RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	TOP2B	Q02880	1626 aa		34.68	■■■■□ 3.14
CDK5RAP2-218	ENST00000491334	BIVM-ERCC5	R4GMW8	1640 aa		34.64	■■■■□ 3.14
CDK5RAP2-218	ENST00000491334	ABCC10	Q5T3U5	1492 aa		34.61	■■■■□ 3.13
CDK5RAP2-218	ENST00000491334	MAPKBP1	O60336	1514 aa		34.49	■■■■□ 3.11
CDK5RAP2-218	ENST00000491334	KDM4F	A0A1W2PPD8	638 aa		34.44	■■■■□ 3.1
CDK5RAP2-218	ENST00000491334	DIP2B	Q9P265	1576 aa		34.4	■■■■□ 3.1
CDK5RAP2-218	ENST00000491334	RUSC2	Q8N2Y8	1516 aa		34.4	■■■■□ 3.1
CDK5RAP2-218	ENST00000491334	ADCY10	Q96PN6	1610 aa		34.35	■■■■□ 3.09
CDK5RAP2-218	ENST00000491334	KDM6B	O15054	1643 aa		34.33	■■■■□ 3.09
CDK5RAP2-218	ENST00000491334	KIAA0586	Q9BVV6	1533 aa		34.3	■■■■□ 3.08
CDK5RAP2-218	ENST00000491334	IGF1R	P08069	1367 aa		34.22	■■■■□ 3.07
CDK5RAP2-218	ENST00000491334	TSPOAP1	O95153	1857 aa		34.2	■■■■□ 3.06
CDK5RAP2-218	ENST00000491334	PTPRG	P23470	1445 aa		34.19	■■■■□ 3.06
CDK5RAP2-218	ENST00000491334	ILDR1	Q86SU0	546 aa	Predicted RBP	34.14	■■■■□ 3.06
CDK5RAP2-218	ENST00000491334	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.12	■■■■□ 3.05
CDK5RAP2-218	ENST00000491334	KIF27	Q86VH2	1401 aa		34.11	■■■■□ 3.05
CDK5RAP2-218	ENST00000491334	CARMIL2	Q6F5E8	1435 aa		34.04	■■■■□ 3.04
CDK5RAP2-218	ENST00000491334	TNIK	Q9UKE5	1360 aa		34.04	■■■■□ 3.04
CDK5RAP2-218	ENST00000491334	CUL7	Q14999	1698 aa		34.03	■■■■□ 3.04
CDK5RAP2-218	ENST00000491334	ABCC2	Q92887	1545 aa		34.02	■■■■□ 3.04
CDK5RAP2-218	ENST00000491334	PLB1	Q6P1J6	1458 aa		34.01	■■■■□ 3.04
CDK5RAP2-218	ENST00000491334	ASXL2	Q76L83	1435 aa		33.99	■■■■□ 3.03
CDK5RAP2-218	ENST00000491334	CARMIL1	Q5VZK9	1371 aa		33.97	■■■■□ 3.03
CDK5RAP2-218	ENST00000491334	GLI2	P10070	1586 aa		33.94	■■■■□ 3.02
CDK5RAP2-218	ENST00000491334	ADGRL1	O94910	1474 aa		33.89	■■■■□ 3.02
CDK5RAP2-218	ENST00000491334	UHRF1BP1L	A0JNW5	1464 aa		33.88	■■■■□ 3.01
CDK5RAP2-218	ENST00000491334	UACA	Q9BZF9	1416 aa		33.86	■■■■□ 3.01
CDK5RAP2-218	ENST00000491334	PPRC1	Q5VV67	1664 aa	Known RBP	33.83	■■■■□ 3.01
CDK5RAP2-218	ENST00000491334	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.79	■■■■□ 3
CDK5RAP2-218	ENST00000491334	IQGAP2	Q13576	1575 aa		33.78	■■■■□ 3
CDK5RAP2-218	ENST00000491334	EPRS	P07814	1512 aa	Known RBP	33.76	■■■■□ 3
CDK5RAP2-218	ENST00000491334	TEX14	Q8IWB6	1497 aa		33.75	■■■□□ 2.99
CDK5RAP2-218	ENST00000491334	KDM5B	Q9UGL1	1544 aa		33.72	■■■□□ 2.99
CDK5RAP2-218	ENST00000491334	DISP1	Q96F81	1524 aa		33.7	■■■□□ 2.99
CDK5RAP2-218	ENST00000491334	MAP3K4	Q9Y6R4	1608 aa		33.66	■■■□□ 2.98
CDK5RAP2-218	ENST00000491334	HECW2	Q9P2P5	1572 aa		33.62	■■■□□ 2.97
CDK5RAP2-218	ENST00000491334	UGGT2	Q9NYU1	1516 aa		33.57	■■■□□ 2.96
CDK5RAP2-218	ENST00000491334	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.56	■■■□□ 2.96
CDK5RAP2-218	ENST00000491334	RAPGEF2	Q9Y4G8	1499 aa		33.53	■■■□□ 2.96
CDK5RAP2-218	ENST00000491334	WDR7	Q9Y4E6	1490 aa		33.51	■■■□□ 2.96
CDK5RAP2-218	ENST00000491334	CD109	Q6YHK3	1445 aa		33.47	■■■□□ 2.95
CDK5RAP2-218	ENST00000491334	KCNH8	Q96L42	1107 aa		33.47	■■■□□ 2.95
CDK5RAP2-218	ENST00000491334	KIAA0556	O60303	1618 aa		33.46	■■■□□ 2.95
CDK5RAP2-218	ENST00000491334	MAGI3	Q5TCQ9	1506 aa		33.42	■■■□□ 2.94
CDK5RAP2-218	ENST00000491334	GOLGA3	Q08378	1498 aa		33.31	■■■□□ 2.92
CDK5RAP2-218	ENST00000491334	FBXO41	Q8TF61	875 aa		33.31	■■■□□ 2.92
CDK5RAP2-218	ENST00000491334	CFAP43	Q8NDM7	1665 aa		33.31	■■■□□ 2.92
CDK5RAP2-218	ENST00000491334	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.28	■■■□□ 2.92
CDK5RAP2-218	ENST00000491334	ABCA8	O94911	1581 aa		33.23	■■■□□ 2.91
CDK5RAP2-218	ENST00000491334	ARAP3	Q8WWN8	1544 aa		33.18	■■■□□ 2.9
CDK5RAP2-218	ENST00000491334	KIF21B	O75037	1637 aa		33.15	■■■□□ 2.9
CDK5RAP2-218	ENST00000491334	PHLDB1	Q86UU1	1377 aa		33.15	■■■□□ 2.9
CDK5RAP2-218	ENST00000491334	CTTNBP2	Q8WZ74	1663 aa		33.13	■■■□□ 2.89
CDK5RAP2-218	ENST00000491334	ARID3C	A6NKF2	412 aa		33.09	■■■□□ 2.89
CDK5RAP2-218	ENST00000491334	PTPRM	P28827	1452 aa		33.06	■■■□□ 2.88
CDK5RAP2-218	ENST00000491334	RAPGEF3	O95398	923 aa		33.04	■■■□□ 2.88
CDK5RAP2-218	ENST00000491334	ATP10B	O94823	1461 aa		33.04	■■■□□ 2.88
CDK5RAP2-218	ENST00000491334	P3H3	Q8IVL6	736 aa		33.01	■■■□□ 2.87
CDK5RAP2-218	ENST00000491334	ARID4B	Q4LE39	1312 aa	Predicted RBP	33	■■■□□ 2.87
CDK5RAP2-218	ENST00000491334	ADAMTSL3	P82987	1691 aa		32.97	■■■□□ 2.87
CDK5RAP2-218	ENST00000491334	PRX	Q9BXM0	1461 aa		32.97	■■■□□ 2.87
CDK5RAP2-218	ENST00000491334	ABCA9	Q8IUA7	1624 aa		32.93	■■■□□ 2.86
CDK5RAP2-218	ENST00000491334	NEO1	Q92859	1461 aa		32.93	■■■□□ 2.86
CDK5RAP2-218	ENST00000491334	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.92	■■■□□ 2.86
CDK5RAP2-218	ENST00000491334	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.92	■■■□□ 2.86
CDK5RAP2-218	ENST00000491334	PCF11	O94913	1555 aa	Known RBP	32.83	■■■□□ 2.85
CDK5RAP2-218	ENST00000491334	BCORL1	Q5H9F3	1711 aa		32.82	■■■□□ 2.84
CDK5RAP2-218	ENST00000491334	LMTK3	Q96Q04	1460 aa		32.79	■■■□□ 2.84
CDK5RAP2-218	ENST00000491334	MADD	Q8WXG6	1647 aa		32.77	■■■□□ 2.84
CDK5RAP2-218	ENST00000491334	PLEKHD1	A6NEE1	506 aa		32.73	■■■□□ 2.83
CDK5RAP2-218	ENST00000491334	RAPGEF6	Q8TEU7	1601 aa		32.72	■■■□□ 2.83
CDK5RAP2-218	ENST00000491334	FRMPD1	Q5SYB0	1578 aa		32.71	■■■□□ 2.83
CDK5RAP2-218	ENST00000491334	DENND4B	O75064	1496 aa	Predicted RBP	32.71	■■■□□ 2.83
CDK5RAP2-218	ENST00000491334	HSPA2	P54652	639 aa		32.7	■■■□□ 2.83
CDK5RAP2-218	ENST00000491334	PLPPR3	Q6T4P5	718 aa		32.67	■■■□□ 2.82
CDK5RAP2-218	ENST00000491334	CSRNP3	Q8WYN3	585 aa		32.67	■■■□□ 2.82
CDK5RAP2-218	ENST00000491334	POGZ	Q7Z3K3	1410 aa		32.67	■■■□□ 2.82
CDK5RAP2-218	ENST00000491334	AKNA	Q7Z591	1439 aa		32.66	■■■□□ 2.82
CDK5RAP2-218	ENST00000491334	SAMD9	Q5K651	1589 aa		32.66	■■■□□ 2.82
CDK5RAP2-218	ENST00000491334	NUP153	P49790	1475 aa	Known RBP	32.63	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	FHOD3	Q2V2M9	1422 aa		32.63	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	CERK	Q8TCT0	537 aa		32.63	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	RIMS1	Q86UR5	1692 aa	Known RBP	32.62	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	ARHGEF40	Q8TER5	1519 aa		32.61	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	RANGAP1	P46060	587 aa	Predicted RBP	32.59	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	FANCA	O15360	1455 aa		32.59	■■■□□ 2.81
CDK5RAP2-218	ENST00000491334	RICTOR	Q6R327	1708 aa		32.54	■■■□□ 2.8
CDK5RAP2-218	ENST00000491334	MLEC	Q14165	292 aa		32.53	■■■□□ 2.8
CDK5RAP2-218	ENST00000491334	CFAP74	Q9C0B2	1584 aa		32.51	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	MAGI2	Q86UL8	1455 aa		32.5	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	YEATS2	Q9ULM3	1422 aa		32.48	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	EFCAB5	A4FU69	1503 aa		32.47	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	ZMYM4	Q5VZL5	1548 aa		32.47	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	ZFYVE16	Q7Z3T8	1539 aa		32.47	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.47	■■■□□ 2.79
CDK5RAP2-218	ENST00000491334	DMRT2	Q9Y5R5	561 aa		32.39	■■■□□ 2.78
CDK5RAP2-218	ENST00000491334	SCAPER	Q9BY12	1400 aa		32.39	■■■□□ 2.78
CDK5RAP2-218	ENST00000491334	HECW1	Q76N89	1606 aa		32.36	■■■□□ 2.77
CDK5RAP2-218	ENST00000491334	PLCH2	O75038	1416 aa		32.35	■■■□□ 2.77
CDK5RAP2-218	ENST00000491334	TTC37	Q6PGP7	1564 aa		32.35	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms