RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
PHGDH-207ENST00000496756 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
PHGDH-207ENST00000496756 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PHGDH-207ENST00000496756 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
PHGDH-207ENST00000496756 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
PHGDH-207ENST00000496756 DIP2BQ9P265 1576 aa22.92■■□□□ 1.26
PHGDH-207ENST00000496756 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
PHGDH-207ENST00000496756 KDM6BO15054 1643 aa22.86■■□□□ 1.25
PHGDH-207ENST00000496756 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
PHGDH-207ENST00000496756 KIAA0586Q9BVV6 1533 aa22.82■■□□□ 1.24
PHGDH-207ENST00000496756 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
PHGDH-207ENST00000496756 IGF1RP08069 1367 aa22.71■■□□□ 1.23
PHGDH-207ENST00000496756 PTPRGP23470 1445 aa22.7■■□□□ 1.22
PHGDH-207ENST00000496756 CUL7Q14999 1698 aa22.7■■□□□ 1.22
PHGDH-207ENST00000496756 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
PHGDH-207ENST00000496756 ABCC2Q92887 1545 aa22.64■■□□□ 1.21
PHGDH-207ENST00000496756 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-207ENST00000496756 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.21
PHGDH-207ENST00000496756 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
PHGDH-207ENST00000496756 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
PHGDH-207ENST00000496756 GLI2P10070 1586 aa22.6■■□□□ 1.21
PHGDH-207ENST00000496756 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-207ENST00000496756 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
PHGDH-207ENST00000496756 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
PHGDH-207ENST00000496756 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
PHGDH-207ENST00000496756 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
PHGDH-207ENST00000496756 PPRC1Q5VV67 1664 aaKnown RBP22.54■■□□□ 1.2
PHGDH-207ENST00000496756 IQGAP2Q13576 1575 aa22.51■■□□□ 1.19
PHGDH-207ENST00000496756 UACAQ9BZF9 1416 aa22.5■■□□□ 1.19
PHGDH-207ENST00000496756 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
PHGDH-207ENST00000496756 EPRSP07814 1512 aaKnown RBP22.45■■□□□ 1.18
PHGDH-207ENST00000496756 KDM5BQ9UGL1 1544 aa22.44■■□□□ 1.18
PHGDH-207ENST00000496756 COL17A1Q9UMD9 1497 aaPredicted RBP22.44■■□□□ 1.18
PHGDH-207ENST00000496756 MAP3K4Q9Y6R4 1608 aa22.44■■□□□ 1.18
PHGDH-207ENST00000496756 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
PHGDH-207ENST00000496756 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
PHGDH-207ENST00000496756 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
PHGDH-207ENST00000496756 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
PHGDH-207ENST00000496756 WDR7Q9Y4E6 1490 aa22.31■■□□□ 1.16
PHGDH-207ENST00000496756 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
PHGDH-207ENST00000496756 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
PHGDH-207ENST00000496756 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
PHGDH-207ENST00000496756 MAGI3Q5TCQ9 1506 aa22.23■■□□□ 1.15
PHGDH-207ENST00000496756 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
PHGDH-207ENST00000496756 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
PHGDH-207ENST00000496756 KCNH8Q96L42 1107 aa22.17■■□□□ 1.14
PHGDH-207ENST00000496756 ABCA8O94911 1581 aa22.12■■□□□ 1.13
PHGDH-207ENST00000496756 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
PHGDH-207ENST00000496756 FBXO41Q8TF61 875 aa22.1■■□□□ 1.13
PHGDH-207ENST00000496756 KIF21BO75037 1637 aa22.09■■□□□ 1.13
PHGDH-207ENST00000496756 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
PHGDH-207ENST00000496756 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-207ENST00000496756 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
PHGDH-207ENST00000496756 PTPRMP28827 1452 aa21.99■■□□□ 1.11
PHGDH-207ENST00000496756 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
PHGDH-207ENST00000496756 ADAMTSL3P82987 1691 aa21.97■■□□□ 1.11
PHGDH-207ENST00000496756 ATP10BO94823 1461 aa21.95■■□□□ 1.1
PHGDH-207ENST00000496756 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
PHGDH-207ENST00000496756 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
PHGDH-207ENST00000496756 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
PHGDH-207ENST00000496756 NEO1Q92859 1461 aa21.91■■□□□ 1.1
PHGDH-207ENST00000496756 RAPGEF3O95398 923 aa21.91■■□□□ 1.1
PHGDH-207ENST00000496756 ARID4BQ4LE39 1312 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-207ENST00000496756 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
PHGDH-207ENST00000496756 BCORL1Q5H9F3 1711 aa21.87■■□□□ 1.09
PHGDH-207ENST00000496756 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
PHGDH-207ENST00000496756 MADDQ8WXG6 1647 aa21.83■■□□□ 1.08
PHGDH-207ENST00000496756 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.08
PHGDH-207ENST00000496756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-207ENST00000496756 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
PHGDH-207ENST00000496756 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
PHGDH-207ENST00000496756 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
PHGDH-207ENST00000496756 SAMD9Q5K651 1589 aa21.77■■□□□ 1.08
PHGDH-207ENST00000496756 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
PHGDH-207ENST00000496756 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-207ENST00000496756 POGZQ7Z3K3 1410 aa21.73■■□□□ 1.07
PHGDH-207ENST00000496756 RIMS1Q86UR5 1692 aaKnown RBP21.73■■□□□ 1.07
PHGDH-207ENST00000496756 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
PHGDH-207ENST00000496756 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
PHGDH-207ENST00000496756 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
PHGDH-207ENST00000496756 RICTORQ6R327 1708 aa21.7■■□□□ 1.06
PHGDH-207ENST00000496756 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
PHGDH-207ENST00000496756 FANCAO15360 1455 aa21.7■■□□□ 1.06
PHGDH-207ENST00000496756 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
PHGDH-207ENST00000496756 HSPA2P54652 639 aa21.68■■□□□ 1.06
PHGDH-207ENST00000496756 CSRNP3Q8WYN3 585 aa21.66■■□□□ 1.06
PHGDH-207ENST00000496756 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
PHGDH-207ENST00000496756 CERKQ8TCT0 537 aa21.64■■□□□ 1.05
PHGDH-207ENST00000496756 EFCAB5A4FU69 1503 aa21.64■■□□□ 1.05
PHGDH-207ENST00000496756 MAGI2Q86UL8 1455 aa21.64■■□□□ 1.05
PHGDH-207ENST00000496756 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
PHGDH-207ENST00000496756 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
PHGDH-207ENST00000496756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.056e-6■■■■■ 38.2
PHGDH-207ENST00000496756 YEATS2Q9ULM3 1422 aa21.58■■□□□ 1.05
PHGDH-207ENST00000496756 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
PHGDH-207ENST00000496756 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
PHGDH-207ENST00000496756 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
PHGDH-207ENST00000496756 MLECQ14165 292 aa21.55■■□□□ 1.04
PHGDH-207ENST00000496756 SIGLEC1Q9BZZ2 1709 aa21.54■■□□□ 1.04
PHGDH-207ENST00000496756 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms