RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 KDM4FA0A1W2PPD8 638 aa21.92■■□□□ 1.1
GPNMB-214ENST00000492858 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
GPNMB-214ENST00000492858 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
GPNMB-214ENST00000492858 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
GPNMB-214ENST00000492858 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
GPNMB-214ENST00000492858 KDM6BO15054 1643 aa21.84■■□□□ 1.09
GPNMB-214ENST00000492858 ILDR1Q86SU0 546 aaPredicted RBP21.84■■□□□ 1.09
GPNMB-214ENST00000492858 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
GPNMB-214ENST00000492858 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
GPNMB-214ENST00000492858 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
GPNMB-214ENST00000492858 TSPOAP1O95153 1857 aa21.73■■□□□ 1.07
GPNMB-214ENST00000492858 KIAA0586Q9BVV6 1533 aa21.67■■□□□ 1.06
GPNMB-214ENST00000492858 PTPRGP23470 1445 aa21.61■■□□□ 1.05
GPNMB-214ENST00000492858 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
GPNMB-214ENST00000492858 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
GPNMB-214ENST00000492858 IGF1RP08069 1367 aa21.57■■□□□ 1.04
GPNMB-214ENST00000492858 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
GPNMB-214ENST00000492858 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
GPNMB-214ENST00000492858 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
GPNMB-214ENST00000492858 PPRC1Q5VV67 1664 aaKnown RBP21.51■■□□□ 1.03
GPNMB-214ENST00000492858 GLI2P10070 1586 aa21.51■■□□□ 1.03
GPNMB-214ENST00000492858 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
GPNMB-214ENST00000492858 CUL7Q14999 1698 aa21.5■■□□□ 1.03
GPNMB-214ENST00000492858 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
GPNMB-214ENST00000492858 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
GPNMB-214ENST00000492858 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
GPNMB-214ENST00000492858 COL17A1Q9UMD9 1497 aaPredicted RBP21.47■■□□□ 1.03
GPNMB-214ENST00000492858 UHRF1BP1LA0JNW5 1464 aa21.43■■□□□ 1.02
GPNMB-214ENST00000492858 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
GPNMB-214ENST00000492858 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
GPNMB-214ENST00000492858 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.02
GPNMB-214ENST00000492858 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
GPNMB-214ENST00000492858 IQGAP2Q13576 1575 aa21.37■■□□□ 1.01
GPNMB-214ENST00000492858 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
GPNMB-214ENST00000492858 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
GPNMB-214ENST00000492858 DISP1Q96F81 1524 aa21.33■■□□□ 1
GPNMB-214ENST00000492858 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
GPNMB-214ENST00000492858 WDR7Q9Y4E6 1490 aa21.24■□□□□ 0.99
GPNMB-214ENST00000492858 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
GPNMB-214ENST00000492858 FBXO41Q8TF61 875 aa21.21■□□□□ 0.99
GPNMB-214ENST00000492858 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
GPNMB-214ENST00000492858 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
GPNMB-214ENST00000492858 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
GPNMB-214ENST00000492858 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
GPNMB-214ENST00000492858 RAPGEF2Q9Y4G8 1499 aa21.13■□□□□ 0.97
GPNMB-214ENST00000492858 KIF21BO75037 1637 aa21.11■□□□□ 0.97
GPNMB-214ENST00000492858 CFAP43Q8NDM7 1665 aa21.1■□□□□ 0.97
GPNMB-214ENST00000492858 ABCA8O94911 1581 aa21.02■□□□□ 0.96
GPNMB-214ENST00000492858 PTPRMP28827 1452 aa21.01■□□□□ 0.95
GPNMB-214ENST00000492858 ARAP3Q8WWN8 1544 aa21.01■□□□□ 0.95
GPNMB-214ENST00000492858 GOLGA3Q08378 1498 aa21■□□□□ 0.95
GPNMB-214ENST00000492858 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
GPNMB-214ENST00000492858 ARID3CA6NKF2 412 aa20.95■□□□□ 0.94
GPNMB-214ENST00000492858 RAPGEF3O95398 923 aa20.93■□□□□ 0.94
GPNMB-214ENST00000492858 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
GPNMB-214ENST00000492858 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
GPNMB-214ENST00000492858 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
GPNMB-214ENST00000492858 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
GPNMB-214ENST00000492858 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
GPNMB-214ENST00000492858 ATP10BO94823 1461 aa20.88■□□□□ 0.93
GPNMB-214ENST00000492858 MADDQ8WXG6 1647 aa20.86■□□□□ 0.93
GPNMB-214ENST00000492858 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
GPNMB-214ENST00000492858 ABCA9Q8IUA7 1624 aa20.85■□□□□ 0.93
GPNMB-214ENST00000492858 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
GPNMB-214ENST00000492858 NEO1Q92859 1461 aa20.83■□□□□ 0.93
GPNMB-214ENST00000492858 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
GPNMB-214ENST00000492858 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
GPNMB-214ENST00000492858 HSPA2P54652 639 aa20.79■□□□□ 0.92
GPNMB-214ENST00000492858 PRXQ9BXM0 1461 aa20.77■□□□□ 0.92
GPNMB-214ENST00000492858 RIMS1Q86UR5 1692 aaKnown RBP20.75■□□□□ 0.91
GPNMB-214ENST00000492858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
GPNMB-214ENST00000492858 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
GPNMB-214ENST00000492858 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
GPNMB-214ENST00000492858 ARHGEF40Q8TER5 1519 aa20.74■□□□□ 0.91
GPNMB-214ENST00000492858 CERKQ8TCT0 537 aa20.73■□□□□ 0.91
GPNMB-214ENST00000492858 DENND4BO75064 1496 aaPredicted RBP20.7■□□□□ 0.9
GPNMB-214ENST00000492858 RAPGEF6Q8TEU7 1601 aa20.68■□□□□ 0.9
GPNMB-214ENST00000492858 POGZQ7Z3K3 1410 aa20.67■□□□□ 0.9
GPNMB-214ENST00000492858 FANCAO15360 1455 aa20.65■□□□□ 0.9
GPNMB-214ENST00000492858 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
GPNMB-214ENST00000492858 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
GPNMB-214ENST00000492858 RICTORQ6R327 1708 aa20.64■□□□□ 0.89
GPNMB-214ENST00000492858 NUP153P49790 1475 aaKnown RBP20.63■□□□□ 0.89
GPNMB-214ENST00000492858 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
GPNMB-214ENST00000492858 DISP3Q9P2K9 1392 aa20.62■□□□□ 0.89
GPNMB-214ENST00000492858 MLECQ14165 292 aa20.62■□□□□ 0.89
GPNMB-214ENST00000492858 ILDR2Q71H61 639 aa20.62■□□□□ 0.89
GPNMB-214ENST00000492858 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
GPNMB-214ENST00000492858 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
GPNMB-214ENST00000492858 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
GPNMB-214ENST00000492858 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.89
GPNMB-214ENST00000492858 SOCS7O14512 581 aa20.58■□□□□ 0.89
GPNMB-214ENST00000492858 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
GPNMB-214ENST00000492858 SIGLEC1Q9BZZ2 1709 aa20.58■□□□□ 0.88
GPNMB-214ENST00000492858 EFCAB5A4FU69 1503 aa20.58■□□□□ 0.88
GPNMB-214ENST00000492858 MAGI2Q86UL8 1455 aa20.55■□□□□ 0.88
GPNMB-214ENST00000492858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
GPNMB-214ENST00000492858 RANGAP1P46060 587 aaPredicted RBP20.54■□□□□ 0.88
GPNMB-214ENST00000492858 TTC37Q6PGP7 1564 aa20.54■□□□□ 0.88
GPNMB-214ENST00000492858 FER1L4A9Z1Z3 1794 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms