RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 BIVM-ERCC5R4GMW8 1640 aa30.21■■■□□ 2.43
NECAB3-214ENST00000493590 TOP2BQ02880 1626 aa30.2■■■□□ 2.43
NECAB3-214ENST00000493590 DIP2BQ9P265 1576 aa30.19■■■□□ 2.42
NECAB3-214ENST00000493590 KDM6BO15054 1643 aa30.18■■■□□ 2.42
NECAB3-214ENST00000493590 KDM4FA0A1W2PPD8 638 aa30.17■■■□□ 2.42
NECAB3-214ENST00000493590 MAPKBP1O60336 1514 aa30.16■■■□□ 2.42
NECAB3-214ENST00000493590 TSPOAP1O95153 1857 aa30.12■■■□□ 2.41
NECAB3-214ENST00000493590 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
NECAB3-214ENST00000493590 ADCY10Q96PN6 1610 aa30.11■■■□□ 2.41
NECAB3-214ENST00000493590 ILDR1Q86SU0 546 aaPredicted RBP30.1■■■□□ 2.41
NECAB3-214ENST00000493590 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
NECAB3-214ENST00000493590 TTBK1Q5TCY1 1321 aaPredicted RBP29.86■■■□□ 2.37
NECAB3-214ENST00000493590 KIAA0586Q9BVV6 1533 aa29.83■■■□□ 2.37
NECAB3-214ENST00000493590 ADGRL1O94910 1474 aa29.79■■■□□ 2.36
NECAB3-214ENST00000493590 PTPRGP23470 1445 aa29.75■■■□□ 2.35
NECAB3-214ENST00000493590 PPRC1Q5VV67 1664 aaKnown RBP29.72■■■□□ 2.35
NECAB3-214ENST00000493590 ASXL2Q76L83 1435 aa29.69■■■□□ 2.34
NECAB3-214ENST00000493590 CUL7Q14999 1698 aa29.69■■■□□ 2.34
NECAB3-214ENST00000493590 ABCC2Q92887 1545 aa29.68■■■□□ 2.34
NECAB3-214ENST00000493590 IGF1RP08069 1367 aa29.65■■■□□ 2.34
NECAB3-214ENST00000493590 HECW2Q9P2P5 1572 aa29.65■■■□□ 2.34
NECAB3-214ENST00000493590 GLI2P10070 1586 aa29.64■■■□□ 2.33
NECAB3-214ENST00000493590 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
NECAB3-214ENST00000493590 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
NECAB3-214ENST00000493590 CARMIL2Q6F5E8 1435 aa29.6■■■□□ 2.33
NECAB3-214ENST00000493590 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
NECAB3-214ENST00000493590 COL17A1Q9UMD9 1497 aaPredicted RBP29.56■■■□□ 2.32
NECAB3-214ENST00000493590 MAP3K4Q9Y6R4 1608 aa29.5■■■□□ 2.31
NECAB3-214ENST00000493590 UHRF1BP1LA0JNW5 1464 aa29.49■■■□□ 2.31
NECAB3-214ENST00000493590 EPRSP07814 1512 aaKnown RBP29.49■■■□□ 2.31
NECAB3-214ENST00000493590 IQGAP2Q13576 1575 aa29.48■■■□□ 2.31
NECAB3-214ENST00000493590 UACAQ9BZF9 1416 aa29.48■■■□□ 2.31
NECAB3-214ENST00000493590 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
NECAB3-214ENST00000493590 TEX14Q8IWB6 1497 aa29.47■■■□□ 2.31
NECAB3-214ENST00000493590 ZCCHC11Q5TAX3 1644 aaKnown RBP29.41■■■□□ 2.3
NECAB3-214ENST00000493590 KDM5BQ9UGL1 1544 aa29.38■■■□□ 2.29
NECAB3-214ENST00000493590 DISP1Q96F81 1524 aa29.37■■■□□ 2.29
NECAB3-214ENST00000493590 WDR7Q9Y4E6 1490 aa29.25■■■□□ 2.27
NECAB3-214ENST00000493590 KIAA0556O60303 1618 aa29.23■■■□□ 2.27
NECAB3-214ENST00000493590 UGGT2Q9NYU1 1516 aa29.21■■■□□ 2.27
NECAB3-214ENST00000493590 KIF21BO75037 1637 aa29.2■■■□□ 2.27
NECAB3-214ENST00000493590 FBXO41Q8TF61 875 aa29.2■■■□□ 2.26
NECAB3-214ENST00000493590 CD109Q6YHK3 1445 aa29.17■■■□□ 2.26
NECAB3-214ENST00000493590 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
NECAB3-214ENST00000493590 CFAP43Q8NDM7 1665 aa29.15■■■□□ 2.26
NECAB3-214ENST00000493590 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
NECAB3-214ENST00000493590 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
NECAB3-214ENST00000493590 CTTNBP2Q8WZ74 1663 aa28.99■■■□□ 2.23
NECAB3-214ENST00000493590 ABCA8O94911 1581 aa28.98■■■□□ 2.23
NECAB3-214ENST00000493590 PTPRMP28827 1452 aa28.96■■■□□ 2.23
NECAB3-214ENST00000493590 GOLGA3Q08378 1498 aa28.93■■■□□ 2.22
NECAB3-214ENST00000493590 ARID3CA6NKF2 412 aa28.93■■■□□ 2.22
NECAB3-214ENST00000493590 ARAP3Q8WWN8 1544 aa28.93■■■□□ 2.22
NECAB3-214ENST00000493590 ADAMTSL3P82987 1691 aa28.92■■■□□ 2.22
NECAB3-214ENST00000493590 PCF11O94913 1555 aaKnown RBP28.83■■■□□ 2.21
NECAB3-214ENST00000493590 RAPGEF3O95398 923 aa28.82■■■□□ 2.2
NECAB3-214ENST00000493590 ARID4BQ4LE39 1312 aaPredicted RBP28.82■■■□□ 2.2
NECAB3-214ENST00000493590 MADDQ8WXG6 1647 aa28.81■■■□□ 2.2
NECAB3-214ENST00000493590 BCORL1Q5H9F3 1711 aa28.8■■■□□ 2.2
NECAB3-214ENST00000493590 LMTK3Q96Q04 1460 aa28.78■■■□□ 2.2
NECAB3-214ENST00000493590 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.2
NECAB3-214ENST00000493590 ATP10BO94823 1461 aa28.74■■■□□ 2.19
NECAB3-214ENST00000493590 PHLDB1Q86UU1 1377 aa28.74■■■□□ 2.19
NECAB3-214ENST00000493590 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
NECAB3-214ENST00000493590 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
NECAB3-214ENST00000493590 RIMS1Q86UR5 1692 aaKnown RBP28.72■■■□□ 2.19
NECAB3-214ENST00000493590 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.18
NECAB3-214ENST00000493590 FRMPD1Q5SYB0 1578 aa28.7■■■□□ 2.18
NECAB3-214ENST00000493590 NEO1Q92859 1461 aa28.67■■■□□ 2.18
NECAB3-214ENST00000493590 HSPA2P54652 639 aa28.67■■■□□ 2.18
NECAB3-214ENST00000493590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.18
NECAB3-214ENST00000493590 HNRNPUL2Q1KMD3 747 aaKnown RBP28.64■■■□□ 2.18
NECAB3-214ENST00000493590 ARHGEF40Q8TER5 1519 aa28.6■■■□□ 2.17
NECAB3-214ENST00000493590 PRXQ9BXM0 1461 aa28.58■■■□□ 2.17
NECAB3-214ENST00000493590 RAPGEF6Q8TEU7 1601 aa28.57■■■□□ 2.16
NECAB3-214ENST00000493590 CERKQ8TCT0 537 aa28.55■■■□□ 2.16
NECAB3-214ENST00000493590 RICTORQ6R327 1708 aa28.52■■■□□ 2.16
NECAB3-214ENST00000493590 DENND4BO75064 1496 aaPredicted RBP28.51■■■□□ 2.15
NECAB3-214ENST00000493590 FANCAO15360 1455 aa28.47■■■□□ 2.15
NECAB3-214ENST00000493590 POGZQ7Z3K3 1410 aa28.47■■■□□ 2.15
NECAB3-214ENST00000493590 SAMD9Q5K651 1589 aa28.46■■■□□ 2.15
NECAB3-214ENST00000493590 MLECQ14165 292 aa28.45■■■□□ 2.14
NECAB3-214ENST00000493590 DISP3Q9P2K9 1392 aa28.45■■■□□ 2.14
NECAB3-214ENST00000493590 AKNAQ7Z591 1439 aa28.44■■■□□ 2.14
NECAB3-214ENST00000493590 SIGLEC1Q9BZZ2 1709 aa28.44■■■□□ 2.14
NECAB3-214ENST00000493590 NUP153P49790 1475 aaKnown RBP28.42■■■□□ 2.14
NECAB3-214ENST00000493590 ZFYVE16Q7Z3T8 1539 aa28.42■■■□□ 2.14
NECAB3-214ENST00000493590 CFAP74Q9C0B2 1584 aa28.41■■■□□ 2.14
NECAB3-214ENST00000493590 ILDR2Q71H61 639 aa28.41■■■□□ 2.14
NECAB3-214ENST00000493590 FER1L4A9Z1Z3 1794 aa28.41■■■□□ 2.14
NECAB3-214ENST00000493590 FHOD3Q2V2M9 1422 aa28.41■■■□□ 2.14
NECAB3-214ENST00000493590 RANGAP1P46060 587 aaPredicted RBP28.4■■■□□ 2.14
NECAB3-214ENST00000493590 YEATS2Q9ULM3 1422 aa28.39■■■□□ 2.14
NECAB3-214ENST00000493590 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
NECAB3-214ENST00000493590 ZMYM4Q5VZL5 1548 aa28.37■■■□□ 2.13
NECAB3-214ENST00000493590 PLEKHD1A6NEE1 506 aa28.35■■■□□ 2.13
NECAB3-214ENST00000493590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.33■■■□□ 2.132e-6■■■□□ 19
NECAB3-214ENST00000493590 TTC37Q6PGP7 1564 aa28.33■■■□□ 2.13
NECAB3-214ENST00000493590 SOCS7O14512 581 aa28.32■■■□□ 2.12
NECAB3-214ENST00000493590 HECW1Q76N89 1606 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms