RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
RAB11FIP3-211ENST00000495663 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
RAB11FIP3-211ENST00000495663 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
RAB11FIP3-211ENST00000495663 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
RAB11FIP3-211ENST00000495663 SMARCA4P51532 1647 aa18.58■□□□□ 0.56
RAB11FIP3-211ENST00000495663 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
RAB11FIP3-211ENST00000495663 MIER1Q8N108 512 aa18.56■□□□□ 0.56
RAB11FIP3-211ENST00000495663 PHF12Q96QT6 1004 aa18.53■□□□□ 0.56
RAB11FIP3-211ENST00000495663 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
RAB11FIP3-211ENST00000495663 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
RAB11FIP3-211ENST00000495663 POTEIP0CG38 1075 aa18.47■□□□□ 0.55
RAB11FIP3-211ENST00000495663 CLCN6P51797 869 aa18.46■□□□□ 0.55
RAB11FIP3-211ENST00000495663 GALR2O43603 387 aaPredicted RBP18.45■□□□□ 0.54
RAB11FIP3-211ENST00000495663 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
RAB11FIP3-211ENST00000495663 TSPYL2Q9H2G4 693 aaPredicted RBP18.43■□□□□ 0.54
RAB11FIP3-211ENST00000495663 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
RAB11FIP3-211ENST00000495663 DCBLD2Q96PD2 775 aa18.4■□□□□ 0.54
RAB11FIP3-211ENST00000495663 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
RAB11FIP3-211ENST00000495663 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
RAB11FIP3-211ENST00000495663 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
RAB11FIP3-211ENST00000495663 WIZO95785 1651 aa18.33■□□□□ 0.52
RAB11FIP3-211ENST00000495663 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
RAB11FIP3-211ENST00000495663 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
RAB11FIP3-211ENST00000495663 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
RAB11FIP3-211ENST00000495663 MS4A3Q96HJ5 214 aa18.26■□□□□ 0.51
RAB11FIP3-211ENST00000495663 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
RAB11FIP3-211ENST00000495663 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
RAB11FIP3-211ENST00000495663 LHX8Q68G74 356 aa18.24■□□□□ 0.51
RAB11FIP3-211ENST00000495663 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
RAB11FIP3-211ENST00000495663 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
RAB11FIP3-211ENST00000495663 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
RAB11FIP3-211ENST00000495663 NUBP1P53384 320 aa18.14■□□□□ 0.49
RAB11FIP3-211ENST00000495663 KIF12Q96FN5 646 aa18.14■□□□□ 0.49
RAB11FIP3-211ENST00000495663 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
RAB11FIP3-211ENST00000495663 MAP3K13O43283 966 aa18.07■□□□□ 0.48
RAB11FIP3-211ENST00000495663 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
RAB11FIP3-211ENST00000495663 VASPP50552 380 aaPredicted RBP18.05■□□□□ 0.48
RAB11FIP3-211ENST00000495663 FAM212AQ96EL1 285 aa18.02■□□□□ 0.48
RAB11FIP3-211ENST00000495663 TRPC6Q9Y210 931 aa18.02■□□□□ 0.48
RAB11FIP3-211ENST00000495663 ATMINO43313 823 aaPredicted RBP18.01■□□□□ 0.47
RAB11FIP3-211ENST00000495663 ASTLQ6HA08 431 aaPredicted RBP17.99■□□□□ 0.47
RAB11FIP3-211ENST00000495663 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
RAB11FIP3-211ENST00000495663 ATN1P54259 1190 aaPredicted RBP17.93■□□□□ 0.46
RAB11FIP3-211ENST00000495663 DCAF8Q5TAQ9 597 aa17.92■□□□□ 0.46
RAB11FIP3-211ENST00000495663 PCDHB13Q9Y5F0 798 aa17.92■□□□□ 0.46
RAB11FIP3-211ENST00000495663 BMP2KQ9NSY1 1161 aaPredicted RBP17.91■□□□□ 0.46
RAB11FIP3-211ENST00000495663 METRNQ9UJH8 293 aa17.9■□□□□ 0.46
RAB11FIP3-211ENST00000495663 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
RAB11FIP3-211ENST00000495663 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
RAB11FIP3-211ENST00000495663 SLC39A7Q92504 469 aa17.85■□□□□ 0.45
RAB11FIP3-211ENST00000495663 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
RAB11FIP3-211ENST00000495663 PYGBP11216 843 aa17.83■□□□□ 0.44
RAB11FIP3-211ENST00000495663 TIE1P35590 1138 aa17.83■□□□□ 0.44
RAB11FIP3-211ENST00000495663 IFNL1Q8IU54 200 aa17.83■□□□□ 0.44
RAB11FIP3-211ENST00000495663 C7P10643 843 aa17.81■□□□□ 0.44
RAB11FIP3-211ENST00000495663 SGIP1Q9BQI5 828 aa17.8■□□□□ 0.44
RAB11FIP3-211ENST00000495663 NESP48681 1621 aa17.8■□□□□ 0.44
RAB11FIP3-211ENST00000495663 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
RAB11FIP3-211ENST00000495663 TTLL13PA6NNM8 815 aa17.79■□□□□ 0.44
RAB11FIP3-211ENST00000495663 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
RAB11FIP3-211ENST00000495663 CFTRP13569 1480 aa17.75■□□□□ 0.43
RAB11FIP3-211ENST00000495663 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
RAB11FIP3-211ENST00000495663 OTUD5Q96G74 571 aa17.74■□□□□ 0.43
RAB11FIP3-211ENST00000495663 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
RAB11FIP3-211ENST00000495663 GSE1Q14687 1217 aa17.68■□□□□ 0.42
RAB11FIP3-211ENST00000495663 TMEM106CQ9BVX2 250 aa17.68■□□□□ 0.42
RAB11FIP3-211ENST00000495663 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
RAB11FIP3-211ENST00000495663 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
RAB11FIP3-211ENST00000495663 POTEJP0CG39 1038 aa17.67■□□□□ 0.42
RAB11FIP3-211ENST00000495663 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
RAB11FIP3-211ENST00000495663 SPOCK2Q92563 424 aa17.66■□□□□ 0.42
RAB11FIP3-211ENST00000495663 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
RAB11FIP3-211ENST00000495663 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
RAB11FIP3-211ENST00000495663 COLQQ9Y215 455 aaPredicted RBP17.61■□□□□ 0.41
RAB11FIP3-211ENST00000495663 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
RAB11FIP3-211ENST00000495663 SEC24BO95487 1268 aa17.59■□□□□ 0.41
RAB11FIP3-211ENST00000495663 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
RAB11FIP3-211ENST00000495663 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
RAB11FIP3-211ENST00000495663 IER5LQ5T953 404 aa17.52■□□□□ 0.4
RAB11FIP3-211ENST00000495663 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
RAB11FIP3-211ENST00000495663 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
RAB11FIP3-211ENST00000495663 MAMSTRQ6ZN01 415 aa17.48■□□□□ 0.39
RAB11FIP3-211ENST00000495663 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
RAB11FIP3-211ENST00000495663 CHRM1P11229 460 aaPredicted RBP17.47■□□□□ 0.39
RAB11FIP3-211ENST00000495663 SCUBE2Q9NQ36 999 aa17.46■□□□□ 0.39
RAB11FIP3-211ENST00000495663 WDR62O43379 1518 aa17.42■□□□□ 0.38
RAB11FIP3-211ENST00000495663 PLCG2P16885 1265 aa17.42■□□□□ 0.38
RAB11FIP3-211ENST00000495663 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
RAB11FIP3-211ENST00000495663 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RAB11FIP3-211ENST00000495663 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
RAB11FIP3-211ENST00000495663 PSEN1P49768 467 aa17.38■□□□□ 0.37
RAB11FIP3-211ENST00000495663 IRX5P78411 483 aaPredicted RBP17.38■□□□□ 0.37
RAB11FIP3-211ENST00000495663 CUX2O14529 1486 aa17.37■□□□□ 0.37
RAB11FIP3-211ENST00000495663 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
RAB11FIP3-211ENST00000495663 CUX1P39880 1505 aa17.32■□□□□ 0.36
RAB11FIP3-211ENST00000495663 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
RAB11FIP3-211ENST00000495663 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
RAB11FIP3-211ENST00000495663 OCEL1Q9H607 264 aa17.31■□□□□ 0.36
RAB11FIP3-211ENST00000495663 PDAP1Q13442 181 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP3-211ENST00000495663 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms