RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
GAPDH-209ENST00000492719 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
GAPDH-209ENST00000492719 PRG4Q92954 1404 aaPredicted RBP24.47■■□□□ 1.51
GAPDH-209ENST00000492719 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
GAPDH-209ENST00000492719 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
GAPDH-209ENST00000492719 FBXO41Q8TF61 875 aa24.39■■□□□ 1.49
GAPDH-209ENST00000492719 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
GAPDH-209ENST00000492719 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
GAPDH-209ENST00000492719 PPRC1Q5VV67 1664 aaKnown RBP24.26■■□□□ 1.47
GAPDH-209ENST00000492719 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
GAPDH-209ENST00000492719 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
GAPDH-209ENST00000492719 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
GAPDH-209ENST00000492719 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
GAPDH-209ENST00000492719 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
GAPDH-209ENST00000492719 COL17A1Q9UMD9 1497 aaPredicted RBP24.11■■□□□ 1.45
GAPDH-209ENST00000492719 GLI2P10070 1586 aa24.04■■□□□ 1.44
GAPDH-209ENST00000492719 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
GAPDH-209ENST00000492719 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
GAPDH-209ENST00000492719 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
GAPDH-209ENST00000492719 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
GAPDH-209ENST00000492719 CUL7Q14999 1698 aa23.99■■□□□ 1.43
GAPDH-209ENST00000492719 PLB1Q6P1J6 1458 aa23.95■■□□□ 1.42
GAPDH-209ENST00000492719 MAP3K4Q9Y6R4 1608 aa23.95■■□□□ 1.42
GAPDH-209ENST00000492719 ABCC2Q92887 1545 aa23.94■■□□□ 1.42
GAPDH-209ENST00000492719 ILDR2Q71H61 639 aa23.93■■□□□ 1.42
GAPDH-209ENST00000492719 SOCS7O14512 581 aa23.92■■□□□ 1.42
GAPDH-209ENST00000492719 PTPRGP23470 1445 aa23.9■■□□□ 1.42
GAPDH-209ENST00000492719 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.42
GAPDH-209ENST00000492719 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
GAPDH-209ENST00000492719 KIF21BO75037 1637 aa23.87■■□□□ 1.41
GAPDH-209ENST00000492719 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
GAPDH-209ENST00000492719 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
GAPDH-209ENST00000492719 TNIKQ9UKE5 1360 aa23.74■■□□□ 1.39
GAPDH-209ENST00000492719 UHRF1BP1LA0JNW5 1464 aa23.72■■□□□ 1.39
GAPDH-209ENST00000492719 ZCCHC11Q5TAX3 1644 aaKnown RBP23.71■■□□□ 1.39
GAPDH-209ENST00000492719 PCF11O94913 1555 aaKnown RBP23.7■■□□□ 1.38
GAPDH-209ENST00000492719 PTPRMP28827 1452 aa23.7■■□□□ 1.38
GAPDH-209ENST00000492719 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
GAPDH-209ENST00000492719 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
GAPDH-209ENST00000492719 ADAMTSL3P82987 1691 aa23.66■■□□□ 1.38
GAPDH-209ENST00000492719 KDM5BQ9UGL1 1544 aa23.64■■□□□ 1.38
GAPDH-209ENST00000492719 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
GAPDH-209ENST00000492719 CERKQ8TCT0 537 aa23.59■■□□□ 1.37
GAPDH-209ENST00000492719 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
GAPDH-209ENST00000492719 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
GAPDH-209ENST00000492719 MADDQ8WXG6 1647 aa23.55■■□□□ 1.36
GAPDH-209ENST00000492719 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
GAPDH-209ENST00000492719 MAGI3Q5TCQ9 1506 aa23.54■■□□□ 1.36
GAPDH-209ENST00000492719 CD109Q6YHK3 1445 aa23.54■■□□□ 1.36
GAPDH-209ENST00000492719 IGF1RP08069 1367 aa23.52■■□□□ 1.36
GAPDH-209ENST00000492719 HSPA2P54652 639 aa23.51■■□□□ 1.35
GAPDH-209ENST00000492719 BCORL1Q5H9F3 1711 aa23.5■■□□□ 1.35
GAPDH-209ENST00000492719 DISP1Q96F81 1524 aa23.49■■□□□ 1.35
GAPDH-209ENST00000492719 RIMS1Q86UR5 1692 aaKnown RBP23.47■■□□□ 1.35
GAPDH-209ENST00000492719 KCNH8Q96L42 1107 aa23.44■■□□□ 1.34
GAPDH-209ENST00000492719 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
GAPDH-209ENST00000492719 ARAP3Q8WWN8 1544 aa23.39■■□□□ 1.34
GAPDH-209ENST00000492719 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.33
GAPDH-209ENST00000492719 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
GAPDH-209ENST00000492719 KIAA0556O60303 1618 aa23.37■■□□□ 1.33
GAPDH-209ENST00000492719 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
GAPDH-209ENST00000492719 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
GAPDH-209ENST00000492719 RAPGEF3O95398 923 aa23.27■■□□□ 1.32
GAPDH-209ENST00000492719 FRMPD1Q5SYB0 1578 aa23.24■■□□□ 1.31
GAPDH-209ENST00000492719 ABCA8O94911 1581 aa23.19■■□□□ 1.3
GAPDH-209ENST00000492719 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
GAPDH-209ENST00000492719 ABCA9Q8IUA7 1624 aa23.14■■□□□ 1.29
GAPDH-209ENST00000492719 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
GAPDH-209ENST00000492719 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
GAPDH-209ENST00000492719 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
GAPDH-209ENST00000492719 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
GAPDH-209ENST00000492719 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
GAPDH-209ENST00000492719 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
GAPDH-209ENST00000492719 NEO1Q92859 1461 aa23.09■■□□□ 1.29
GAPDH-209ENST00000492719 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
GAPDH-209ENST00000492719 FANCAO15360 1455 aa23.05■■□□□ 1.28
GAPDH-209ENST00000492719 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
GAPDH-209ENST00000492719 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
GAPDH-209ENST00000492719 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
GAPDH-209ENST00000492719 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
GAPDH-209ENST00000492719 MLECQ14165 292 aa23.03■■□□□ 1.28
GAPDH-209ENST00000492719 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
GAPDH-209ENST00000492719 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
GAPDH-209ENST00000492719 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
GAPDH-209ENST00000492719 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
GAPDH-209ENST00000492719 ATP10BO94823 1461 aa22.96■■□□□ 1.27
GAPDH-209ENST00000492719 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
GAPDH-209ENST00000492719 LTBP4Q8N2S1 1624 aa22.94■■□□□ 1.26
GAPDH-209ENST00000492719 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
GAPDH-209ENST00000492719 CEBPAP49715 358 aaPredicted RBP22.9■■□□□ 1.26
GAPDH-209ENST00000492719 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
GAPDH-209ENST00000492719 IQSEC2Q5JU85 1478 aa22.89■■□□□ 1.25
GAPDH-209ENST00000492719 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
GAPDH-209ENST00000492719 FHOD3Q2V2M9 1422 aa22.88■■□□□ 1.25
GAPDH-209ENST00000492719 PTPRTO14522 1441 aa22.87■■□□□ 1.25
GAPDH-209ENST00000492719 UHRF1BP1Q6BDS2 1440 aa22.86■■□□□ 1.25
GAPDH-209ENST00000492719 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
GAPDH-209ENST00000492719 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.25
GAPDH-209ENST00000492719 MED1Q15648 1581 aaPredicted RBP22.83■■□□□ 1.25
GAPDH-209ENST00000492719 CFAP74Q9C0B2 1584 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms