RP08069 1367 aa18.86■□□□□ 0.61
TOM1-217ENST00000497448 CARMIL2Q6F5E8 1435 aa18.84■□□□□ 0.61
TOM1-217ENST00000497448 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
TOM1-217ENST00000497448 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
TOM1-217ENST00000497448 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
TOM1-217ENST00000497448 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
TOM1-217ENST00000497448 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
TOM1-217ENST00000497448 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
TOM1-217ENST00000497448 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
TOM1-217ENST00000497448 FBXO41Q8TF61 875 aa18.76■□□□□ 0.59
TOM1-217ENST00000497448 KIF21BO75037 1637 aa18.74■□□□□ 0.59
TOM1-217ENST00000497448 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
TOM1-217ENST00000497448 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
TOM1-217ENST00000497448 KIAA0556O60303 1618 aa18.71■□□□□ 0.58
TOM1-217ENST00000497448 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
TOM1-217ENST00000497448 UGGT2Q9NYU1 1516 aa18.68■□□□□ 0.58
TOM1-217ENST00000497448 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
TOM1-217ENST00000497448 CD109Q6YHK3 1445 aa18.61■□□□□ 0.57
TOM1-217ENST00000497448 ADAMTSL3P82987 1691 aa18.6■□□□□ 0.57
TOM1-217ENST00000497448 PTPRMP28827 1452 aa18.58■□□□□ 0.57
TOM1-217ENST00000497448 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
TOM1-217ENST00000497448 ABCA8O94911 1581 aa18.54■□□□□ 0.56
TOM1-217ENST00000497448 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
TOM1-217ENST00000497448 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.56
TOM1-217ENST00000497448 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
TOM1-217ENST00000497448 MADDQ8WXG6 1647 aa18.51■□□□□ 0.55
TOM1-217ENST00000497448 BCORL1Q5H9F3 1711 aa18.51■□□□□ 0.55
TOM1-217ENST00000497448 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
TOM1-217ENST00000497448 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
TOM1-217ENST00000497448 FRMPD1Q5SYB0 1578 aa18.44■□□□□ 0.54
TOM1-217ENST00000497448 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
TOM1-217ENST00000497448 RIMS1Q86UR5 1692 aaKnown RBP18.42■□□□□ 0.54
TOM1-217ENST00000497448 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
TOM1-217ENST00000497448 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
TOM1-217ENST00000497448 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
TOM1-217ENST00000497448 NEO1Q92859 1461 aa18.35■□□□□ 0.53
TOM1-217ENST00000497448 RAPGEF3O95398 923 aa18.34■□□□□ 0.53
TOM1-217ENST00000497448 ATP10BO94823 1461 aa18.32■□□□□ 0.52
TOM1-217ENST00000497448 ARID4BQ4LE39 1312 aaPredicted RBP18.3■□□□□ 0.52
TOM1-217ENST00000497448 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
TOM1-217ENST00000497448 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
TOM1-217ENST00000497448 HSPA2P54652 639 aa18.3■□□□□ 0.52
TOM1-217ENST00000497448 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
TOM1-217ENST00000497448 ILDR2Q71H61 639 aa18.28■□□□□ 0.52
TOM1-217ENST00000497448 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
TOM1-217ENST00000497448 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
TOM1-217ENST00000497448 SOCS7O14512 581 aa18.25■□□□□ 0.51
TOM1-217ENST00000497448 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
TOM1-217ENST00000497448 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
TOM1-217ENST00000497448 FANCAO15360 1455 aa18.22■□□□□ 0.51
TOM1-217ENST00000497448 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
TOM1-217ENST00000497448 SPATA31D1Q6ZQQ2 1576 aa18.21■□□□□ 0.51
TOM1-217ENST00000497448 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
TOM1-217ENST00000497448 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
TOM1-217ENST00000497448 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
TOM1-217ENST00000497448 SAMD9Q5K651 1589 aa18.19■□□□□ 0.5
TOM1-217ENST00000497448 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
TOM1-217ENST00000497448 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
TOM1-217ENST00000497448 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
TOM1-217ENST00000497448 POGZQ7Z3K3 1410 aa18.18■□□□□ 0.5
TOM1-217ENST00000497448 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
TOM1-217ENST00000497448 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
TOM1-217ENST00000497448 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
TOM1-217ENST00000497448 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
TOM1-217ENST00000497448 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
TOM1-217ENST00000497448 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
TOM1-217ENST00000497448 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
TOM1-217ENST00000497448 STRCQ7RTU9 1775 aa18.13■□□□□ 0.49
TOM1-217ENST00000497448 HECW1Q76N89 1606 aa18.1■□□□□ 0.49
TOM1-217ENST00000497448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
TOM1-217ENST00000497448 ARHGEF12Q9NZN5 1544 aa18.1■□□□□ 0.49
TOM1-217ENST00000497448 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
TOM1-217ENST00000497448 MAGI2Q86UL8 1455 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms