RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
FGD4-208ENST00000494977 KLHL34Q8N239 644 aa8.6□□□□□ -1.03
FGD4-208ENST00000494977 PPP4R2Q9NY27 417 aa8.59□□□□□ -1.03
FGD4-208ENST00000494977 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
FGD4-208ENST00000494977 WRNQ14191 1432 aaPredicted RBP eCLIP8.57□□□□□ -1.04
FGD4-208ENST00000494977 HSP90AA1P07900 732 aaKnown RBP8.57□□□□□ -1.04
FGD4-208ENST00000494977 GSE1Q14687 1217 aa8.57□□□□□ -1.04
FGD4-208ENST00000494977 ZNF326Q5BKZ1 582 aaKnown RBP8.57□□□□□ -1.04
FGD4-208ENST00000494977 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
FGD4-208ENST00000494977 PIAS4Q8N2W9 510 aaPredicted RBP8.54□□□□□ -1.04
FGD4-208ENST00000494977 KCNA4P22459 653 aa8.52□□□□□ -1.05
FGD4-208ENST00000494977 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
FGD4-208ENST00000494977 CALD1Q05682 793 aaKnown RBP8.51□□□□□ -1.05
FGD4-208ENST00000494977 TRIM52Q96A61 297 aa8.49□□□□□ -1.05
FGD4-208ENST00000494977 EHMT2Q96KQ7 1210 aa8.49□□□□□ -1.05
FGD4-208ENST00000494977 CENPJQ9HC77 1338 aaPredicted RBP8.49□□□□□ -1.05
FGD4-208ENST00000494977 EEA1Q15075 1411 aa8.48□□□□□ -1.05
FGD4-208ENST00000494977 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
FGD4-208ENST00000494977 NAP1L5Q96NT1 182 aaPredicted RBP8.48□□□□□ -1.05
FGD4-208ENST00000494977 NAP1L2Q9ULW6 460 aaPredicted RBP8.47□□□□□ -1.05
FGD4-208ENST00000494977 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
FGD4-208ENST00000494977 PRDM4Q9UKN5 801 aa8.46□□□□□ -1.06
FGD4-208ENST00000494977 LAS1LQ9Y4W2 734 aaKnown RBP8.46□□□□□ -1.06
FGD4-208ENST00000494977 NCLP19338 710 aaKnown RBP8.45□□□□□ -1.06
FGD4-208ENST00000494977 IRX6P78412 446 aaPredicted RBP8.45□□□□□ -1.06
FGD4-208ENST00000494977 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
FGD4-208ENST00000494977 FRAT1Q92837 279 aaPredicted RBP8.44□□□□□ -1.06
FGD4-208ENST00000494977 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
FGD4-208ENST00000494977 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
FGD4-208ENST00000494977 CANXP27824 592 aaKnown RBP8.43□□□□□ -1.06
FGD4-208ENST00000494977 HNRNPUL2Q1KMD3 747 aaKnown RBP8.43□□□□□ -1.06
FGD4-208ENST00000494977 IPO4Q8TEX9 1081 aaKnown RBP8.43□□□□□ -1.06
FGD4-208ENST00000494977 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
FGD4-208ENST00000494977 ANP32CO43423 234 aa8.42□□□□□ -1.06
FGD4-208ENST00000494977 BRD2P25440 801 aaKnown RBP8.42□□□□□ -1.06
FGD4-208ENST00000494977 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
FGD4-208ENST00000494977 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
FGD4-208ENST00000494977 RGS3P49796 1198 aa8.41□□□□□ -1.06
FGD4-208ENST00000494977 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
FGD4-208ENST00000494977 NACADO15069 1562 aa8.39□□□□□ -1.07
FGD4-208ENST00000494977 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
FGD4-208ENST00000494977 NFKBIBQ15653 356 aa8.38□□□□□ -1.07
FGD4-208ENST00000494977 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
FGD4-208ENST00000494977 CLCN1P35523 988 aa8.37□□□□□ -1.07
FGD4-208ENST00000494977 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
FGD4-208ENST00000494977 DDX10Q13206 875 aaKnown RBP8.37□□□□□ -1.07
FGD4-208ENST00000494977 TPM2P07951 284 aa8.36□□□□□ -1.07
FGD4-208ENST00000494977 L1TD1Q5T7N2 865 aaKnown RBP8.36□□□□□ -1.07
FGD4-208ENST00000494977 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
FGD4-208ENST00000494977 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
FGD4-208ENST00000494977 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
FGD4-208ENST00000494977 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
FGD4-208ENST00000494977 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
FGD4-208ENST00000494977 NPM2Q86SE8 214 aaKnown RBP8.34□□□□□ -1.07
FGD4-208ENST00000494977 PPP1R15AO75807 674 aaPredicted RBP8.32□□□□□ -1.08
FGD4-208ENST00000494977 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
FGD4-208ENST00000494977 SMAP1Q8IYB5 467 aaPredicted RBP8.32□□□□□ -1.08
FGD4-208ENST00000494977 MAP7D2Q96T17 732 aa8.32□□□□□ -1.08
FGD4-208ENST00000494977 PPP4R3CPQ6ZMV5 832 aa8.31□□□□□ -1.08
FGD4-208ENST00000494977 FTSJ3Q8IY81 847 aaKnown RBP8.31□□□□□ -1.08
FGD4-208ENST00000494977 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
FGD4-208ENST00000494977 TCERG1O14776 1098 aaKnown RBP8.3□□□□□ -1.08
FGD4-208ENST00000494977 DHX37Q8IY37 1157 aaKnown RBP8.29□□□□□ -1.08
FGD4-208ENST00000494977 NCAPD3P42695 1498 aa8.29□□□□□ -1.08
FGD4-208ENST00000494977 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
FGD4-208ENST00000494977 TEX2Q8IWB9 1127 aa8.29□□□□□ -1.08
FGD4-208ENST00000494977 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
FGD4-208ENST00000494977 UTP14CQ5TAP6 766 aaKnown RBP8.28□□□□□ -1.08
FGD4-208ENST00000494977 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
FGD4-208ENST00000494977 MS4A1P11836 297 aa8.26□□□□□ -1.09
FGD4-208ENST00000494977 ZFP91Q96JP5 570 aaPredicted RBP8.26□□□□□ -1.09
FGD4-208ENST00000494977 PDE4AP27815 886 aa8.25□□□□□ -1.09
FGD4-208ENST00000494977 MTERF4Q7Z6M4 381 aaKnown RBP8.25□□□□□ -1.09
FGD4-208ENST00000494977 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
FGD4-208ENST00000494977 BCCIPQ9P287 314 aaKnown RBP eCLIP8.25□□□□□ -1.09
FGD4-208ENST00000494977 CHRM1P11229 460 aaPredicted RBP8.24□□□□□ -1.09
FGD4-208ENST00000494977 VGFO15240 615 aaPredicted RBP8.22□□□□□ -1.09
FGD4-208ENST00000494977 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
FGD4-208ENST00000494977 ZHX1Q9UKY1 873 aaPredicted RBP8.22□□□□□ -1.09
FGD4-208ENST00000494977 PEG3Q9GZU2 1588 aa8.21□□□□□ -1.09
FGD4-208ENST00000494977 DMTNQ08495 405 aa8.21□□□□□ -1.1
FGD4-208ENST00000494977 TAF3Q5VWG9 929 aa8.21□□□□□ -1.1
FGD4-208ENST00000494977 TMEM51Q9NW97 253 aa8.21□□□□□ -1.1
FGD4-208ENST00000494977 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
FGD4-208ENST00000494977 TERF1P54274 439 aa8.2□□□□□ -1.1
FGD4-208ENST00000494977 RB1CC1Q8TDY2 1594 aa8.2□□□□□ -1.1
FGD4-208ENST00000494977 KIF20AO95235 890 aa8.2□□□□□ -1.1
FGD4-208ENST00000494977 PPP4R3BQ5MIZ7 849 aa8.2□□□□□ -1.1
FGD4-208ENST00000494977 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
FGD4-208ENST00000494977 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
FGD4-208ENST00000494977 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
FGD4-208ENST00000494977 ESPNB1AK53 854 aa8.19□□□□□ -1.1
FGD4-208ENST00000494977 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
FGD4-208ENST00000494977 GOLGA6L3A6NEY3 463 aa8.19□□□□□ -1.1
FGD4-208ENST00000494977 ZNF830Q96NB3 372 aaPredicted RBP8.19□□□□□ -1.1
FGD4-208ENST00000494977 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
FGD4-208ENST00000494977 ABCC9O60706 1549 aa8.18□□□□□ -1.1
FGD4-208ENST00000494977 TULP1O00294 542 aaPredicted RBP8.18□□□□□ -1.1
FGD4-208ENST00000494977 SIN3AQ96ST3 1273 aa8.18□□□□□ -1.1
FGD4-208ENST00000494977 HAP1P54257 671 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms