RNA–Protein interactions for RNA: ENST00000494810.1

PDCD6IP-215, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-215ENST00000494810 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
PDCD6IP-215ENST00000494810 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
PDCD6IP-215ENST00000494810 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
PDCD6IP-215ENST00000494810 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
PDCD6IP-215ENST00000494810 NCAPD3P42695 1498 aa12.02□□□□□ -0.48
PDCD6IP-215ENST00000494810 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
PDCD6IP-215ENST00000494810 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
PDCD6IP-215ENST00000494810 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
PDCD6IP-215ENST00000494810 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
PDCD6IP-215ENST00000494810 BAZ1AQ9NRL2 1556 aaPredicted RBP11.97□□□□□ -0.49
PDCD6IP-215ENST00000494810 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
PDCD6IP-215ENST00000494810 HMGXB3Q12766 1538 aa11.96□□□□□ -0.5
PDCD6IP-215ENST00000494810 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
PDCD6IP-215ENST00000494810 PROM2Q8N271 834 aa11.94□□□□□ -0.5
PDCD6IP-215ENST00000494810 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
PDCD6IP-215ENST00000494810 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
PDCD6IP-215ENST00000494810 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
PDCD6IP-215ENST00000494810 BAZ1BQ9UIG0 1483 aaKnown RBP11.88□□□□□ -0.51
PDCD6IP-215ENST00000494810 NESP48681 1621 aa11.82□□□□□ -0.52
PDCD6IP-215ENST00000494810 WIZO95785 1651 aa11.8□□□□□ -0.52
PDCD6IP-215ENST00000494810 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
PDCD6IP-215ENST00000494810 CUX2O14529 1486 aa11.76□□□□□ -0.53
PDCD6IP-215ENST00000494810 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
PDCD6IP-215ENST00000494810 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
PDCD6IP-215ENST00000494810 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
PDCD6IP-215ENST00000494810 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
PDCD6IP-215ENST00000494810 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
PDCD6IP-215ENST00000494810 KIF21AQ7Z4S6 1674 aa11.72□□□□□ -0.53
PDCD6IP-215ENST00000494810 PELP1Q8IZL8 1130 aaKnown RBP11.72□□□□□ -0.53
PDCD6IP-215ENST00000494810 MIER1Q8N108 512 aa11.71□□□□□ -0.53
PDCD6IP-215ENST00000494810 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
PDCD6IP-215ENST00000494810 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
PDCD6IP-215ENST00000494810 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
PDCD6IP-215ENST00000494810 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
PDCD6IP-215ENST00000494810 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
PDCD6IP-215ENST00000494810 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
PDCD6IP-215ENST00000494810 C7P10643 843 aa11.67□□□□□ -0.54
PDCD6IP-215ENST00000494810 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
PDCD6IP-215ENST00000494810 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
PDCD6IP-215ENST00000494810 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.55
PDCD6IP-215ENST00000494810 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
PDCD6IP-215ENST00000494810 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
PDCD6IP-215ENST00000494810 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
PDCD6IP-215ENST00000494810 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
PDCD6IP-215ENST00000494810 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
PDCD6IP-215ENST00000494810 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
PDCD6IP-215ENST00000494810 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
PDCD6IP-215ENST00000494810 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
PDCD6IP-215ENST00000494810 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
PDCD6IP-215ENST00000494810 MAP3K13O43283 966 aa11.56□□□□□ -0.56
PDCD6IP-215ENST00000494810 CFTRP13569 1480 aa11.56□□□□□ -0.56
PDCD6IP-215ENST00000494810 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
PDCD6IP-215ENST00000494810 TIE1P35590 1138 aa11.54□□□□□ -0.56
PDCD6IP-215ENST00000494810 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
PDCD6IP-215ENST00000494810 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
PDCD6IP-215ENST00000494810 WDR62O43379 1518 aa11.54□□□□□ -0.56
PDCD6IP-215ENST00000494810 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.56
PDCD6IP-215ENST00000494810 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.56
PDCD6IP-215ENST00000494810 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
PDCD6IP-215ENST00000494810 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
PDCD6IP-215ENST00000494810 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
PDCD6IP-215ENST00000494810 CCDC88BA6NC98 1476 aa11.49□□□□□ -0.57
PDCD6IP-215ENST00000494810 NUBP1P53384 320 aa11.47□□□□□ -0.57
PDCD6IP-215ENST00000494810 FKBP8Q14318 412 aa11.47□□□□□ -0.57
PDCD6IP-215ENST00000494810 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
PDCD6IP-215ENST00000494810 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
PDCD6IP-215ENST00000494810 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
PDCD6IP-215ENST00000494810 POTEMA6NI47 508 aa11.44□□□□□ -0.58
PDCD6IP-215ENST00000494810 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
PDCD6IP-215ENST00000494810 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
PDCD6IP-215ENST00000494810 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
PDCD6IP-215ENST00000494810 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
PDCD6IP-215ENST00000494810 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
PDCD6IP-215ENST00000494810 SEC24BO95487 1268 aa11.39□□□□□ -0.59
PDCD6IP-215ENST00000494810 IER5LQ5T953 404 aa11.39□□□□□ -0.59
PDCD6IP-215ENST00000494810 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
PDCD6IP-215ENST00000494810 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
PDCD6IP-215ENST00000494810 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
PDCD6IP-215ENST00000494810 IFNL1Q8IU54 200 aa11.35□□□□□ -0.59
PDCD6IP-215ENST00000494810 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
PDCD6IP-215ENST00000494810 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
PDCD6IP-215ENST00000494810 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
PDCD6IP-215ENST00000494810 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
PDCD6IP-215ENST00000494810 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
PDCD6IP-215ENST00000494810 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
PDCD6IP-215ENST00000494810 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
PDCD6IP-215ENST00000494810 IFT140Q96RY7 1462 aa11.29□□□□□ -0.6
PDCD6IP-215ENST00000494810 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
PDCD6IP-215ENST00000494810 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
PDCD6IP-215ENST00000494810 TARBP1Q13395 1621 aaKnown RBP11.26□□□□□ -0.61
PDCD6IP-215ENST00000494810 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
PDCD6IP-215ENST00000494810 PLCG2P16885 1265 aa11.23□□□□□ -0.61
PDCD6IP-215ENST00000494810 POLA1P09884 1462 aaPredicted RBP11.22□□□□□ -0.61
PDCD6IP-215ENST00000494810 PYGBP11216 843 aa11.22□□□□□ -0.61
PDCD6IP-215ENST00000494810 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
PDCD6IP-215ENST00000494810 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
PDCD6IP-215ENST00000494810 CUX1P39880 1505 aa11.19□□□□□ -0.62
PDCD6IP-215ENST00000494810 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDCD6IP-215ENST00000494810 RAD54L2Q9Y4B4 1467 aa11.18□□□□□ -0.62
PDCD6IP-215ENST00000494810 CHD1O14646 1710 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms