RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
RPN1-207ENST00000497289 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
RPN1-207ENST00000497289 APLP2Q06481 763 aa24.46■■□□□ 1.51
RPN1-207ENST00000497289 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
RPN1-207ENST00000497289 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
RPN1-207ENST00000497289 HRCP23327 699 aa24.38■■□□□ 1.49
RPN1-207ENST00000497289 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
RPN1-207ENST00000497289 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
RPN1-207ENST00000497289 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
RPN1-207ENST00000497289 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
RPN1-207ENST00000497289 IQGAP2Q13576 1575 aa24.28■■□□□ 1.48
RPN1-207ENST00000497289 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
RPN1-207ENST00000497289 MAP3K1Q13233 1512 aa24.26■■□□□ 1.47
RPN1-207ENST00000497289 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
RPN1-207ENST00000497289 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
RPN1-207ENST00000497289 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
RPN1-207ENST00000497289 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
RPN1-207ENST00000497289 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
RPN1-207ENST00000497289 FMN1Q68DA7 1419 aa24.2■■□□□ 1.46
RPN1-207ENST00000497289 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
RPN1-207ENST00000497289 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
RPN1-207ENST00000497289 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
RPN1-207ENST00000497289 KIAA0586Q9BVV6 1533 aa24.13■■□□□ 1.45
RPN1-207ENST00000497289 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
RPN1-207ENST00000497289 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
RPN1-207ENST00000497289 LRRC9Q6ZRR7 1453 aa24.09■■□□□ 1.45
RPN1-207ENST00000497289 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
RPN1-207ENST00000497289 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
RPN1-207ENST00000497289 KIAA0556O60303 1618 aa24.04■■□□□ 1.44
RPN1-207ENST00000497289 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
RPN1-207ENST00000497289 ATP1B4Q9UN42 357 aaPredicted RBP24.02■■□□□ 1.44
RPN1-207ENST00000497289 NUP160Q12769 1436 aa24.01■■□□□ 1.43
RPN1-207ENST00000497289 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
RPN1-207ENST00000497289 HECW1Q76N89 1606 aa24■■□□□ 1.43
RPN1-207ENST00000497289 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
RPN1-207ENST00000497289 FBLN2P98095 1184 aa23.96■■□□□ 1.43
RPN1-207ENST00000497289 CHD1O14646 1710 aa23.95■■□□□ 1.42
RPN1-207ENST00000497289 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
RPN1-207ENST00000497289 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
RPN1-207ENST00000497289 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
RPN1-207ENST00000497289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
RPN1-207ENST00000497289 EHBP1L1Q8N3D4 1523 aa23.87■■□□□ 1.41
RPN1-207ENST00000497289 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
RPN1-207ENST00000497289 SUPT6HQ7KZ85 1726 aaKnown RBP23.85■■□□□ 1.41
RPN1-207ENST00000497289 RAPGEF6Q8TEU7 1601 aa23.85■■□□□ 1.41
RPN1-207ENST00000497289 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
RPN1-207ENST00000497289 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
RPN1-207ENST00000497289 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
RPN1-207ENST00000497289 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.41
RPN1-207ENST00000497289 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
RPN1-207ENST00000497289 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
RPN1-207ENST00000497289 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
RPN1-207ENST00000497289 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
RPN1-207ENST00000497289 NUP153P49790 1475 aaKnown RBP23.73■■□□□ 1.39
RPN1-207ENST00000497289 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
RPN1-207ENST00000497289 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
RPN1-207ENST00000497289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
RPN1-207ENST00000497289 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
RPN1-207ENST00000497289 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
RPN1-207ENST00000497289 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
RPN1-207ENST00000497289 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
RPN1-207ENST00000497289 ABCA8O94911 1581 aa23.64■■□□□ 1.38
RPN1-207ENST00000497289 FAM50AQ14320 339 aaKnown RBP23.64■■□□□ 1.37
RPN1-207ENST00000497289 ITGAEP38570 1179 aa23.62■■□□□ 1.37
RPN1-207ENST00000497289 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
RPN1-207ENST00000497289 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
RPN1-207ENST00000497289 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
RPN1-207ENST00000497289 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
RPN1-207ENST00000497289 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
RPN1-207ENST00000497289 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
RPN1-207ENST00000497289 PTPRGP23470 1445 aa23.53■■□□□ 1.36
RPN1-207ENST00000497289 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
RPN1-207ENST00000497289 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
RPN1-207ENST00000497289 SETD5Q9C0A6 1442 aa23.51■■□□□ 1.35
RPN1-207ENST00000497289 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
RPN1-207ENST00000497289 ITSN2Q9NZM3 1697 aa23.49■■□□□ 1.35
RPN1-207ENST00000497289 RAB3GAP2Q9H2M9 1393 aa23.48■■□□□ 1.35
RPN1-207ENST00000497289 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
RPN1-207ENST00000497289 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
RPN1-207ENST00000497289 ATP10BO94823 1461 aa23.45■■□□□ 1.34
RPN1-207ENST00000497289 KIF14Q15058 1648 aa23.44■■□□□ 1.34
RPN1-207ENST00000497289 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
RPN1-207ENST00000497289 PTPRKQ15262 1439 aa23.39■■□□□ 1.33
RPN1-207ENST00000497289 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
RPN1-207ENST00000497289 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
RPN1-207ENST00000497289 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
RPN1-207ENST00000497289 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
RPN1-207ENST00000497289 DNMT1P26358 1616 aaKnown RBP23.35■■□□□ 1.33
RPN1-207ENST00000497289 CDC42BPAQ5VT25 1732 aa23.35■■□□□ 1.33
RPN1-207ENST00000497289 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
RPN1-207ENST00000497289 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
RPN1-207ENST00000497289 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
RPN1-207ENST00000497289 NAIPQ13075 1403 aa23.29■■□□□ 1.32
RPN1-207ENST00000497289 UHRF1BP1LA0JNW5 1464 aa23.29■■□□□ 1.32
RPN1-207ENST00000497289 CAMSAP2Q08AD1 1489 aa23.29■■□□□ 1.32
RPN1-207ENST00000497289 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
RPN1-207ENST00000497289 DAPK1P53355 1430 aa23.27■■□□□ 1.32
RPN1-207ENST00000497289 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
RPN1-207ENST00000497289 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
RPN1-207ENST00000497289 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms