RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
COL1A1-209ENST00000495677 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
COL1A1-209ENST00000495677 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
COL1A1-209ENST00000495677 FAM69CQ0P6D2 419 aa24.22■■□□□ 1.47
COL1A1-209ENST00000495677 NPM1P06748 294 aaKnown RBP eCLIP24.21■■□□□ 1.47
COL1A1-209ENST00000495677 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
COL1A1-209ENST00000495677 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
COL1A1-209ENST00000495677 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
COL1A1-209ENST00000495677 KDM6BO15054 1643 aa24.09■■□□□ 1.45
COL1A1-209ENST00000495677 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
COL1A1-209ENST00000495677 KDM4FA0A1W2PPD8 638 aa24.04■■□□□ 1.44
COL1A1-209ENST00000495677 CUL7Q14999 1698 aa24.02■■□□□ 1.44
COL1A1-209ENST00000495677 IGF1RP08069 1367 aa24■■□□□ 1.43
COL1A1-209ENST00000495677 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
COL1A1-209ENST00000495677 PTPRGP23470 1445 aa23.92■■□□□ 1.42
COL1A1-209ENST00000495677 GLI2P10070 1586 aa23.89■■□□□ 1.41
COL1A1-209ENST00000495677 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
COL1A1-209ENST00000495677 ABCC2Q92887 1545 aa23.87■■□□□ 1.41
COL1A1-209ENST00000495677 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
COL1A1-209ENST00000495677 PLB1Q6P1J6 1458 aa23.85■■□□□ 1.41
COL1A1-209ENST00000495677 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
COL1A1-209ENST00000495677 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
COL1A1-209ENST00000495677 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
COL1A1-209ENST00000495677 ASXL2Q76L83 1435 aa23.81■■□□□ 1.4
COL1A1-209ENST00000495677 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
COL1A1-209ENST00000495677 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
COL1A1-209ENST00000495677 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
COL1A1-209ENST00000495677 MAP3K4Q9Y6R4 1608 aa23.73■■□□□ 1.39
COL1A1-209ENST00000495677 KDM5BQ9UGL1 1544 aa23.71■■□□□ 1.39
COL1A1-209ENST00000495677 ADGRL1O94910 1474 aa23.71■■□□□ 1.39
COL1A1-209ENST00000495677 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
COL1A1-209ENST00000495677 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
COL1A1-209ENST00000495677 EPRSP07814 1512 aaKnown RBP23.69■■□□□ 1.38
COL1A1-209ENST00000495677 COL17A1Q9UMD9 1497 aaPredicted RBP23.68■■□□□ 1.38
COL1A1-209ENST00000495677 TEX14Q8IWB6 1497 aa23.66■■□□□ 1.38
COL1A1-209ENST00000495677 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
COL1A1-209ENST00000495677 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
COL1A1-209ENST00000495677 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
COL1A1-209ENST00000495677 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
COL1A1-209ENST00000495677 HECW2Q9P2P5 1572 aa23.55■■□□□ 1.36
COL1A1-209ENST00000495677 WDR7Q9Y4E6 1490 aa23.51■■□□□ 1.35
COL1A1-209ENST00000495677 CFAP43Q8NDM7 1665 aa23.51■■□□□ 1.35
COL1A1-209ENST00000495677 MAGI3Q5TCQ9 1506 aa23.48■■□□□ 1.35
COL1A1-209ENST00000495677 CTTNBP2Q8WZ74 1663 aa23.45■■□□□ 1.34
COL1A1-209ENST00000495677 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
COL1A1-209ENST00000495677 ABCA8O94911 1581 aa23.4■■□□□ 1.34
COL1A1-209ENST00000495677 GOLGA3Q08378 1498 aa23.39■■□□□ 1.34
COL1A1-209ENST00000495677 KCNH8Q96L42 1107 aa23.32■■□□□ 1.32
COL1A1-209ENST00000495677 ARAP3Q8WWN8 1544 aa23.32■■□□□ 1.32
COL1A1-209ENST00000495677 KIF21BO75037 1637 aa23.31■■□□□ 1.32
COL1A1-209ENST00000495677 PHLDB1Q86UU1 1377 aa23.26■■□□□ 1.31
COL1A1-209ENST00000495677 ADAMTSL3P82987 1691 aa23.23■■□□□ 1.31
COL1A1-209ENST00000495677 FBXO41Q8TF61 875 aa23.21■■□□□ 1.31
COL1A1-209ENST00000495677 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
COL1A1-209ENST00000495677 ABCA9Q8IUA7 1624 aa23.21■■□□□ 1.31
COL1A1-209ENST00000495677 ATP10BO94823 1461 aa23.19■■□□□ 1.3
COL1A1-209ENST00000495677 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
COL1A1-209ENST00000495677 PTPRMP28827 1452 aa23.16■■□□□ 1.3
COL1A1-209ENST00000495677 NEO1Q92859 1461 aa23.12■■□□□ 1.29
COL1A1-209ENST00000495677 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
COL1A1-209ENST00000495677 RAPGEF3O95398 923 aa23.07■■□□□ 1.28
COL1A1-209ENST00000495677 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
COL1A1-209ENST00000495677 RAPGEF6Q8TEU7 1601 aa23.05■■□□□ 1.28
COL1A1-209ENST00000495677 FRMPD1Q5SYB0 1578 aa23.04■■□□□ 1.28
COL1A1-209ENST00000495677 PCF11O94913 1555 aaKnown RBP23.02■■□□□ 1.28
COL1A1-209ENST00000495677 MADDQ8WXG6 1647 aa23.02■■□□□ 1.28
COL1A1-209ENST00000495677 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
COL1A1-209ENST00000495677 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
COL1A1-209ENST00000495677 RICTORQ6R327 1708 aa22.99■■□□□ 1.27
COL1A1-209ENST00000495677 LMTK3Q96Q04 1460 aa22.98■■□□□ 1.27
COL1A1-209ENST00000495677 ARID4BQ4LE39 1312 aaPredicted RBP22.94■■□□□ 1.26
COL1A1-209ENST00000495677 RIMS1Q86UR5 1692 aaKnown RBP22.93■■□□□ 1.26
COL1A1-209ENST00000495677 ARHGEF40Q8TER5 1519 aa22.93■■□□□ 1.26
COL1A1-209ENST00000495677 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
COL1A1-209ENST00000495677 DENND4BO75064 1496 aaPredicted RBP22.92■■□□□ 1.26
COL1A1-209ENST00000495677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
COL1A1-209ENST00000495677 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
COL1A1-209ENST00000495677 CFAP74Q9C0B2 1584 aa22.91■■□□□ 1.26
COL1A1-209ENST00000495677 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
COL1A1-209ENST00000495677 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
COL1A1-209ENST00000495677 AKNAQ7Z591 1439 aa22.89■■□□□ 1.25
COL1A1-209ENST00000495677 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
COL1A1-209ENST00000495677 ZMYM4Q5VZL5 1548 aa22.87■■□□□ 1.25
COL1A1-209ENST00000495677 POGZQ7Z3K3 1410 aa22.85■■□□□ 1.25
COL1A1-209ENST00000495677 FANCAO15360 1455 aa22.85■■□□□ 1.25
COL1A1-209ENST00000495677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.84■■□□□ 1.25
COL1A1-209ENST00000495677 MAGI2Q86UL8 1455 aa22.84■■□□□ 1.25
COL1A1-209ENST00000495677 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
COL1A1-209ENST00000495677 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
COL1A1-209ENST00000495677 FER1L4A9Z1Z3 1794 aa22.78■■□□□ 1.24
COL1A1-209ENST00000495677 ZFYVE16Q7Z3T8 1539 aa22.78■■□□□ 1.24
COL1A1-209ENST00000495677 HSPA2P54652 639 aa22.77■■□□□ 1.24
COL1A1-209ENST00000495677 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
COL1A1-209ENST00000495677 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
COL1A1-209ENST00000495677 EEA1Q15075 1411 aa22.75■■□□□ 1.23
COL1A1-209ENST00000495677 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
COL1A1-209ENST00000495677 YEATS2Q9ULM3 1422 aa22.74■■□□□ 1.23
COL1A1-209ENST00000495677 CERKQ8TCT0 537 aa22.74■■□□□ 1.23
COL1A1-209ENST00000495677 PLCH2O75038 1416 aa22.7■■□□□ 1.22
COL1A1-209ENST00000495677 PREX1Q8TCU6 1659 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms