RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 FAM69CQ0P6D2 419 aa31.01■■■□□ 2.55
TMEM53-209ENST00000495630 IGF1RP08069 1367 aa30.98■■■□□ 2.55
TMEM53-209ENST00000495630 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.55
TMEM53-209ENST00000495630 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
TMEM53-209ENST00000495630 ABCC10Q5T3U5 1492 aa30.95■■■□□ 2.54
TMEM53-209ENST00000495630 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
TMEM53-209ENST00000495630 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
TMEM53-209ENST00000495630 MAPKBP1O60336 1514 aa30.87■■■□□ 2.53
TMEM53-209ENST00000495630 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
TMEM53-209ENST00000495630 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
TMEM53-209ENST00000495630 CUL7Q14999 1698 aa30.74■■■□□ 2.51
TMEM53-209ENST00000495630 PTPRGP23470 1445 aa30.74■■■□□ 2.51
TMEM53-209ENST00000495630 DIP2BQ9P265 1576 aa30.74■■■□□ 2.51
TMEM53-209ENST00000495630 CARMIL2Q6F5E8 1435 aa30.65■■■□□ 2.5
TMEM53-209ENST00000495630 TNIKQ9UKE5 1360 aa30.65■■■□□ 2.5
TMEM53-209ENST00000495630 TTBK1Q5TCY1 1321 aaPredicted RBP30.63■■■□□ 2.49
TMEM53-209ENST00000495630 KDM4FA0A1W2PPD8 638 aa30.57■■■□□ 2.48
TMEM53-209ENST00000495630 KDM6BO15054 1643 aa30.56■■■□□ 2.48
TMEM53-209ENST00000495630 ABCC2Q92887 1545 aa30.55■■■□□ 2.48
TMEM53-209ENST00000495630 PLB1Q6P1J6 1458 aa30.5■■■□□ 2.47
TMEM53-209ENST00000495630 ASXL2Q76L83 1435 aa30.49■■■□□ 2.47
TMEM53-209ENST00000495630 TSPOAP1O95153 1857 aa30.49■■■□□ 2.47
TMEM53-209ENST00000495630 UHRF1BP1LA0JNW5 1464 aa30.48■■■□□ 2.47
TMEM53-209ENST00000495630 IQGAP2Q13576 1575 aa30.48■■■□□ 2.47
TMEM53-209ENST00000495630 UACAQ9BZF9 1416 aa30.47■■■□□ 2.47
TMEM53-209ENST00000495630 DISP1Q96F81 1524 aa30.41■■■□□ 2.46
TMEM53-209ENST00000495630 GLI2P10070 1586 aa30.41■■■□□ 2.46
TMEM53-209ENST00000495630 RAPGEF2Q9Y4G8 1499 aa30.38■■■□□ 2.45
TMEM53-209ENST00000495630 UGGT2Q9NYU1 1516 aa30.33■■■□□ 2.45
TMEM53-209ENST00000495630 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
TMEM53-209ENST00000495630 EPRSP07814 1512 aaKnown RBP30.29■■■□□ 2.44
TMEM53-209ENST00000495630 PPRC1Q5VV67 1664 aaKnown RBP30.27■■■□□ 2.44
TMEM53-209ENST00000495630 COL17A1Q9UMD9 1497 aaPredicted RBP30.23■■■□□ 2.43
TMEM53-209ENST00000495630 TEX14Q8IWB6 1497 aa30.21■■■□□ 2.43
TMEM53-209ENST00000495630 KIAA0556O60303 1618 aa30.18■■■□□ 2.42
TMEM53-209ENST00000495630 MAP3K4Q9Y6R4 1608 aa30.16■■■□□ 2.42
TMEM53-209ENST00000495630 ZCCHC11Q5TAX3 1644 aaKnown RBP30.15■■■□□ 2.42
TMEM53-209ENST00000495630 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
TMEM53-209ENST00000495630 WDR7Q9Y4E6 1490 aa30.12■■■□□ 2.41
TMEM53-209ENST00000495630 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
TMEM53-209ENST00000495630 KCNH8Q96L42 1107 aa30.06■■■□□ 2.4
TMEM53-209ENST00000495630 CD109Q6YHK3 1445 aa30.04■■■□□ 2.4
TMEM53-209ENST00000495630 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.39
TMEM53-209ENST00000495630 MAGI3Q5TCQ9 1506 aa30■■■□□ 2.39
TMEM53-209ENST00000495630 PRXQ9BXM0 1461 aa29.99■■■□□ 2.39
TMEM53-209ENST00000495630 ABCA8O94911 1581 aa29.98■■■□□ 2.39
TMEM53-209ENST00000495630 ILDR1Q86SU0 546 aaPredicted RBP29.96■■■□□ 2.39
TMEM53-209ENST00000495630 CTTNBP2Q8WZ74 1663 aa29.95■■■□□ 2.39
TMEM53-209ENST00000495630 CFAP43Q8NDM7 1665 aa29.88■■■□□ 2.37
TMEM53-209ENST00000495630 P3H3Q8IVL6 736 aa29.85■■■□□ 2.37
TMEM53-209ENST00000495630 ATP10BO94823 1461 aa29.81■■■□□ 2.36
TMEM53-209ENST00000495630 ARID3CA6NKF2 412 aa29.8■■■□□ 2.36
TMEM53-209ENST00000495630 PHLDB1Q86UU1 1377 aa29.78■■■□□ 2.36
TMEM53-209ENST00000495630 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
TMEM53-209ENST00000495630 HECW2Q9P2P5 1572 aa29.77■■■□□ 2.36
TMEM53-209ENST00000495630 ARAP3Q8WWN8 1544 aa29.77■■■□□ 2.36
TMEM53-209ENST00000495630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.66■■■□□ 2.34
TMEM53-209ENST00000495630 HNRNPUL2Q1KMD3 747 aaKnown RBP29.66■■■□□ 2.34
TMEM53-209ENST00000495630 RAPGEF3O95398 923 aa29.63■■■□□ 2.33
TMEM53-209ENST00000495630 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
TMEM53-209ENST00000495630 NEO1Q92859 1461 aa29.6■■■□□ 2.33
TMEM53-209ENST00000495630 SAMD9Q5K651 1589 aa29.6■■■□□ 2.33
TMEM53-209ENST00000495630 KIF21BO75037 1637 aa29.59■■■□□ 2.33
TMEM53-209ENST00000495630 PLEKHD1A6NEE1 506 aa29.55■■■□□ 2.32
TMEM53-209ENST00000495630 RAPGEF6Q8TEU7 1601 aa29.55■■■□□ 2.32
TMEM53-209ENST00000495630 RANGAP1P46060 587 aaPredicted RBP29.52■■■□□ 2.32
TMEM53-209ENST00000495630 EEA1Q15075 1411 aa29.52■■■□□ 2.32
TMEM53-209ENST00000495630 NUP153P49790 1475 aaKnown RBP29.5■■■□□ 2.31
TMEM53-209ENST00000495630 PTPRMP28827 1452 aa29.49■■■□□ 2.31
TMEM53-209ENST00000495630 ARID4BQ4LE39 1312 aaPredicted RBP29.48■■■□□ 2.31
TMEM53-209ENST00000495630 ADAMTSL3P82987 1691 aa29.45■■■□□ 2.31
TMEM53-209ENST00000495630 FHOD3Q2V2M9 1422 aa29.45■■■□□ 2.3
TMEM53-209ENST00000495630 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
TMEM53-209ENST00000495630 AKNAQ7Z591 1439 aa29.38■■■□□ 2.29
TMEM53-209ENST00000495630 FBXO41Q8TF61 875 aa29.38■■■□□ 2.29
TMEM53-209ENST00000495630 FRMPD1Q5SYB0 1578 aa29.37■■■□□ 2.29
TMEM53-209ENST00000495630 FANCAO15360 1455 aa29.33■■■□□ 2.29
TMEM53-209ENST00000495630 BCORL1Q5H9F3 1711 aa29.33■■■□□ 2.29
TMEM53-209ENST00000495630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.29■■■□□ 2.28
TMEM53-209ENST00000495630 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
TMEM53-209ENST00000495630 MADDQ8WXG6 1647 aa29.26■■■□□ 2.27
TMEM53-209ENST00000495630 POGZQ7Z3K3 1410 aa29.25■■■□□ 2.27
TMEM53-209ENST00000495630 ARHGEF40Q8TER5 1519 aa29.25■■■□□ 2.27
TMEM53-209ENST00000495630 CFAP74Q9C0B2 1584 aa29.23■■■□□ 2.27
TMEM53-209ENST00000495630 RICTORQ6R327 1708 aa29.23■■■□□ 2.27
TMEM53-209ENST00000495630 PCF11O94913 1555 aaKnown RBP29.22■■■□□ 2.27
TMEM53-209ENST00000495630 MAGI2Q86UL8 1455 aa29.22■■■□□ 2.27
TMEM53-209ENST00000495630 LMTK3Q96Q04 1460 aa29.22■■■□□ 2.27
TMEM53-209ENST00000495630 PLCH2O75038 1416 aa29.2■■■□□ 2.26
TMEM53-209ENST00000495630 ZMYM4Q5VZL5 1548 aa29.18■■■□□ 2.26
TMEM53-209ENST00000495630 YEATS2Q9ULM3 1422 aa29.17■■■□□ 2.26
TMEM53-209ENST00000495630 UBTFP17480 764 aaKnown RBP29.16■■■□□ 2.26
TMEM53-209ENST00000495630 SCAPERQ9BY12 1400 aa29.16■■■□□ 2.26
TMEM53-209ENST00000495630 TTC37Q6PGP7 1564 aa29.16■■■□□ 2.26
TMEM53-209ENST00000495630 EFCAB2Q5VUJ9 269 aa29.15■■■□□ 2.26
TMEM53-209ENST00000495630 ATP1B4Q9UN42 357 aaPredicted RBP29.15■■■□□ 2.26
TMEM53-209ENST00000495630 CDK11AQ9UQ88 783 aaPredicted RBP29.15■■■□□ 2.26
TMEM53-209ENST00000495630 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
TMEM53-209ENST00000495630 ZFYVE16Q7Z3T8 1539 aa29.15■■■□□ 2.26
TMEM53-209ENST00000495630 PLPPR3Q6T4P5 718 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms