RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
CSNK1E-212ENST00000494610 FAM69CQ0P6D2 419 aa20.82■□□□□ 0.92
CSNK1E-212ENST00000494610 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
CSNK1E-212ENST00000494610 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
CSNK1E-212ENST00000494610 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
CSNK1E-212ENST00000494610 NPM1P06748 294 aaKnown RBP eCLIP20.72■□□□□ 0.91
CSNK1E-212ENST00000494610 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
CSNK1E-212ENST00000494610 IGF1RP08069 1367 aa20.71■□□□□ 0.91
CSNK1E-212ENST00000494610 MAPKBP1O60336 1514 aa20.7■□□□□ 0.9
CSNK1E-212ENST00000494610 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
CSNK1E-212ENST00000494610 KIAA0586Q9BVV6 1533 aa20.67■□□□□ 0.9
CSNK1E-212ENST00000494610 KDM4FA0A1W2PPD8 638 aa20.64■□□□□ 0.89
CSNK1E-212ENST00000494610 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
CSNK1E-212ENST00000494610 KDM6BO15054 1643 aa20.6■□□□□ 0.89
CSNK1E-212ENST00000494610 CUL7Q14999 1698 aa20.58■□□□□ 0.88
CSNK1E-212ENST00000494610 PTPRGP23470 1445 aa20.57■□□□□ 0.88
CSNK1E-212ENST00000494610 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
CSNK1E-212ENST00000494610 ASXL2Q76L83 1435 aa20.48■□□□□ 0.87
CSNK1E-212ENST00000494610 PPRC1Q5VV67 1664 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-212ENST00000494610 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
CSNK1E-212ENST00000494610 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
CSNK1E-212ENST00000494610 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
CSNK1E-212ENST00000494610 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
CSNK1E-212ENST00000494610 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
CSNK1E-212ENST00000494610 COL17A1Q9UMD9 1497 aaPredicted RBP20.41■□□□□ 0.86
CSNK1E-212ENST00000494610 UACAQ9BZF9 1416 aa20.38■□□□□ 0.85
CSNK1E-212ENST00000494610 PLB1Q6P1J6 1458 aa20.37■□□□□ 0.85
CSNK1E-212ENST00000494610 GLI2P10070 1586 aa20.37■□□□□ 0.85
CSNK1E-212ENST00000494610 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
CSNK1E-212ENST00000494610 ADGRL1O94910 1474 aa20.34■□□□□ 0.85
CSNK1E-212ENST00000494610 EPRSP07814 1512 aaKnown RBP20.33■□□□□ 0.85
CSNK1E-212ENST00000494610 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
CSNK1E-212ENST00000494610 KDM5BQ9UGL1 1544 aa20.31■□□□□ 0.84
CSNK1E-212ENST00000494610 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
CSNK1E-212ENST00000494610 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
CSNK1E-212ENST00000494610 UGGT2Q9NYU1 1516 aa20.29■□□□□ 0.84
CSNK1E-212ENST00000494610 RAPGEF2Q9Y4G8 1499 aa20.29■□□□□ 0.84
CSNK1E-212ENST00000494610 KIAA0556O60303 1618 aa20.28■□□□□ 0.84
CSNK1E-212ENST00000494610 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
CSNK1E-212ENST00000494610 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
CSNK1E-212ENST00000494610 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
CSNK1E-212ENST00000494610 ARID3CA6NKF2 412 aa20.16■□□□□ 0.82
CSNK1E-212ENST00000494610 HECW2Q9P2P5 1572 aa20.16■□□□□ 0.82
CSNK1E-212ENST00000494610 CTTNBP2Q8WZ74 1663 aa20.15■□□□□ 0.82
CSNK1E-212ENST00000494610 ABCA8O94911 1581 aa20.12■□□□□ 0.81
CSNK1E-212ENST00000494610 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
CSNK1E-212ENST00000494610 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
CSNK1E-212ENST00000494610 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
CSNK1E-212ENST00000494610 MAGI3Q5TCQ9 1506 aa20.06■□□□□ 0.8
CSNK1E-212ENST00000494610 KIF21BO75037 1637 aa20.05■□□□□ 0.8
CSNK1E-212ENST00000494610 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
CSNK1E-212ENST00000494610 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
CSNK1E-212ENST00000494610 ATP10BO94823 1461 aa19.99■□□□□ 0.79
CSNK1E-212ENST00000494610 RAPGEF3O95398 923 aa19.94■□□□□ 0.78
CSNK1E-212ENST00000494610 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
CSNK1E-212ENST00000494610 ARAP3Q8WWN8 1544 aa19.92■□□□□ 0.78
CSNK1E-212ENST00000494610 ABCA9Q8IUA7 1624 aa19.88■□□□□ 0.77
CSNK1E-212ENST00000494610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
CSNK1E-212ENST00000494610 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
CSNK1E-212ENST00000494610 SAMD9Q5K651 1589 aa19.85■□□□□ 0.77
CSNK1E-212ENST00000494610 ADAMTSL3P82987 1691 aa19.84■□□□□ 0.77
CSNK1E-212ENST00000494610 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
CSNK1E-212ENST00000494610 PTPRMP28827 1452 aa19.84■□□□□ 0.77
CSNK1E-212ENST00000494610 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
CSNK1E-212ENST00000494610 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
CSNK1E-212ENST00000494610 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
CSNK1E-212ENST00000494610 ARID4BQ4LE39 1312 aaPredicted RBP19.79■□□□□ 0.76
CSNK1E-212ENST00000494610 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
CSNK1E-212ENST00000494610 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
CSNK1E-212ENST00000494610 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
CSNK1E-212ENST00000494610 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
CSNK1E-212ENST00000494610 NEO1Q92859 1461 aa19.76■□□□□ 0.75
CSNK1E-212ENST00000494610 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
CSNK1E-212ENST00000494610 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
CSNK1E-212ENST00000494610 FBXO41Q8TF61 875 aa19.72■□□□□ 0.75
CSNK1E-212ENST00000494610 SIGLEC1Q9BZZ2 1709 aa19.71■□□□□ 0.75
CSNK1E-212ENST00000494610 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
CSNK1E-212ENST00000494610 LMTK3Q96Q04 1460 aa19.7■□□□□ 0.74
CSNK1E-212ENST00000494610 RICTORQ6R327 1708 aa19.69■□□□□ 0.74
CSNK1E-212ENST00000494610 HSPA2P54652 639 aa19.69■□□□□ 0.74
CSNK1E-212ENST00000494610 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
CSNK1E-212ENST00000494610 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
CSNK1E-212ENST00000494610 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
CSNK1E-212ENST00000494610 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
CSNK1E-212ENST00000494610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.67■□□□□ 0.74
CSNK1E-212ENST00000494610 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
CSNK1E-212ENST00000494610 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
CSNK1E-212ENST00000494610 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
CSNK1E-212ENST00000494610 YEATS2Q9ULM3 1422 aa19.66■□□□□ 0.74
CSNK1E-212ENST00000494610 FANCAO15360 1455 aa19.65■□□□□ 0.74
CSNK1E-212ENST00000494610 MLECQ14165 292 aa19.64■□□□□ 0.73
CSNK1E-212ENST00000494610 CDK13Q14004 1512 aaKnown RBP19.64■□□□□ 0.73
CSNK1E-212ENST00000494610 ZFYVE16Q7Z3T8 1539 aa19.57■□□□□ 0.72
CSNK1E-212ENST00000494610 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
CSNK1E-212ENST00000494610 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
CSNK1E-212ENST00000494610 ZMYM4Q5VZL5 1548 aa19.56■□□□□ 0.72
CSNK1E-212ENST00000494610 CFAP74Q9C0B2 1584 aa19.55■□□□□ 0.72
CSNK1E-212ENST00000494610 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
CSNK1E-212ENST00000494610 EEA1Q15075 1411 aa19.53■□□□□ 0.72
CSNK1E-212ENST00000494610 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms