RNA–Protein interactions for RNA: ENST00000490478.5

CACNA2D3-210, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-210ENST00000490478 PPP4R2Q9NY27 417 aa9.49□□□□□ -0.89
CACNA2D3-210ENST00000490478 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
CACNA2D3-210ENST00000490478 DDX10Q13206 875 aaKnown RBP9.49□□□□□ -0.89
CACNA2D3-210ENST00000490478 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
CACNA2D3-210ENST00000490478 NEFMP07197 916 aa9.48□□□□□ -0.89
CACNA2D3-210ENST00000490478 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
CACNA2D3-210ENST00000490478 ANP32AP39687 249 aaKnown RBP9.46□□□□□ -0.89
CACNA2D3-210ENST00000490478 RBM10P98175 930 aaKnown RBP9.46□□□□□ -0.9
CACNA2D3-210ENST00000490478 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.9
CACNA2D3-210ENST00000490478 FGD1P98174 961 aa9.45□□□□□ -0.9
CACNA2D3-210ENST00000490478 AAMPQ13685 434 aa9.45□□□□□ -0.9
CACNA2D3-210ENST00000490478 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
CACNA2D3-210ENST00000490478 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
CACNA2D3-210ENST00000490478 PPP1R15AO75807 674 aaPredicted RBP9.43□□□□□ -0.9
CACNA2D3-210ENST00000490478 ABCC9O60706 1549 aa9.43□□□□□ -0.9
CACNA2D3-210ENST00000490478 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
CACNA2D3-210ENST00000490478 PDE4CQ08493 712 aa9.42□□□□□ -0.9
CACNA2D3-210ENST00000490478 FAM43AQ8N2R8 423 aa9.42□□□□□ -0.9
CACNA2D3-210ENST00000490478 GSE1Q14687 1217 aa9.41□□□□□ -0.9
CACNA2D3-210ENST00000490478 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
CACNA2D3-210ENST00000490478 FRAT1Q92837 279 aaPredicted RBP9.38□□□□□ -0.91
CACNA2D3-210ENST00000490478 TNIKQ9UKE5 1360 aa9.38□□□□□ -0.91
CACNA2D3-210ENST00000490478 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
CACNA2D3-210ENST00000490478 DCAF11Q8TEB1 546 aa9.37□□□□□ -0.91
CACNA2D3-210ENST00000490478 HSP90AA2PQ14568 343 aaPredicted RBP9.37□□□□□ -0.91
CACNA2D3-210ENST00000490478 ANP32CO43423 234 aa9.36□□□□□ -0.91
CACNA2D3-210ENST00000490478 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
CACNA2D3-210ENST00000490478 RRAGDQ9NQL2 400 aaPredicted RBP9.34□□□□□ -0.91
CACNA2D3-210ENST00000490478 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
CACNA2D3-210ENST00000490478 PDIA4P13667 645 aaKnown RBP9.34□□□□□ -0.91
CACNA2D3-210ENST00000490478 SIN3AQ96ST3 1273 aa9.34□□□□□ -0.91
CACNA2D3-210ENST00000490478 EEA1Q15075 1411 aa9.33□□□□□ -0.92
CACNA2D3-210ENST00000490478 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
CACNA2D3-210ENST00000490478 PPM1GO15355 546 aaPredicted RBP9.33□□□□□ -0.92
CACNA2D3-210ENST00000490478 HIRIP3Q9BW71 556 aaPredicted RBP9.33□□□□□ -0.92
CACNA2D3-210ENST00000490478 WDR97A6NE52 1622 aa9.3□□□□□ -0.92
CACNA2D3-210ENST00000490478 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
CACNA2D3-210ENST00000490478 ABCC8Q09428 1581 aa9.29□□□□□ -0.92
CACNA2D3-210ENST00000490478 PRDM4Q9UKN5 801 aa9.29□□□□□ -0.92
CACNA2D3-210ENST00000490478 HSP90AA1P07900 732 aaKnown RBP9.28□□□□□ -0.92
CACNA2D3-210ENST00000490478 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
CACNA2D3-210ENST00000490478 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
CACNA2D3-210ENST00000490478 NCAPD3P42695 1498 aa9.27□□□□□ -0.92
CACNA2D3-210ENST00000490478 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.93
CACNA2D3-210ENST00000490478 SOGA1O94964 1423 aa9.24□□□□□ -0.93
CACNA2D3-210ENST00000490478 RGS3P49796 1198 aa9.24□□□□□ -0.93
CACNA2D3-210ENST00000490478 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
CACNA2D3-210ENST00000490478 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
CACNA2D3-210ENST00000490478 CLIP1P30622 1438 aa9.22□□□□□ -0.93
CACNA2D3-210ENST00000490478 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 RUSC2Q8N2Y8 1516 aa9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 PDE4AP27815 886 aa9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 EIF4G1Q04637 1599 aaKnown RBP9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 CALD1Q05682 793 aaKnown RBP9.2□□□□□ -0.94
CACNA2D3-210ENST00000490478 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 AKNAQ7Z591 1439 aa9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 VPS8Q8N3P4 1428 aa9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 FRAT2O75474 233 aaPredicted RBP9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 PNNQ9H307 717 aaKnown RBP9.19□□□□□ -0.94
CACNA2D3-210ENST00000490478 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
CACNA2D3-210ENST00000490478 CUX2O14529 1486 aa9.18□□□□□ -0.94
CACNA2D3-210ENST00000490478 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
CACNA2D3-210ENST00000490478 ARID4BQ4LE39 1312 aaPredicted RBP9.17□□□□□ -0.94
CACNA2D3-210ENST00000490478 CLCN1P35523 988 aa9.16□□□□□ -0.94
CACNA2D3-210ENST00000490478 ZBED9Q6R2W3 1325 aa9.15□□□□□ -0.94
CACNA2D3-210ENST00000490478 CENPJQ9HC77 1338 aaPredicted RBP9.15□□□□□ -0.94
CACNA2D3-210ENST00000490478 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.95
CACNA2D3-210ENST00000490478 GTF2E1P29083 439 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 RNF123Q5XPI4 1314 aa9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 TCERG1O14776 1098 aaKnown RBP9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 TAF7LQ5H9L4 462 aa9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 NAP1L2Q9ULW6 460 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D3-210ENST00000490478 PDCL3Q9H2J4 239 aa9.13□□□□□ -0.95
CACNA2D3-210ENST00000490478 FAM9BQ8IZU0 186 aa9.13□□□□□ -0.95
CACNA2D3-210ENST00000490478 POGKQ9P215 609 aa9.13□□□□□ -0.95
CACNA2D3-210ENST00000490478 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
CACNA2D3-210ENST00000490478 CHMP4BQ9H444 224 aaKnown RBP9.12□□□□□ -0.95
CACNA2D3-210ENST00000490478 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
CACNA2D3-210ENST00000490478 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
CACNA2D3-210ENST00000490478 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
CACNA2D3-210ENST00000490478 CEP164Q9UPV0 1460 aa9.1□□□□□ -0.95
CACNA2D3-210ENST00000490478 PAXIP1Q6ZW49 1069 aaPredicted RBP9.1□□□□□ -0.95
CACNA2D3-210ENST00000490478 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
CACNA2D3-210ENST00000490478 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
CACNA2D3-210ENST00000490478 SMG6Q86US8 1419 aaKnown RBP9.09□□□□□ -0.95
CACNA2D3-210ENST00000490478 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CACNA2D3-210ENST00000490478 MS4A1P11836 297 aa9.08□□□□□ -0.96
CACNA2D3-210ENST00000490478 SKAP1Q86WV1 359 aa9.08□□□□□ -0.96
CACNA2D3-210ENST00000490478 KIF21BO75037 1637 aa9.07□□□□□ -0.96
CACNA2D3-210ENST00000490478 XRCC6P12956 609 aaKnown RBP eCLIP9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 FOXD1Q16676 465 aa9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 ZHX1Q9UKY1 873 aaPredicted RBP9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 L1TD1Q5T7N2 865 aaKnown RBP9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
CACNA2D3-210ENST00000490478 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
CACNA2D3-210ENST00000490478 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms