RNA–Protein interactions for RNA: ENST00000495373.5

ARHGEF3-212, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-212ENST00000495373 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
ARHGEF3-212ENST00000495373 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
ARHGEF3-212ENST00000495373 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
ARHGEF3-212ENST00000495373 P3H3Q8IVL6 736 aa23.6■■□□□ 1.37
ARHGEF3-212ENST00000495373 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.36
ARHGEF3-212ENST00000495373 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
ARHGEF3-212ENST00000495373 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
ARHGEF3-212ENST00000495373 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
ARHGEF3-212ENST00000495373 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
ARHGEF3-212ENST00000495373 FBLN2P98095 1184 aa23.5■■□□□ 1.35
ARHGEF3-212ENST00000495373 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF3-212ENST00000495373 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
ARHGEF3-212ENST00000495373 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
ARHGEF3-212ENST00000495373 CEP170Q5SW79 1584 aa23.47■■□□□ 1.35
ARHGEF3-212ENST00000495373 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
ARHGEF3-212ENST00000495373 KIAA0586Q9BVV6 1533 aa23.41■■□□□ 1.34
ARHGEF3-212ENST00000495373 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.34
ARHGEF3-212ENST00000495373 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
ARHGEF3-212ENST00000495373 NUP160Q12769 1436 aa23.38■■□□□ 1.33
ARHGEF3-212ENST00000495373 CHD1O14646 1710 aa23.36■■□□□ 1.33
ARHGEF3-212ENST00000495373 UGGT2Q9NYU1 1516 aa23.35■■□□□ 1.33
ARHGEF3-212ENST00000495373 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
ARHGEF3-212ENST00000495373 APLP2Q06481 763 aa23.32■■□□□ 1.32
ARHGEF3-212ENST00000495373 KIAA0556O60303 1618 aa23.27■■□□□ 1.32
ARHGEF3-212ENST00000495373 CASKIN1Q8WXD9 1431 aa23.27■■□□□ 1.32
ARHGEF3-212ENST00000495373 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
ARHGEF3-212ENST00000495373 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
ARHGEF3-212ENST00000495373 ATP1B4Q9UN42 357 aaPredicted RBP23.26■■□□□ 1.31
ARHGEF3-212ENST00000495373 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
ARHGEF3-212ENST00000495373 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
ARHGEF3-212ENST00000495373 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
ARHGEF3-212ENST00000495373 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
ARHGEF3-212ENST00000495373 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
ARHGEF3-212ENST00000495373 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
ARHGEF3-212ENST00000495373 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
ARHGEF3-212ENST00000495373 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.29
ARHGEF3-212ENST00000495373 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
ARHGEF3-212ENST00000495373 CDK13Q14004 1512 aaKnown RBP23.06■■□□□ 1.28
ARHGEF3-212ENST00000495373 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
ARHGEF3-212ENST00000495373 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
ARHGEF3-212ENST00000495373 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
ARHGEF3-212ENST00000495373 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
ARHGEF3-212ENST00000495373 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
ARHGEF3-212ENST00000495373 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
ARHGEF3-212ENST00000495373 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
ARHGEF3-212ENST00000495373 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
ARHGEF3-212ENST00000495373 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
ARHGEF3-212ENST00000495373 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
ARHGEF3-212ENST00000495373 RRBP1Q9P2E9 1410 aaKnown RBP22.97■■□□□ 1.27
ARHGEF3-212ENST00000495373 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
ARHGEF3-212ENST00000495373 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
ARHGEF3-212ENST00000495373 MTUS2Q5JR59 1369 aa22.95■■□□□ 1.26
ARHGEF3-212ENST00000495373 ABCA8O94911 1581 aa22.93■■□□□ 1.26
ARHGEF3-212ENST00000495373 CCNB3Q8WWL7 1395 aa22.9■■□□□ 1.26
ARHGEF3-212ENST00000495373 PTPRGP23470 1445 aa22.89■■□□□ 1.26
ARHGEF3-212ENST00000495373 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.26
ARHGEF3-212ENST00000495373 HRCP23327 699 aa22.89■■□□□ 1.26
ARHGEF3-212ENST00000495373 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
ARHGEF3-212ENST00000495373 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
ARHGEF3-212ENST00000495373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
ARHGEF3-212ENST00000495373 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
ARHGEF3-212ENST00000495373 ATP10BO94823 1461 aa22.81■■□□□ 1.24
ARHGEF3-212ENST00000495373 ITGAEP38570 1179 aa22.79■■□□□ 1.24
ARHGEF3-212ENST00000495373 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
ARHGEF3-212ENST00000495373 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
ARHGEF3-212ENST00000495373 UACAQ9BZF9 1416 aa22.77■■□□□ 1.23
ARHGEF3-212ENST00000495373 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
ARHGEF3-212ENST00000495373 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
ARHGEF3-212ENST00000495373 KIF14Q15058 1648 aa22.73■■□□□ 1.23
ARHGEF3-212ENST00000495373 TROQ12816 1431 aaPredicted RBP22.72■■□□□ 1.23
ARHGEF3-212ENST00000495373 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
ARHGEF3-212ENST00000495373 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
ARHGEF3-212ENST00000495373 PTPN23Q9H3S7 1636 aa22.66■■□□□ 1.22
ARHGEF3-212ENST00000495373 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
ARHGEF3-212ENST00000495373 ADCY10Q96PN6 1610 aa22.65■■□□□ 1.22
ARHGEF3-212ENST00000495373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
ARHGEF3-212ENST00000495373 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
ARHGEF3-212ENST00000495373 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
ARHGEF3-212ENST00000495373 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
ARHGEF3-212ENST00000495373 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF3-212ENST00000495373 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
ARHGEF3-212ENST00000495373 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
ARHGEF3-212ENST00000495373 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
ARHGEF3-212ENST00000495373 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
ARHGEF3-212ENST00000495373 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.2
ARHGEF3-212ENST00000495373 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
ARHGEF3-212ENST00000495373 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
ARHGEF3-212ENST00000495373 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
ARHGEF3-212ENST00000495373 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
ARHGEF3-212ENST00000495373 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
ARHGEF3-212ENST00000495373 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
ARHGEF3-212ENST00000495373 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
ARHGEF3-212ENST00000495373 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF3-212ENST00000495373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.19
ARHGEF3-212ENST00000495373 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
ARHGEF3-212ENST00000495373 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
ARHGEF3-212ENST00000495373 CHIC2Q9UKJ5 165 aa22.47■■□□□ 1.19
ARHGEF3-212ENST00000495373 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
ARHGEF3-212ENST00000495373 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF3-212ENST00000495373 CDC42BPBQ9Y5S2 1711 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms