RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
NUP50-218ENST00000493456 ABCC10Q5T3U5 1492 aa31.47■■■□□ 2.63
NUP50-218ENST00000493456 MAPKBP1O60336 1514 aa31.47■■■□□ 2.63
NUP50-218ENST00000493456 NPM1P06748 294 aaKnown RBP eCLIP31.44■■■□□ 2.62
NUP50-218ENST00000493456 FAM69CQ0P6D2 419 aa31.41■■■□□ 2.62
NUP50-218ENST00000493456 ADCY10Q96PN6 1610 aa31.39■■■□□ 2.62
NUP50-218ENST00000493456 KIAA0586Q9BVV6 1533 aa31.38■■■□□ 2.61
NUP50-218ENST00000493456 DIP2BQ9P265 1576 aa31.38■■■□□ 2.61
NUP50-218ENST00000493456 CUL7Q14999 1698 aa31.33■■■□□ 2.61
NUP50-218ENST00000493456 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
NUP50-218ENST00000493456 IGF1RP08069 1367 aa31.3■■■□□ 2.6
NUP50-218ENST00000493456 KDM6BO15054 1643 aa31.22■■■□□ 2.59
NUP50-218ENST00000493456 PTPRGP23470 1445 aa31.14■■■□□ 2.58
NUP50-218ENST00000493456 TSPOAP1O95153 1857 aa31.1■■■□□ 2.57
NUP50-218ENST00000493456 CARMIL2Q6F5E8 1435 aa31.09■■■□□ 2.57
NUP50-218ENST00000493456 CARMIL1Q5VZK9 1371 aa31.09■■■□□ 2.57
NUP50-218ENST00000493456 TNIKQ9UKE5 1360 aa31.06■■■□□ 2.56
NUP50-218ENST00000493456 ABCC2Q92887 1545 aa31.06■■■□□ 2.56
NUP50-218ENST00000493456 IQGAP2Q13576 1575 aa31.02■■■□□ 2.56
NUP50-218ENST00000493456 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
NUP50-218ENST00000493456 PLB1Q6P1J6 1458 aa30.99■■■□□ 2.55
NUP50-218ENST00000493456 GLI2P10070 1586 aa30.97■■■□□ 2.55
NUP50-218ENST00000493456 UHRF1BP1LA0JNW5 1464 aa30.97■■■□□ 2.55
NUP50-218ENST00000493456 ASXL2Q76L83 1435 aa30.97■■■□□ 2.55
NUP50-218ENST00000493456 TTBK1Q5TCY1 1321 aaPredicted RBP30.96■■■□□ 2.55
NUP50-218ENST00000493456 UACAQ9BZF9 1416 aa30.9■■■□□ 2.54
NUP50-218ENST00000493456 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
NUP50-218ENST00000493456 DISP1Q96F81 1524 aa30.88■■■□□ 2.53
NUP50-218ENST00000493456 KDM5BQ9UGL1 1544 aa30.82■■■□□ 2.52
NUP50-218ENST00000493456 UGGT2Q9NYU1 1516 aa30.81■■■□□ 2.52
NUP50-218ENST00000493456 EPRSP07814 1512 aaKnown RBP30.79■■■□□ 2.52
NUP50-218ENST00000493456 RAPGEF2Q9Y4G8 1499 aa30.79■■■□□ 2.52
NUP50-218ENST00000493456 MAP3K4Q9Y6R4 1608 aa30.77■■■□□ 2.52
NUP50-218ENST00000493456 TEX14Q8IWB6 1497 aa30.76■■■□□ 2.51
NUP50-218ENST00000493456 KIAA0556O60303 1618 aa30.74■■■□□ 2.51
NUP50-218ENST00000493456 ZCCHC11Q5TAX3 1644 aaKnown RBP30.73■■■□□ 2.51
NUP50-218ENST00000493456 ADGRL1O94910 1474 aa30.72■■■□□ 2.51
NUP50-218ENST00000493456 COL17A1Q9UMD9 1497 aaPredicted RBP30.69■■■□□ 2.5
NUP50-218ENST00000493456 WDR7Q9Y4E6 1490 aa30.63■■■□□ 2.49
NUP50-218ENST00000493456 CTTNBP2Q8WZ74 1663 aa30.56■■■□□ 2.48
NUP50-218ENST00000493456 GOLGA3Q08378 1498 aa30.54■■■□□ 2.48
NUP50-218ENST00000493456 MAGI3Q5TCQ9 1506 aa30.49■■■□□ 2.47
NUP50-218ENST00000493456 CFAP43Q8NDM7 1665 aa30.49■■■□□ 2.47
NUP50-218ENST00000493456 ABCA8O94911 1581 aa30.48■■■□□ 2.47
NUP50-218ENST00000493456 ILDR1Q86SU0 546 aaPredicted RBP30.47■■■□□ 2.47
NUP50-218ENST00000493456 CD109Q6YHK3 1445 aa30.47■■■□□ 2.47
NUP50-218ENST00000493456 HECW2Q9P2P5 1572 aa30.44■■■□□ 2.46
NUP50-218ENST00000493456 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
NUP50-218ENST00000493456 KCNH8Q96L42 1107 aa30.36■■■□□ 2.45
NUP50-218ENST00000493456 ARAP3Q8WWN8 1544 aa30.27■■■□□ 2.44
NUP50-218ENST00000493456 FAM9AQ8IZU1 332 aaPredicted RBP30.26■■■□□ 2.43
NUP50-218ENST00000493456 KIF21BO75037 1637 aa30.23■■■□□ 2.43
NUP50-218ENST00000493456 ATP10BO94823 1461 aa30.19■■■□□ 2.42
NUP50-218ENST00000493456 PHLDB1Q86UU1 1377 aa30.18■■■□□ 2.42
NUP50-218ENST00000493456 ABCA9Q8IUA7 1624 aa30.18■■■□□ 2.42
NUP50-218ENST00000493456 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
NUP50-218ENST00000493456 SAMD9Q5K651 1589 aa30.11■■■□□ 2.41
NUP50-218ENST00000493456 P3H3Q8IVL6 736 aa30.1■■■□□ 2.41
NUP50-218ENST00000493456 NEO1Q92859 1461 aa30.08■■■□□ 2.41
NUP50-218ENST00000493456 RAPGEF6Q8TEU7 1601 aa30.07■■■□□ 2.4
NUP50-218ENST00000493456 ADAMTSL3P82987 1691 aa30.04■■■□□ 2.4
NUP50-218ENST00000493456 PTPRMP28827 1452 aa30.01■■■□□ 2.4
NUP50-218ENST00000493456 RAPGEF3O95398 923 aa29.98■■■□□ 2.39
NUP50-218ENST00000493456 CSRNP3Q8WYN3 585 aa29.97■■■□□ 2.39
NUP50-218ENST00000493456 FRMPD1Q5SYB0 1578 aa29.96■■■□□ 2.39
NUP50-218ENST00000493456 NUP153P49790 1475 aaKnown RBP29.95■■■□□ 2.39
NUP50-218ENST00000493456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.95■■■□□ 2.39
NUP50-218ENST00000493456 HNRNPUL2Q1KMD3 747 aaKnown RBP29.95■■■□□ 2.39
NUP50-218ENST00000493456 BCORL1Q5H9F3 1711 aa29.93■■■□□ 2.38
NUP50-218ENST00000493456 ARHGEF40Q8TER5 1519 aa29.87■■■□□ 2.37
NUP50-218ENST00000493456 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
NUP50-218ENST00000493456 FBXO41Q8TF61 875 aa29.87■■■□□ 2.37
NUP50-218ENST00000493456 EEA1Q15075 1411 aa29.87■■■□□ 2.37
NUP50-218ENST00000493456 ARID4BQ4LE39 1312 aaPredicted RBP29.85■■■□□ 2.37
NUP50-218ENST00000493456 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
NUP50-218ENST00000493456 DENND4BO75064 1496 aaPredicted RBP29.84■■■□□ 2.37
NUP50-218ENST00000493456 PCF11O94913 1555 aaKnown RBP29.84■■■□□ 2.37
NUP50-218ENST00000493456 CFAP74Q9C0B2 1584 aa29.84■■■□□ 2.37
NUP50-218ENST00000493456 PLEKHD1A6NEE1 506 aa29.81■■■□□ 2.36
NUP50-218ENST00000493456 RICTORQ6R327 1708 aa29.81■■■□□ 2.36
NUP50-218ENST00000493456 FANCAO15360 1455 aa29.79■■■□□ 2.36
NUP50-218ENST00000493456 AKNAQ7Z591 1439 aa29.79■■■□□ 2.36
NUP50-218ENST00000493456 LMTK3Q96Q04 1460 aa29.77■■■□□ 2.36
NUP50-218ENST00000493456 EFCAB5A4FU69 1503 aa29.76■■■□□ 2.36
NUP50-218ENST00000493456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.76■■■□□ 2.35
NUP50-218ENST00000493456 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
NUP50-218ENST00000493456 ZMYM4Q5VZL5 1548 aa29.75■■■□□ 2.35
NUP50-218ENST00000493456 RIMS1Q86UR5 1692 aaKnown RBP29.74■■■□□ 2.35
NUP50-218ENST00000493456 POGZQ7Z3K3 1410 aa29.71■■■□□ 2.35
NUP50-218ENST00000493456 TTC37Q6PGP7 1564 aa29.71■■■□□ 2.35
NUP50-218ENST00000493456 ZFYVE16Q7Z3T8 1539 aa29.68■■■□□ 2.34
NUP50-218ENST00000493456 MAGI2Q86UL8 1455 aa29.68■■■□□ 2.34
NUP50-218ENST00000493456 YEATS2Q9ULM3 1422 aa29.62■■■□□ 2.33
NUP50-218ENST00000493456 CDK13Q14004 1512 aaKnown RBP29.59■■■□□ 2.33
NUP50-218ENST00000493456 HECW1Q76N89 1606 aa29.59■■■□□ 2.33
NUP50-218ENST00000493456 SIGLEC1Q9BZZ2 1709 aa29.59■■■□□ 2.33
NUP50-218ENST00000493456 PLCH2O75038 1416 aa29.57■■■□□ 2.32
NUP50-218ENST00000493456 SCAPERQ9BY12 1400 aa29.54■■■□□ 2.32
NUP50-218ENST00000493456 FER1L4A9Z1Z3 1794 aa29.53■■■□□ 2.32
NUP50-218ENST00000493456 HSPA2P54652 639 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms