RNA–Protein interactions for RNA: ENST00000490904.6

MAP3K4-207, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-207ENST00000490904 RBM19Q9Y4C8 960 aaKnown RBP18.12■□□□□ 0.49
MAP3K4-207ENST00000490904 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
MAP3K4-207ENST00000490904 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.48
MAP3K4-207ENST00000490904 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
MAP3K4-207ENST00000490904 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
MAP3K4-207ENST00000490904 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
MAP3K4-207ENST00000490904 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
MAP3K4-207ENST00000490904 BECN1Q14457 450 aa18.03■□□□□ 0.48
MAP3K4-207ENST00000490904 FBLN2P98095 1184 aa18.01■□□□□ 0.47
MAP3K4-207ENST00000490904 ARXQ96QS3 562 aa17.99■□□□□ 0.47
MAP3K4-207ENST00000490904 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
MAP3K4-207ENST00000490904 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
MAP3K4-207ENST00000490904 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
MAP3K4-207ENST00000490904 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
MAP3K4-207ENST00000490904 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
MAP3K4-207ENST00000490904 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
MAP3K4-207ENST00000490904 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
MAP3K4-207ENST00000490904 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
MAP3K4-207ENST00000490904 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
MAP3K4-207ENST00000490904 TRIM44Q96DX7 344 aaPredicted RBP17.9■□□□□ 0.46
MAP3K4-207ENST00000490904 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
MAP3K4-207ENST00000490904 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
MAP3K4-207ENST00000490904 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
MAP3K4-207ENST00000490904 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
MAP3K4-207ENST00000490904 SOGA1O94964 1423 aa17.87■□□□□ 0.45
MAP3K4-207ENST00000490904 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
MAP3K4-207ENST00000490904 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
MAP3K4-207ENST00000490904 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
MAP3K4-207ENST00000490904 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
MAP3K4-207ENST00000490904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.442e-6■■■□□ 16.9
MAP3K4-207ENST00000490904 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
MAP3K4-207ENST00000490904 NACADO15069 1562 aa17.76■□□□□ 0.43
MAP3K4-207ENST00000490904 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
MAP3K4-207ENST00000490904 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
MAP3K4-207ENST00000490904 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
MAP3K4-207ENST00000490904 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
MAP3K4-207ENST00000490904 NAP1L5Q96NT1 182 aaPredicted RBP17.74■□□□□ 0.43
MAP3K4-207ENST00000490904 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
MAP3K4-207ENST00000490904 RGS3P49796 1198 aa17.72■□□□□ 0.43
MAP3K4-207ENST00000490904 CDCA8Q53HL2 280 aa17.71■□□□□ 0.43
MAP3K4-207ENST00000490904 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.42
MAP3K4-207ENST00000490904 HSPA5P11021 654 aaKnown RBP17.7■□□□□ 0.42
MAP3K4-207ENST00000490904 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
MAP3K4-207ENST00000490904 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
MAP3K4-207ENST00000490904 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
MAP3K4-207ENST00000490904 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
MAP3K4-207ENST00000490904 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
MAP3K4-207ENST00000490904 PPP1R15AO75807 674 aaPredicted RBP17.68■□□□□ 0.42
MAP3K4-207ENST00000490904 L1TD1Q5T7N2 865 aaKnown RBP17.68■□□□□ 0.42
MAP3K4-207ENST00000490904 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
MAP3K4-207ENST00000490904 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
MAP3K4-207ENST00000490904 TNNT2P45379 298 aaPredicted RBP17.65■□□□□ 0.42
MAP3K4-207ENST00000490904 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
MAP3K4-207ENST00000490904 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
MAP3K4-207ENST00000490904 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
MAP3K4-207ENST00000490904 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
MAP3K4-207ENST00000490904 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
MAP3K4-207ENST00000490904 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
MAP3K4-207ENST00000490904 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
MAP3K4-207ENST00000490904 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
MAP3K4-207ENST00000490904 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.41
MAP3K4-207ENST00000490904 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.4
MAP3K4-207ENST00000490904 NUDCQ9Y266 331 aa17.58■□□□□ 0.4
MAP3K4-207ENST00000490904 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
MAP3K4-207ENST00000490904 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
MAP3K4-207ENST00000490904 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
MAP3K4-207ENST00000490904 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
MAP3K4-207ENST00000490904 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
MAP3K4-207ENST00000490904 MS4A1P11836 297 aa17.55■□□□□ 0.4
MAP3K4-207ENST00000490904 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
MAP3K4-207ENST00000490904 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
MAP3K4-207ENST00000490904 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
MAP3K4-207ENST00000490904 DNTTIP2Q5QJE6 756 aaKnown RBP17.53■□□□□ 0.4
MAP3K4-207ENST00000490904 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
MAP3K4-207ENST00000490904 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
MAP3K4-207ENST00000490904 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
MAP3K4-207ENST00000490904 RALBP1Q15311 655 aa17.49■□□□□ 0.39
MAP3K4-207ENST00000490904 TMF1P82094 1093 aa17.49■□□□□ 0.39
MAP3K4-207ENST00000490904 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
MAP3K4-207ENST00000490904 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
MAP3K4-207ENST00000490904 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
MAP3K4-207ENST00000490904 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
MAP3K4-207ENST00000490904 CUX2O14529 1486 aa17.46■□□□□ 0.39
MAP3K4-207ENST00000490904 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
MAP3K4-207ENST00000490904 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
MAP3K4-207ENST00000490904 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
MAP3K4-207ENST00000490904 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
MAP3K4-207ENST00000490904 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
MAP3K4-207ENST00000490904 MSNP26038 577 aaKnown RBP17.43■□□□□ 0.38
MAP3K4-207ENST00000490904 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
MAP3K4-207ENST00000490904 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
MAP3K4-207ENST00000490904 ZBED9Q6R2W3 1325 aa17.41■□□□□ 0.38
MAP3K4-207ENST00000490904 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
MAP3K4-207ENST00000490904 PTMSP20962 102 aa17.39■□□□□ 0.37
MAP3K4-207ENST00000490904 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
MAP3K4-207ENST00000490904 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
MAP3K4-207ENST00000490904 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
MAP3K4-207ENST00000490904 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
MAP3K4-207ENST00000490904 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
MAP3K4-207ENST00000490904 FOXD1Q16676 465 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms