RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
COL15A1-204ENST00000496686 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
COL15A1-204ENST00000496686 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
COL15A1-204ENST00000496686 APLP2Q06481 763 aa23.59■■□□□ 1.37
COL15A1-204ENST00000496686 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
COL15A1-204ENST00000496686 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
COL15A1-204ENST00000496686 SAMD9Q5K651 1589 aa23.54■■□□□ 1.36
COL15A1-204ENST00000496686 MAP3K1Q13233 1512 aa23.53■■□□□ 1.36
COL15A1-204ENST00000496686 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
COL15A1-204ENST00000496686 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
COL15A1-204ENST00000496686 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
COL15A1-204ENST00000496686 FHOD3Q2V2M9 1422 aa23.45■■□□□ 1.34
COL15A1-204ENST00000496686 FMN1Q68DA7 1419 aa23.45■■□□□ 1.34
COL15A1-204ENST00000496686 KIAA0586Q9BVV6 1533 aa23.44■■□□□ 1.34
COL15A1-204ENST00000496686 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
COL15A1-204ENST00000496686 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
COL15A1-204ENST00000496686 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
COL15A1-204ENST00000496686 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
COL15A1-204ENST00000496686 TIAM1Q13009 1591 aa23.39■■□□□ 1.33
COL15A1-204ENST00000496686 NUP160Q12769 1436 aa23.35■■□□□ 1.33
COL15A1-204ENST00000496686 HRCP23327 699 aa23.35■■□□□ 1.33
COL15A1-204ENST00000496686 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
COL15A1-204ENST00000496686 CFAP43Q8NDM7 1665 aa23.35■■□□□ 1.33
COL15A1-204ENST00000496686 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
COL15A1-204ENST00000496686 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.32
COL15A1-204ENST00000496686 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
COL15A1-204ENST00000496686 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
COL15A1-204ENST00000496686 LRRC9Q6ZRR7 1453 aa23.27■■□□□ 1.32
COL15A1-204ENST00000496686 KIAA0556O60303 1618 aa23.25■■□□□ 1.31
COL15A1-204ENST00000496686 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
COL15A1-204ENST00000496686 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
COL15A1-204ENST00000496686 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
COL15A1-204ENST00000496686 FBLN2P98095 1184 aa23.18■■□□□ 1.3
COL15A1-204ENST00000496686 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
COL15A1-204ENST00000496686 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
COL15A1-204ENST00000496686 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
COL15A1-204ENST00000496686 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
COL15A1-204ENST00000496686 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
COL15A1-204ENST00000496686 CHD1O14646 1710 aa23.1■■□□□ 1.29
COL15A1-204ENST00000496686 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
COL15A1-204ENST00000496686 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
COL15A1-204ENST00000496686 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.28
COL15A1-204ENST00000496686 EPRSP07814 1512 aaKnown RBP23.05■■□□□ 1.28
COL15A1-204ENST00000496686 MTUS2Q5JR59 1369 aa23.04■■□□□ 1.28
COL15A1-204ENST00000496686 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
COL15A1-204ENST00000496686 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
COL15A1-204ENST00000496686 SHROOM2Q13796 1616 aa23■■□□□ 1.27
COL15A1-204ENST00000496686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
COL15A1-204ENST00000496686 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
COL15A1-204ENST00000496686 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
COL15A1-204ENST00000496686 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
COL15A1-204ENST00000496686 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
COL15A1-204ENST00000496686 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
COL15A1-204ENST00000496686 NCOA2Q15596 1464 aa22.94■■□□□ 1.26
COL15A1-204ENST00000496686 MAGI3Q5TCQ9 1506 aa22.93■■□□□ 1.26
COL15A1-204ENST00000496686 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
COL15A1-204ENST00000496686 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
COL15A1-204ENST00000496686 ABCA8O94911 1581 aa22.92■■□□□ 1.26
COL15A1-204ENST00000496686 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
COL15A1-204ENST00000496686 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
COL15A1-204ENST00000496686 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
COL15A1-204ENST00000496686 PLB1Q6P1J6 1458 aa22.88■■□□□ 1.25
COL15A1-204ENST00000496686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
COL15A1-204ENST00000496686 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
COL15A1-204ENST00000496686 PTPRGP23470 1445 aa22.84■■□□□ 1.25
COL15A1-204ENST00000496686 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
COL15A1-204ENST00000496686 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
COL15A1-204ENST00000496686 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
COL15A1-204ENST00000496686 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
COL15A1-204ENST00000496686 ADCY10Q96PN6 1610 aa22.76■■□□□ 1.23
COL15A1-204ENST00000496686 PTPN23Q9H3S7 1636 aa22.75■■□□□ 1.23
COL15A1-204ENST00000496686 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
COL15A1-204ENST00000496686 ATP10BO94823 1461 aa22.73■■□□□ 1.23
COL15A1-204ENST00000496686 ARID3CA6NKF2 412 aa22.7■■□□□ 1.22
COL15A1-204ENST00000496686 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
COL15A1-204ENST00000496686 ERCC6L2Q5T890 1561 aa22.69■■□□□ 1.22
COL15A1-204ENST00000496686 SETD5Q9C0A6 1442 aa22.69■■□□□ 1.22
COL15A1-204ENST00000496686 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
COL15A1-204ENST00000496686 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
COL15A1-204ENST00000496686 ITGAEP38570 1179 aa22.67■■□□□ 1.22
COL15A1-204ENST00000496686 PLEKHD1A6NEE1 506 aa22.65■■□□□ 1.22
COL15A1-204ENST00000496686 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
COL15A1-204ENST00000496686 KIF14Q15058 1648 aa22.64■■□□□ 1.21
COL15A1-204ENST00000496686 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
COL15A1-204ENST00000496686 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
COL15A1-204ENST00000496686 AKNAQ7Z591 1439 aa22.6■■□□□ 1.21
COL15A1-204ENST00000496686 HFM1A2PYH4 1435 aa22.59■■□□□ 1.21
COL15A1-204ENST00000496686 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
COL15A1-204ENST00000496686 PTPRKQ15262 1439 aa22.58■■□□□ 1.21
COL15A1-204ENST00000496686 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.21
COL15A1-204ENST00000496686 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
COL15A1-204ENST00000496686 KDM5BQ9UGL1 1544 aa22.54■■□□□ 1.2
COL15A1-204ENST00000496686 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
COL15A1-204ENST00000496686 NAIPQ13075 1403 aa22.5■■□□□ 1.19
COL15A1-204ENST00000496686 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
COL15A1-204ENST00000496686 DAPK1P53355 1430 aa22.49■■□□□ 1.19
COL15A1-204ENST00000496686 CAMSAP2Q08AD1 1489 aa22.49■■□□□ 1.19
COL15A1-204ENST00000496686 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
COL15A1-204ENST00000496686 ZCCHC11Q5TAX3 1644 aaKnown RBP22.47■■□□□ 1.19
COL15A1-204ENST00000496686 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms