RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
BRD9-213ENST00000495794 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
BRD9-213ENST00000495794 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.64e-8■■■■■ 75.7
BRD9-213ENST00000495794 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
BRD9-213ENST00000495794 STAG3Q9UJ98 1225 aa18.82■□□□□ 0.6
BRD9-213ENST00000495794 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
BRD9-213ENST00000495794 PLEKHD1A6NEE1 506 aa18.73■□□□□ 0.59
BRD9-213ENST00000495794 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
BRD9-213ENST00000495794 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
BRD9-213ENST00000495794 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
BRD9-213ENST00000495794 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
BRD9-213ENST00000495794 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
BRD9-213ENST00000495794 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
BRD9-213ENST00000495794 SOGA1O94964 1423 aa18.65■□□□□ 0.58
BRD9-213ENST00000495794 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
BRD9-213ENST00000495794 WIZO95785 1651 aa18.63■□□□□ 0.57
BRD9-213ENST00000495794 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
BRD9-213ENST00000495794 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
BRD9-213ENST00000495794 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
BRD9-213ENST00000495794 HSP90AA1P07900 732 aaKnown RBP18.58■□□□□ 0.57
BRD9-213ENST00000495794 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
BRD9-213ENST00000495794 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
BRD9-213ENST00000495794 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
BRD9-213ENST00000495794 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
BRD9-213ENST00000495794 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
BRD9-213ENST00000495794 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
BRD9-213ENST00000495794 CUX2O14529 1486 aa18.5■□□□□ 0.55
BRD9-213ENST00000495794 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
BRD9-213ENST00000495794 SUPT16HQ9Y5B9 1047 aaKnown RBP18.46■□□□□ 0.55
BRD9-213ENST00000495794 NBR1Q14596 966 aa18.46■□□□□ 0.55
BRD9-213ENST00000495794 SENP3-EIF4A1A0A087X0R7 540 aa18.45■□□□□ 0.54
BRD9-213ENST00000495794 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
BRD9-213ENST00000495794 CDCA8Q53HL2 280 aa18.44■□□□□ 0.54
BRD9-213ENST00000495794 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
BRD9-213ENST00000495794 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
BRD9-213ENST00000495794 KNSTRNQ9Y448 316 aa18.43■□□□□ 0.54
BRD9-213ENST00000495794 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
BRD9-213ENST00000495794 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
BRD9-213ENST00000495794 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
BRD9-213ENST00000495794 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
BRD9-213ENST00000495794 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
BRD9-213ENST00000495794 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
BRD9-213ENST00000495794 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
BRD9-213ENST00000495794 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
BRD9-213ENST00000495794 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
BRD9-213ENST00000495794 DCAF11Q8TEB1 546 aa18.29■□□□□ 0.52
BRD9-213ENST00000495794 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
BRD9-213ENST00000495794 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
BRD9-213ENST00000495794 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.51
BRD9-213ENST00000495794 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
BRD9-213ENST00000495794 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
BRD9-213ENST00000495794 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
BRD9-213ENST00000495794 DDRGK1Q96HY6 314 aa18.24■□□□□ 0.51
BRD9-213ENST00000495794 ARXQ96QS3 562 aa18.24■□□□□ 0.51
BRD9-213ENST00000495794 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
BRD9-213ENST00000495794 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
BRD9-213ENST00000495794 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
BRD9-213ENST00000495794 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
BRD9-213ENST00000495794 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
BRD9-213ENST00000495794 BECN1Q14457 450 aa18.22■□□□□ 0.51
BRD9-213ENST00000495794 ANP32EQ9BTT0 268 aa18.22■□□□□ 0.51
BRD9-213ENST00000495794 C14orf37Q86TY3 774 aa18.21■□□□□ 0.51
BRD9-213ENST00000495794 TMF1P82094 1093 aa18.21■□□□□ 0.5
BRD9-213ENST00000495794 PKD2Q13563 968 aa18.19■□□□□ 0.5
BRD9-213ENST00000495794 FMN1Q68DA7 1419 aa18.19■□□□□ 0.5
BRD9-213ENST00000495794 NUDCQ9Y266 331 aa18.19■□□□□ 0.5
BRD9-213ENST00000495794 FOXD1Q16676 465 aa18.18■□□□□ 0.5
BRD9-213ENST00000495794 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
BRD9-213ENST00000495794 POGKQ9P215 609 aa18.18■□□□□ 0.5
BRD9-213ENST00000495794 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
BRD9-213ENST00000495794 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
BRD9-213ENST00000495794 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
BRD9-213ENST00000495794 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
BRD9-213ENST00000495794 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
BRD9-213ENST00000495794 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
BRD9-213ENST00000495794 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
BRD9-213ENST00000495794 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
BRD9-213ENST00000495794 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
BRD9-213ENST00000495794 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
BRD9-213ENST00000495794 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
BRD9-213ENST00000495794 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
BRD9-213ENST00000495794 RGS3P49796 1198 aa18.12■□□□□ 0.49
BRD9-213ENST00000495794 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
BRD9-213ENST00000495794 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
BRD9-213ENST00000495794 KANK1Q14678 1352 aa18.1■□□□□ 0.49
BRD9-213ENST00000495794 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
BRD9-213ENST00000495794 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.49
BRD9-213ENST00000495794 NUP155O75694 1391 aa18.06■□□□□ 0.48
BRD9-213ENST00000495794 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
BRD9-213ENST00000495794 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
BRD9-213ENST00000495794 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
BRD9-213ENST00000495794 A0A0G2JS52 829 aa18.03■□□□□ 0.48
BRD9-213ENST00000495794 ANKRD30AQ9BXX3 1397 aa18.03■□□□□ 0.48
BRD9-213ENST00000495794 MS4A1P11836 297 aa18.02■□□□□ 0.48
BRD9-213ENST00000495794 GGT6Q6P531 493 aa18.01■□□□□ 0.47
BRD9-213ENST00000495794 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
BRD9-213ENST00000495794 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
BRD9-213ENST00000495794 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
BRD9-213ENST00000495794 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
BRD9-213ENST00000495794 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms