RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
ATG3-209ENST00000496423 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
ATG3-209ENST00000496423 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
ATG3-209ENST00000496423 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
ATG3-209ENST00000496423 DIP2BQ9P265 1576 aa21.59■■□□□ 1.05
ATG3-209ENST00000496423 TSPOAP1O95153 1857 aa21.56■■□□□ 1.04
ATG3-209ENST00000496423 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
ATG3-209ENST00000496423 ADGRL1O94910 1474 aa21.45■■□□□ 1.03
ATG3-209ENST00000496423 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
ATG3-209ENST00000496423 HECW2Q9P2P5 1572 aa21.43■■□□□ 1.02
ATG3-209ENST00000496423 FBXO41Q8TF61 875 aa21.42■■□□□ 1.02
ATG3-209ENST00000496423 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
ATG3-209ENST00000496423 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
ATG3-209ENST00000496423 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
ATG3-209ENST00000496423 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
ATG3-209ENST00000496423 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
ATG3-209ENST00000496423 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
ATG3-209ENST00000496423 GLI2P10070 1586 aa21.23■□□□□ 0.99
ATG3-209ENST00000496423 PTPRGP23470 1445 aa21.21■□□□□ 0.99
ATG3-209ENST00000496423 KIAA0586Q9BVV6 1533 aa21.2■□□□□ 0.98
ATG3-209ENST00000496423 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
ATG3-209ENST00000496423 ASXL2Q76L83 1435 aa21.18■□□□□ 0.98
ATG3-209ENST00000496423 TEX14Q8IWB6 1497 aa21.18■□□□□ 0.98
ATG3-209ENST00000496423 ABCC2Q92887 1545 aa21.16■□□□□ 0.98
ATG3-209ENST00000496423 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
ATG3-209ENST00000496423 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
ATG3-209ENST00000496423 COL17A1Q9UMD9 1497 aaPredicted RBP21.1■□□□□ 0.97
ATG3-209ENST00000496423 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
ATG3-209ENST00000496423 LMTK3Q96Q04 1460 aa21.07■□□□□ 0.96
ATG3-209ENST00000496423 CUL7Q14999 1698 aa21.06■□□□□ 0.96
ATG3-209ENST00000496423 MAP3K4Q9Y6R4 1608 aa21.05■□□□□ 0.96
ATG3-209ENST00000496423 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
ATG3-209ENST00000496423 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
ATG3-209ENST00000496423 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
ATG3-209ENST00000496423 IGF1RP08069 1367 aa20.93■□□□□ 0.94
ATG3-209ENST00000496423 KDM5BQ9UGL1 1544 aa20.93■□□□□ 0.94
ATG3-209ENST00000496423 SOCS7O14512 581 aa20.9■□□□□ 0.94
ATG3-209ENST00000496423 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
ATG3-209ENST00000496423 ZCCHC11Q5TAX3 1644 aaKnown RBP20.87■□□□□ 0.93
ATG3-209ENST00000496423 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
ATG3-209ENST00000496423 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
ATG3-209ENST00000496423 KIF21BO75037 1637 aa20.85■□□□□ 0.93
ATG3-209ENST00000496423 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.93
ATG3-209ENST00000496423 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
ATG3-209ENST00000496423 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
ATG3-209ENST00000496423 PTPRMP28827 1452 aa20.82■□□□□ 0.92
ATG3-209ENST00000496423 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
ATG3-209ENST00000496423 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
ATG3-209ENST00000496423 DISP3Q9P2K9 1392 aa20.82■□□□□ 0.92
ATG3-209ENST00000496423 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
ATG3-209ENST00000496423 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
ATG3-209ENST00000496423 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
ATG3-209ENST00000496423 DISP1Q96F81 1524 aa20.75■□□□□ 0.91
ATG3-209ENST00000496423 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
ATG3-209ENST00000496423 ILDR2Q71H61 639 aa20.74■□□□□ 0.91
ATG3-209ENST00000496423 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
ATG3-209ENST00000496423 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
ATG3-209ENST00000496423 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
ATG3-209ENST00000496423 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
ATG3-209ENST00000496423 UGGT2Q9NYU1 1516 aa20.67■□□□□ 0.9
ATG3-209ENST00000496423 KIAA0556O60303 1618 aa20.64■□□□□ 0.89
ATG3-209ENST00000496423 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
ATG3-209ENST00000496423 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
ATG3-209ENST00000496423 HSPA2P54652 639 aa20.59■□□□□ 0.89
ATG3-209ENST00000496423 RAPGEF3O95398 923 aa20.55■□□□□ 0.88
ATG3-209ENST00000496423 GOLGA3Q08378 1498 aa20.54■□□□□ 0.88
ATG3-209ENST00000496423 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
ATG3-209ENST00000496423 RIMS1Q86UR5 1692 aaKnown RBP20.53■□□□□ 0.88
ATG3-209ENST00000496423 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
ATG3-209ENST00000496423 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
ATG3-209ENST00000496423 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
ATG3-209ENST00000496423 POGZQ7Z3K3 1410 aa20.5■□□□□ 0.87
ATG3-209ENST00000496423 ABCA8O94911 1581 aa20.49■□□□□ 0.87
ATG3-209ENST00000496423 NEO1Q92859 1461 aa20.49■□□□□ 0.87
ATG3-209ENST00000496423 ABCA9Q8IUA7 1624 aa20.44■□□□□ 0.86
ATG3-209ENST00000496423 FANCAO15360 1455 aa20.41■□□□□ 0.86
ATG3-209ENST00000496423 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
ATG3-209ENST00000496423 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
ATG3-209ENST00000496423 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
ATG3-209ENST00000496423 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
ATG3-209ENST00000496423 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
ATG3-209ENST00000496423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.35■□□□□ 0.85
ATG3-209ENST00000496423 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
ATG3-209ENST00000496423 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
ATG3-209ENST00000496423 ATP10BO94823 1461 aa20.35■□□□□ 0.85
ATG3-209ENST00000496423 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
ATG3-209ENST00000496423 MLECQ14165 292 aa20.31■□□□□ 0.84
ATG3-209ENST00000496423 PREX1Q8TCU6 1659 aa20.31■□□□□ 0.84
ATG3-209ENST00000496423 FER1L4A9Z1Z3 1794 aa20.3■□□□□ 0.84
ATG3-209ENST00000496423 RICTORQ6R327 1708 aa20.27■□□□□ 0.83
ATG3-209ENST00000496423 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.83
ATG3-209ENST00000496423 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.83
ATG3-209ENST00000496423 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
ATG3-209ENST00000496423 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
ATG3-209ENST00000496423 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
ATG3-209ENST00000496423 ZFYVE16Q7Z3T8 1539 aa20.24■□□□□ 0.83
ATG3-209ENST00000496423 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
ATG3-209ENST00000496423 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
ATG3-209ENST00000496423 IQSEC2Q5JU85 1478 aa20.22■□□□□ 0.83
ATG3-209ENST00000496423 PTPRTO14522 1441 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms