RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
NECTIN3-210ENST00000491525 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
NECTIN3-210ENST00000491525 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
NECTIN3-210ENST00000491525 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
NECTIN3-210ENST00000491525 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
NECTIN3-210ENST00000491525 MIER1Q8N108 512 aa14.24□□□□□ -0.13
NECTIN3-210ENST00000491525 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
NECTIN3-210ENST00000491525 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
NECTIN3-210ENST00000491525 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
NECTIN3-210ENST00000491525 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
NECTIN3-210ENST00000491525 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
NECTIN3-210ENST00000491525 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
NECTIN3-210ENST00000491525 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
NECTIN3-210ENST00000491525 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
NECTIN3-210ENST00000491525 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
NECTIN3-210ENST00000491525 GABBR2O75899 941 aa14.11□□□□□ -0.15
NECTIN3-210ENST00000491525 CLCN6P51797 869 aa14.11□□□□□ -0.15
NECTIN3-210ENST00000491525 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
NECTIN3-210ENST00000491525 WIZO95785 1651 aa14.05□□□□□ -0.16
NECTIN3-210ENST00000491525 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
NECTIN3-210ENST00000491525 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
NECTIN3-210ENST00000491525 NESP48681 1621 aa13.97□□□□□ -0.17
NECTIN3-210ENST00000491525 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
NECTIN3-210ENST00000491525 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
NECTIN3-210ENST00000491525 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
NECTIN3-210ENST00000491525 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
NECTIN3-210ENST00000491525 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
NECTIN3-210ENST00000491525 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
NECTIN3-210ENST00000491525 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
NECTIN3-210ENST00000491525 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
NECTIN3-210ENST00000491525 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
NECTIN3-210ENST00000491525 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
NECTIN3-210ENST00000491525 CUX2O14529 1486 aa13.84□□□□□ -0.19
NECTIN3-210ENST00000491525 GALR2O43603 387 aaPredicted RBP13.83□□□□□ -0.2
NECTIN3-210ENST00000491525 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
NECTIN3-210ENST00000491525 NUBP1P53384 320 aa13.82□□□□□ -0.2
NECTIN3-210ENST00000491525 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
NECTIN3-210ENST00000491525 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
NECTIN3-210ENST00000491525 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
NECTIN3-210ENST00000491525 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
NECTIN3-210ENST00000491525 CFTRP13569 1480 aa13.78□□□□□ -0.2
NECTIN3-210ENST00000491525 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
NECTIN3-210ENST00000491525 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
NECTIN3-210ENST00000491525 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
NECTIN3-210ENST00000491525 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
NECTIN3-210ENST00000491525 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
NECTIN3-210ENST00000491525 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
NECTIN3-210ENST00000491525 MRC2Q9UBG0 1479 aa13.7□□□□□ -0.22
NECTIN3-210ENST00000491525 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
NECTIN3-210ENST00000491525 MAP3K13O43283 966 aa13.69□□□□□ -0.22
NECTIN3-210ENST00000491525 WDR62O43379 1518 aa13.68□□□□□ -0.22
NECTIN3-210ENST00000491525 GSE1Q14687 1217 aa13.65□□□□□ -0.22
NECTIN3-210ENST00000491525 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
NECTIN3-210ENST00000491525 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
NECTIN3-210ENST00000491525 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
NECTIN3-210ENST00000491525 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
NECTIN3-210ENST00000491525 PCDHB13Q9Y5F0 798 aa13.63□□□□□ -0.23
NECTIN3-210ENST00000491525 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
NECTIN3-210ENST00000491525 LHX8Q68G74 356 aa13.59□□□□□ -0.23
NECTIN3-210ENST00000491525 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
NECTIN3-210ENST00000491525 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
NECTIN3-210ENST00000491525 PYGBP11216 843 aa13.56□□□□□ -0.24
NECTIN3-210ENST00000491525 TIE1P35590 1138 aa13.55□□□□□ -0.24
NECTIN3-210ENST00000491525 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
NECTIN3-210ENST00000491525 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
NECTIN3-210ENST00000491525 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
NECTIN3-210ENST00000491525 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
NECTIN3-210ENST00000491525 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
NECTIN3-210ENST00000491525 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
NECTIN3-210ENST00000491525 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
NECTIN3-210ENST00000491525 C7P10643 843 aa13.49□□□□□ -0.25
NECTIN3-210ENST00000491525 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
NECTIN3-210ENST00000491525 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
NECTIN3-210ENST00000491525 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.25
NECTIN3-210ENST00000491525 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
NECTIN3-210ENST00000491525 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
NECTIN3-210ENST00000491525 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
NECTIN3-210ENST00000491525 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
NECTIN3-210ENST00000491525 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
NECTIN3-210ENST00000491525 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
NECTIN3-210ENST00000491525 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
NECTIN3-210ENST00000491525 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
NECTIN3-210ENST00000491525 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
NECTIN3-210ENST00000491525 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
NECTIN3-210ENST00000491525 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
NECTIN3-210ENST00000491525 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
NECTIN3-210ENST00000491525 ZNF608Q9ULD9 1512 aaPredicted RBP13.37□□□□□ -0.27
NECTIN3-210ENST00000491525 CUX1P39880 1505 aa13.36□□□□□ -0.27
NECTIN3-210ENST00000491525 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
NECTIN3-210ENST00000491525 SEC24BO95487 1268 aa13.35□□□□□ -0.27
NECTIN3-210ENST00000491525 IER5LQ5T953 404 aa13.33□□□□□ -0.28
NECTIN3-210ENST00000491525 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
NECTIN3-210ENST00000491525 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
NECTIN3-210ENST00000491525 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
NECTIN3-210ENST00000491525 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
NECTIN3-210ENST00000491525 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
NECTIN3-210ENST00000491525 SOGA1O94964 1423 aa13.28□□□□□ -0.28
NECTIN3-210ENST00000491525 PSEN1P49768 467 aa13.27□□□□□ -0.29
NECTIN3-210ENST00000491525 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
NECTIN3-210ENST00000491525 PDAP1Q13442 181 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms