RNA–Protein interactions for RNA: ENST00000491847.1

CISH-203, Transcript of cytokine inducible SH2 containing protein, humanhuman

TSL 1 (best)

Gene CISH, Length 5,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-203ENST00000491847 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
CISH-203ENST00000491847 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
CISH-203ENST00000491847 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
CISH-203ENST00000491847 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
CISH-203ENST00000491847 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
CISH-203ENST00000491847 ARXQ96QS3 562 aa17.27■□□□□ 0.36
CISH-203ENST00000491847 MYO15BQ96JP2 1530 aa17.24■□□□□ 0.35
CISH-203ENST00000491847 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
CISH-203ENST00000491847 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
CISH-203ENST00000491847 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
CISH-203ENST00000491847 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
CISH-203ENST00000491847 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.34
CISH-203ENST00000491847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
CISH-203ENST00000491847 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
CISH-203ENST00000491847 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
CISH-203ENST00000491847 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
CISH-203ENST00000491847 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
CISH-203ENST00000491847 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
CISH-203ENST00000491847 KCNH8Q96L42 1107 aa17.14■□□□□ 0.33
CISH-203ENST00000491847 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
CISH-203ENST00000491847 BECN1Q14457 450 aa17.11■□□□□ 0.33
CISH-203ENST00000491847 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
CISH-203ENST00000491847 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
CISH-203ENST00000491847 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.32
CISH-203ENST00000491847 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
CISH-203ENST00000491847 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
CISH-203ENST00000491847 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
CISH-203ENST00000491847 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
CISH-203ENST00000491847 CUX2O14529 1486 aa17.04■□□□□ 0.32
CISH-203ENST00000491847 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
CISH-203ENST00000491847 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
CISH-203ENST00000491847 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
CISH-203ENST00000491847 PPP4R2Q9NY27 417 aa17.02■□□□□ 0.32
CISH-203ENST00000491847 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
CISH-203ENST00000491847 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
CISH-203ENST00000491847 GOLGA6L22H0YM25 854 aa16.99■□□□□ 0.31
CISH-203ENST00000491847 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
CISH-203ENST00000491847 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
CISH-203ENST00000491847 PPP1R15AO75807 674 aaPredicted RBP16.95■□□□□ 0.3
CISH-203ENST00000491847 LAS1LQ9Y4W2 734 aaKnown RBP16.93■□□□□ 0.3
CISH-203ENST00000491847 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
CISH-203ENST00000491847 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
CISH-203ENST00000491847 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
CISH-203ENST00000491847 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
CISH-203ENST00000491847 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
CISH-203ENST00000491847 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
CISH-203ENST00000491847 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
CISH-203ENST00000491847 SOGA1O94964 1423 aa16.9■□□□□ 0.3
CISH-203ENST00000491847 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
CISH-203ENST00000491847 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
CISH-203ENST00000491847 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
CISH-203ENST00000491847 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
CISH-203ENST00000491847 PTMAP06454 111 aaKnown RBP16.85■□□□□ 0.29
CISH-203ENST00000491847 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
CISH-203ENST00000491847 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
CISH-203ENST00000491847 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
CISH-203ENST00000491847 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
CISH-203ENST00000491847 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
CISH-203ENST00000491847 RGS3P49796 1198 aa16.83■□□□□ 0.28
CISH-203ENST00000491847 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
CISH-203ENST00000491847 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
CISH-203ENST00000491847 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
CISH-203ENST00000491847 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
CISH-203ENST00000491847 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
CISH-203ENST00000491847 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
CISH-203ENST00000491847 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
CISH-203ENST00000491847 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
CISH-203ENST00000491847 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
CISH-203ENST00000491847 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
CISH-203ENST00000491847 KANK1Q14678 1352 aa16.76■□□□□ 0.27
CISH-203ENST00000491847 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
CISH-203ENST00000491847 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
CISH-203ENST00000491847 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
CISH-203ENST00000491847 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
CISH-203ENST00000491847 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
CISH-203ENST00000491847 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
CISH-203ENST00000491847 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
CISH-203ENST00000491847 HDGFP51858 240 aaKnown RBP16.71■□□□□ 0.27
CISH-203ENST00000491847 FRAT1Q92837 279 aaPredicted RBP16.71■□□□□ 0.26
CISH-203ENST00000491847 WIZO95785 1651 aa16.7■□□□□ 0.26
CISH-203ENST00000491847 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
CISH-203ENST00000491847 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
CISH-203ENST00000491847 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
CISH-203ENST00000491847 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
CISH-203ENST00000491847 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
CISH-203ENST00000491847 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
CISH-203ENST00000491847 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
CISH-203ENST00000491847 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
CISH-203ENST00000491847 TPRNQ4KMQ1 711 aa16.65■□□□□ 0.26
CISH-203ENST00000491847 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
CISH-203ENST00000491847 MS4A1P11836 297 aa16.64■□□□□ 0.26
CISH-203ENST00000491847 PLCB2Q00722 1185 aa16.64■□□□□ 0.25
CISH-203ENST00000491847 MAPK8IP3Q9UPT6 1336 aa16.64■□□□□ 0.25
CISH-203ENST00000491847 POGKQ9P215 609 aa16.64■□□□□ 0.25
CISH-203ENST00000491847 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
CISH-203ENST00000491847 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
CISH-203ENST00000491847 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
CISH-203ENST00000491847 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
CISH-203ENST00000491847 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
CISH-203ENST00000491847 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms