RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
FN1-225ENST00000494446 NUP160Q12769 1436 aa12.78□□□□□ -0.36
FN1-225ENST00000494446 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
FN1-225ENST00000494446 ADAMTS12P58397 1594 aa12.77□□□□□ -0.37
FN1-225ENST00000494446 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
FN1-225ENST00000494446 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
FN1-225ENST00000494446 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
FN1-225ENST00000494446 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
FN1-225ENST00000494446 ADGRL1O94910 1474 aa12.71□□□□□ -0.38
FN1-225ENST00000494446 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
FN1-225ENST00000494446 MSH5O43196 834 aa12.68□□□□□ -0.38
FN1-225ENST00000494446 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
FN1-225ENST00000494446 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
FN1-225ENST00000494446 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
FN1-225ENST00000494446 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
FN1-225ENST00000494446 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
FN1-225ENST00000494446 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
FN1-225ENST00000494446 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
FN1-225ENST00000494446 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
FN1-225ENST00000494446 TOP2BQ02880 1626 aa12.52□□□□□ -0.4
FN1-225ENST00000494446 CUL7Q14999 1698 aa12.52□□□□□ -0.4
FN1-225ENST00000494446 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.41
FN1-225ENST00000494446 GLI2P10070 1586 aa12.51□□□□□ -0.41
FN1-225ENST00000494446 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
FN1-225ENST00000494446 ASXL2Q76L83 1435 aa12.48□□□□□ -0.41
FN1-225ENST00000494446 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
FN1-225ENST00000494446 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
FN1-225ENST00000494446 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
FN1-225ENST00000494446 PTPRGP23470 1445 aa12.46□□□□□ -0.41
FN1-225ENST00000494446 ABCC2Q92887 1545 aa12.46□□□□□ -0.42
FN1-225ENST00000494446 KIAA0586Q9BVV6 1533 aa12.45□□□□□ -0.42
FN1-225ENST00000494446 TEX14Q8IWB6 1497 aa12.43□□□□□ -0.42
FN1-225ENST00000494446 KIF21BO75037 1637 aa12.4□□□□□ -0.42
FN1-225ENST00000494446 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
FN1-225ENST00000494446 TNIKQ9UKE5 1360 aa12.38□□□□□ -0.43
FN1-225ENST00000494446 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
FN1-225ENST00000494446 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
FN1-225ENST00000494446 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
FN1-225ENST00000494446 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
FN1-225ENST00000494446 SOCS7O14512 581 aa12.34□□□□□ -0.43
FN1-225ENST00000494446 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
FN1-225ENST00000494446 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
FN1-225ENST00000494446 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
FN1-225ENST00000494446 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
FN1-225ENST00000494446 CFAP43Q8NDM7 1665 aa12.3□□□□□ -0.44
FN1-225ENST00000494446 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
FN1-225ENST00000494446 IGF1RP08069 1367 aa12.3□□□□□ -0.44
FN1-225ENST00000494446 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
FN1-225ENST00000494446 PTPRMP28827 1452 aa12.29□□□□□ -0.44
FN1-225ENST00000494446 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.44
FN1-225ENST00000494446 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.45
FN1-225ENST00000494446 CD109Q6YHK3 1445 aa12.26□□□□□ -0.45
FN1-225ENST00000494446 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
FN1-225ENST00000494446 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
FN1-225ENST00000494446 DISP1Q96F81 1524 aa12.25□□□□□ -0.45
FN1-225ENST00000494446 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
FN1-225ENST00000494446 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
FN1-225ENST00000494446 CERKQ8TCT0 537 aa12.23□□□□□ -0.45
FN1-225ENST00000494446 BCORL1Q5H9F3 1711 aa12.23□□□□□ -0.45
FN1-225ENST00000494446 MADDQ8WXG6 1647 aa12.22□□□□□ -0.45
FN1-225ENST00000494446 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
FN1-225ENST00000494446 RIMS1Q86UR5 1692 aaKnown RBP12.21□□□□□ -0.45
FN1-225ENST00000494446 HSPA2P54652 639 aa12.19□□□□□ -0.46
FN1-225ENST00000494446 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
FN1-225ENST00000494446 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
FN1-225ENST00000494446 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
FN1-225ENST00000494446 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
FN1-225ENST00000494446 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
FN1-225ENST00000494446 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
FN1-225ENST00000494446 RAPGEF3O95398 923 aa12.12□□□□□ -0.47
FN1-225ENST00000494446 ABCA8O94911 1581 aa12.09□□□□□ -0.47
FN1-225ENST00000494446 CTTNBP2Q8WZ74 1663 aa12.09□□□□□ -0.47
FN1-225ENST00000494446 PPP6R1Q9UPN7 881 aa12.08□□□□□ -0.48
FN1-225ENST00000494446 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
FN1-225ENST00000494446 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
FN1-225ENST00000494446 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
FN1-225ENST00000494446 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
FN1-225ENST00000494446 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
FN1-225ENST00000494446 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
FN1-225ENST00000494446 ADRA2BP18089 450 aa12.04□□□□□ -0.48
FN1-225ENST00000494446 ARHGEF40Q8TER5 1519 aa12.04□□□□□ -0.48
FN1-225ENST00000494446 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
FN1-225ENST00000494446 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
FN1-225ENST00000494446 RICTORQ6R327 1708 aa12.03□□□□□ -0.48
FN1-225ENST00000494446 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
FN1-225ENST00000494446 NEO1Q92859 1461 aa12.02□□□□□ -0.48
FN1-225ENST00000494446 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
FN1-225ENST00000494446 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
FN1-225ENST00000494446 FANCAO15360 1455 aa12□□□□□ -0.49
FN1-225ENST00000494446 MLECQ14165 292 aa11.99□□□□□ -0.49
FN1-225ENST00000494446 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
FN1-225ENST00000494446 ATP10BO94823 1461 aa11.99□□□□□ -0.49
FN1-225ENST00000494446 TTC37Q6PGP7 1564 aa11.97□□□□□ -0.49
FN1-225ENST00000494446 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
FN1-225ENST00000494446 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
FN1-225ENST00000494446 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.49
FN1-225ENST00000494446 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
FN1-225ENST00000494446 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
FN1-225ENST00000494446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
FN1-225ENST00000494446 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms