RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
CTDSP1-210ENST00000491064 ABCC10Q5T3U5 1492 aa24.54■■□□□ 1.52
CTDSP1-210ENST00000491064 FAM69CQ0P6D2 419 aa24.51■■□□□ 1.51
CTDSP1-210ENST00000491064 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
CTDSP1-210ENST00000491064 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
CTDSP1-210ENST00000491064 ADCY10Q96PN6 1610 aa24.47■■□□□ 1.51
CTDSP1-210ENST00000491064 NPM1P06748 294 aaKnown RBP eCLIP24.46■■□□□ 1.51
CTDSP1-210ENST00000491064 KIAA0586Q9BVV6 1533 aa24.37■■□□□ 1.49
CTDSP1-210ENST00000491064 KDM6BO15054 1643 aa24.36■■□□□ 1.49
CTDSP1-210ENST00000491064 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
CTDSP1-210ENST00000491064 IGF1RP08069 1367 aa24.3■■□□□ 1.48
CTDSP1-210ENST00000491064 CUL7Q14999 1698 aa24.3■■□□□ 1.48
CTDSP1-210ENST00000491064 KDM4FA0A1W2PPD8 638 aa24.29■■□□□ 1.48
CTDSP1-210ENST00000491064 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
CTDSP1-210ENST00000491064 PTPRGP23470 1445 aa24.21■■□□□ 1.47
CTDSP1-210ENST00000491064 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
CTDSP1-210ENST00000491064 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.45
CTDSP1-210ENST00000491064 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
CTDSP1-210ENST00000491064 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
CTDSP1-210ENST00000491064 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
CTDSP1-210ENST00000491064 CARMIL2Q6F5E8 1435 aa24.12■■□□□ 1.45
CTDSP1-210ENST00000491064 GLI2P10070 1586 aa24.12■■□□□ 1.45
CTDSP1-210ENST00000491064 ASXL2Q76L83 1435 aa24.11■■□□□ 1.45
CTDSP1-210ENST00000491064 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
CTDSP1-210ENST00000491064 IQGAP2Q13576 1575 aa24.08■■□□□ 1.45
CTDSP1-210ENST00000491064 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
CTDSP1-210ENST00000491064 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
CTDSP1-210ENST00000491064 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
CTDSP1-210ENST00000491064 ADGRL1O94910 1474 aa24■■□□□ 1.43
CTDSP1-210ENST00000491064 COL17A1Q9UMD9 1497 aaPredicted RBP23.98■■□□□ 1.43
CTDSP1-210ENST00000491064 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
CTDSP1-210ENST00000491064 MAP3K4Q9Y6R4 1608 aa23.98■■□□□ 1.43
CTDSP1-210ENST00000491064 ILDR1Q86SU0 546 aaPredicted RBP23.97■■□□□ 1.43
CTDSP1-210ENST00000491064 KDM5BQ9UGL1 1544 aa23.97■■□□□ 1.43
CTDSP1-210ENST00000491064 ZCCHC11Q5TAX3 1644 aaKnown RBP23.92■■□□□ 1.42
CTDSP1-210ENST00000491064 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
CTDSP1-210ENST00000491064 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
CTDSP1-210ENST00000491064 KIAA0556O60303 1618 aa23.88■■□□□ 1.41
CTDSP1-210ENST00000491064 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
CTDSP1-210ENST00000491064 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
CTDSP1-210ENST00000491064 WDR7Q9Y4E6 1490 aa23.81■■□□□ 1.4
CTDSP1-210ENST00000491064 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
CTDSP1-210ENST00000491064 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
CTDSP1-210ENST00000491064 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
CTDSP1-210ENST00000491064 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
CTDSP1-210ENST00000491064 ABCA8O94911 1581 aa23.69■■□□□ 1.38
CTDSP1-210ENST00000491064 GOLGA3Q08378 1498 aa23.67■■□□□ 1.38
CTDSP1-210ENST00000491064 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
CTDSP1-210ENST00000491064 KIF21BO75037 1637 aa23.61■■□□□ 1.37
CTDSP1-210ENST00000491064 ARAP3Q8WWN8 1544 aa23.54■■□□□ 1.36
CTDSP1-210ENST00000491064 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
CTDSP1-210ENST00000491064 ATP10BO94823 1461 aa23.48■■□□□ 1.35
CTDSP1-210ENST00000491064 ABCA9Q8IUA7 1624 aa23.47■■□□□ 1.35
CTDSP1-210ENST00000491064 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
CTDSP1-210ENST00000491064 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
CTDSP1-210ENST00000491064 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
CTDSP1-210ENST00000491064 PTPRMP28827 1452 aa23.42■■□□□ 1.34
CTDSP1-210ENST00000491064 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
CTDSP1-210ENST00000491064 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
CTDSP1-210ENST00000491064 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
CTDSP1-210ENST00000491064 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
CTDSP1-210ENST00000491064 NEO1Q92859 1461 aa23.37■■□□□ 1.33
CTDSP1-210ENST00000491064 SAMD9Q5K651 1589 aa23.36■■□□□ 1.33
CTDSP1-210ENST00000491064 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
CTDSP1-210ENST00000491064 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
CTDSP1-210ENST00000491064 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
CTDSP1-210ENST00000491064 MADDQ8WXG6 1647 aa23.32■■□□□ 1.32
CTDSP1-210ENST00000491064 PCF11O94913 1555 aaKnown RBP23.28■■□□□ 1.32
CTDSP1-210ENST00000491064 NUP153P49790 1475 aaKnown RBP23.26■■□□□ 1.31
CTDSP1-210ENST00000491064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
CTDSP1-210ENST00000491064 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
CTDSP1-210ENST00000491064 ARID4BQ4LE39 1312 aaPredicted RBP23.26■■□□□ 1.31
CTDSP1-210ENST00000491064 LMTK3Q96Q04 1460 aa23.25■■□□□ 1.31
CTDSP1-210ENST00000491064 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
CTDSP1-210ENST00000491064 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
CTDSP1-210ENST00000491064 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-210ENST00000491064 CSRNP3Q8WYN3 585 aa23.2■■□□□ 1.3
CTDSP1-210ENST00000491064 DENND4BO75064 1496 aaPredicted RBP23.19■■□□□ 1.3
CTDSP1-210ENST00000491064 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
CTDSP1-210ENST00000491064 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
CTDSP1-210ENST00000491064 CFAP74Q9C0B2 1584 aa23.16■■□□□ 1.3
CTDSP1-210ENST00000491064 FANCAO15360 1455 aa23.14■■□□□ 1.29
CTDSP1-210ENST00000491064 PLEKHD1A6NEE1 506 aa23.14■■□□□ 1.29
CTDSP1-210ENST00000491064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.292e-6■■■■■ 43
CTDSP1-210ENST00000491064 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
CTDSP1-210ENST00000491064 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
CTDSP1-210ENST00000491064 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
CTDSP1-210ENST00000491064 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
CTDSP1-210ENST00000491064 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
CTDSP1-210ENST00000491064 HSPA2P54652 639 aa23.09■■□□□ 1.29
CTDSP1-210ENST00000491064 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.29
CTDSP1-210ENST00000491064 EFCAB5A4FU69 1503 aa23.08■■□□□ 1.28
CTDSP1-210ENST00000491064 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.28
CTDSP1-210ENST00000491064 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
CTDSP1-210ENST00000491064 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
CTDSP1-210ENST00000491064 EEA1Q15075 1411 aa23.04■■□□□ 1.28
CTDSP1-210ENST00000491064 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
CTDSP1-210ENST00000491064 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
CTDSP1-210ENST00000491064 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
CTDSP1-210ENST00000491064 MLECQ14165 292 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms