RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PLPPR3Q6T4P5 718 aa10.3□□□□□ -0.76
BRCA1-221ENST00000493795 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
BRCA1-221ENST00000493795 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
BRCA1-221ENST00000493795 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
BRCA1-221ENST00000493795 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-221ENST00000493795 P3H3Q8IVL6 736 aa10.26□□□□□ -0.77
BRCA1-221ENST00000493795 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-221ENST00000493795 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
BRCA1-221ENST00000493795 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
BRCA1-221ENST00000493795 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
BRCA1-221ENST00000493795 CLSTN1O94985 981 aa10.21□□□□□ -0.77
BRCA1-221ENST00000493795 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.78
BRCA1-221ENST00000493795 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
BRCA1-221ENST00000493795 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
BRCA1-221ENST00000493795 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
BRCA1-221ENST00000493795 FGD1P98174 961 aa10.19□□□□□ -0.78
BRCA1-221ENST00000493795 FTSJ3Q8IY81 847 aaKnown RBP10.19□□□□□ -0.78
BRCA1-221ENST00000493795 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
BRCA1-221ENST00000493795 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
BRCA1-221ENST00000493795 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-221ENST00000493795 KIAA2012Q0VF49 1180 aa10.18□□□□□ -0.78
BRCA1-221ENST00000493795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■■■□□ 18.6
BRCA1-221ENST00000493795 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-221ENST00000493795 DRC7Q8IY82 874 aa10.17□□□□□ -0.78
BRCA1-221ENST00000493795 CFAP53Q96M91 514 aa10.17□□□□□ -0.78
BRCA1-221ENST00000493795 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
BRCA1-221ENST00000493795 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
BRCA1-221ENST00000493795 NAP1L2Q9ULW6 460 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-221ENST00000493795 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.78
BRCA1-221ENST00000493795 CHMP4BQ9H444 224 aaKnown RBP10.15□□□□□ -0.79
BRCA1-221ENST00000493795 KCNJ4P48050 445 aa10.14□□□□□ -0.79
BRCA1-221ENST00000493795 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-221ENST00000493795 NOP58Q9Y2X3 529 aaKnown RBP10.14□□□□□ -0.79
BRCA1-221ENST00000493795 NPHP1O15259 732 aa10.13□□□□□ -0.79
BRCA1-221ENST00000493795 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
BRCA1-221ENST00000493795 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-221ENST00000493795 PRM3Q9NNZ6 103 aa10.12□□□□□ -0.79
BRCA1-221ENST00000493795 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
BRCA1-221ENST00000493795 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
BRCA1-221ENST00000493795 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-221ENST00000493795 GOLGA6L1Q8N7Z2 621 aa10.1□□□□□ -0.79
BRCA1-221ENST00000493795 A0A0U1RQG5 324 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-221ENST00000493795 MCCP23508 829 aa10.09□□□□□ -0.79
BRCA1-221ENST00000493795 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
BRCA1-221ENST00000493795 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
BRCA1-221ENST00000493795 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
BRCA1-221ENST00000493795 MS4A1P11836 297 aa10.09□□□□□ -0.79
BRCA1-221ENST00000493795 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
BRCA1-221ENST00000493795 RGS3P49796 1198 aa10.08□□□□□ -0.8
BRCA1-221ENST00000493795 TSPY4P0CV99 314 aa10.08□□□□□ -0.8
BRCA1-221ENST00000493795 TSPY10P0CW01 314 aa10.08□□□□□ -0.8
BRCA1-221ENST00000493795 USP35Q9P2H5 1018 aa10.08□□□□□ -0.8
BRCA1-221ENST00000493795 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
BRCA1-221ENST00000493795 PTMSP20962 102 aa10.07□□□□□ -0.8
BRCA1-221ENST00000493795 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
BRCA1-221ENST00000493795 CDCA8Q53HL2 280 aa10.06□□□□□ -0.8
BRCA1-221ENST00000493795 ARID4BQ4LE39 1312 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-221ENST00000493795 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
BRCA1-221ENST00000493795 SETQ01105 290 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-221ENST00000493795 KNSTRNQ9Y448 316 aa10.05□□□□□ -0.8
BRCA1-221ENST00000493795 MIER1Q8N108 512 aa10.05□□□□□ -0.8
BRCA1-221ENST00000493795 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
BRCA1-221ENST00000493795 NUDCQ9Y266 331 aa10.04□□□□□ -0.8
BRCA1-221ENST00000493795 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
BRCA1-221ENST00000493795 TPM4P67936 248 aa10.04□□□□□ -0.8
BRCA1-221ENST00000493795 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCA1-221ENST00000493795 FRAT1Q92837 279 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-221ENST00000493795 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
BRCA1-221ENST00000493795 SUPT16HQ9Y5B9 1047 aaKnown RBP10.02□□□□□ -0.81
BRCA1-221ENST00000493795 ARID3AQ99856 593 aa10.01□□□□□ -0.81
BRCA1-221ENST00000493795 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
BRCA1-221ENST00000493795 NEUROD2Q15784 382 aa10□□□□□ -0.81
BRCA1-221ENST00000493795 GBP4Q96PP9 640 aa10□□□□□ -0.81
BRCA1-221ENST00000493795 SYAP1Q96A49 352 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-221ENST00000493795 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-221ENST00000493795 SENP3Q9H4L4 574 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-221ENST00000493795 CCDC34Q96HJ3 373 aa9.97□□□□□ -0.81
BRCA1-221ENST00000493795 PDE4CQ08493 712 aa9.97□□□□□ -0.81
BRCA1-221ENST00000493795 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
BRCA1-221ENST00000493795 CEP89Q96ST8 783 aa9.97□□□□□ -0.81
BRCA1-221ENST00000493795 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
BRCA1-221ENST00000493795 TPM3P06753 285 aa9.95□□□□□ -0.82
BRCA1-221ENST00000493795 MTUS2Q5JR59 1369 aa9.94□□□□□ -0.82
BRCA1-221ENST00000493795 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
BRCA1-221ENST00000493795 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
BRCA1-221ENST00000493795 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
BRCA1-221ENST00000493795 HSP90B1P14625 803 aaKnown RBP9.92□□□□□ -0.82
BRCA1-221ENST00000493795 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
BRCA1-221ENST00000493795 GOLGA6L3A6NEY3 463 aa9.91□□□□□ -0.82
BRCA1-221ENST00000493795 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
BRCA1-221ENST00000493795 POGKQ9P215 609 aa9.91□□□□□ -0.82
BRCA1-221ENST00000493795 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
BRCA1-221ENST00000493795 RASSF8Q8NHQ8 419 aa9.89□□□□□ -0.83
BRCA1-221ENST00000493795 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-221ENST00000493795 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-221ENST00000493795 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
BRCA1-221ENST00000493795 PATL2C9JE40 543 aaKnown RBP9.89□□□□□ -0.83
BRCA1-221ENST00000493795 B4GALNT3Q6L9W6 998 aa9.88□□□□□ -0.83
BRCA1-221ENST00000493795 GPS2Q13227 327 aa9.88□□□□□ -0.83
BRCA1-221ENST00000493795 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms