RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
CCT3-213ENST00000489870 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
CCT3-213ENST00000489870 IGF1RP08069 1367 aa16.58■□□□□ 0.24
CCT3-213ENST00000489870 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
CCT3-213ENST00000489870 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
CCT3-213ENST00000489870 CUL7Q14999 1698 aa16.53■□□□□ 0.24
CCT3-213ENST00000489870 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
CCT3-213ENST00000489870 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
CCT3-213ENST00000489870 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCT3-213ENST00000489870 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
CCT3-213ENST00000489870 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
CCT3-213ENST00000489870 CARMIL2Q6F5E8 1435 aa16.39■□□□□ 0.21
CCT3-213ENST00000489870 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
CCT3-213ENST00000489870 PTPRGP23470 1445 aa16.35■□□□□ 0.21
CCT3-213ENST00000489870 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.2
CCT3-213ENST00000489870 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
CCT3-213ENST00000489870 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
CCT3-213ENST00000489870 KIF13AQ9H1H9 1805 aa16.3■□□□□ 0.2
CCT3-213ENST00000489870 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
CCT3-213ENST00000489870 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
CCT3-213ENST00000489870 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
CCT3-213ENST00000489870 UHRF1BP1LA0JNW5 1464 aa16.27■□□□□ 0.19
CCT3-213ENST00000489870 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
CCT3-213ENST00000489870 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
CCT3-213ENST00000489870 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
CCT3-213ENST00000489870 UACAQ9BZF9 1416 aa16.21■□□□□ 0.19
CCT3-213ENST00000489870 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
CCT3-213ENST00000489870 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
CCT3-213ENST00000489870 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
CCT3-213ENST00000489870 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
CCT3-213ENST00000489870 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
CCT3-213ENST00000489870 GLI2P10070 1586 aa16.16■□□□□ 0.18
CCT3-213ENST00000489870 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
CCT3-213ENST00000489870 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
CCT3-213ENST00000489870 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
CCT3-213ENST00000489870 EEA1Q15075 1411 aa16.11■□□□□ 0.17
CCT3-213ENST00000489870 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
CCT3-213ENST00000489870 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
CCT3-213ENST00000489870 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
CCT3-213ENST00000489870 KDM6BO15054 1643 aa16.06■□□□□ 0.16
CCT3-213ENST00000489870 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
CCT3-213ENST00000489870 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
CCT3-213ENST00000489870 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
CCT3-213ENST00000489870 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
CCT3-213ENST00000489870 ABCA8O94911 1581 aa16■□□□□ 0.15
CCT3-213ENST00000489870 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
CCT3-213ENST00000489870 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
CCT3-213ENST00000489870 PPRC1Q5VV67 1664 aaKnown RBP15.95■□□□□ 0.14
CCT3-213ENST00000489870 MAGI3Q5TCQ9 1506 aa15.95■□□□□ 0.14
CCT3-213ENST00000489870 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
CCT3-213ENST00000489870 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
CCT3-213ENST00000489870 MSH5O43196 834 aa15.92■□□□□ 0.14
CCT3-213ENST00000489870 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
CCT3-213ENST00000489870 CD109Q6YHK3 1445 aa15.92■□□□□ 0.14
CCT3-213ENST00000489870 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
CCT3-213ENST00000489870 SAMD9Q5K651 1589 aa15.9■□□□□ 0.14
CCT3-213ENST00000489870 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
CCT3-213ENST00000489870 ATP10BO94823 1461 aa15.89■□□□□ 0.13
CCT3-213ENST00000489870 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
CCT3-213ENST00000489870 ADRA2BP18089 450 aa15.87■□□□□ 0.13
CCT3-213ENST00000489870 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
CCT3-213ENST00000489870 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
CCT3-213ENST00000489870 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
CCT3-213ENST00000489870 KIF21BO75037 1637 aa15.83■□□□□ 0.13
CCT3-213ENST00000489870 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
CCT3-213ENST00000489870 RAPGEF6Q8TEU7 1601 aa15.82■□□□□ 0.12
CCT3-213ENST00000489870 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
CCT3-213ENST00000489870 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
CCT3-213ENST00000489870 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
CCT3-213ENST00000489870 NEO1Q92859 1461 aa15.78■□□□□ 0.12
CCT3-213ENST00000489870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
CCT3-213ENST00000489870 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
CCT3-213ENST00000489870 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
CCT3-213ENST00000489870 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
CCT3-213ENST00000489870 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
CCT3-213ENST00000489870 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
CCT3-213ENST00000489870 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
CCT3-213ENST00000489870 FHOD3Q2V2M9 1422 aa15.71■□□□□ 0.11
CCT3-213ENST00000489870 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
CCT3-213ENST00000489870 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
CCT3-213ENST00000489870 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
CCT3-213ENST00000489870 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
CCT3-213ENST00000489870 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
CCT3-213ENST00000489870 DENND4BO75064 1496 aaPredicted RBP15.62■□□□□ 0.09
CCT3-213ENST00000489870 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
CCT3-213ENST00000489870 PLCH2O75038 1416 aa15.6■□□□□ 0.09
CCT3-213ENST00000489870 FANCAO15360 1455 aa15.6■□□□□ 0.09
CCT3-213ENST00000489870 ARHGAP35Q9NRY4 1499 aa15.6■□□□□ 0.09
CCT3-213ENST00000489870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCT3-213ENST00000489870 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
CCT3-213ENST00000489870 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
CCT3-213ENST00000489870 ZMYM4Q5VZL5 1548 aa15.54■□□□□ 0.08
CCT3-213ENST00000489870 CLIP1P30622 1438 aa15.54■□□□□ 0.08
CCT3-213ENST00000489870 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
CCT3-213ENST00000489870 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
CCT3-213ENST00000489870 ADAMTSL3P82987 1691 aa15.54■□□□□ 0.08
CCT3-213ENST00000489870 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
CCT3-213ENST00000489870 ATP1B4Q9UN42 357 aaPredicted RBP15.53■□□□□ 0.08
CCT3-213ENST00000489870 FRMPD1Q5SYB0 1578 aa15.52■□□□□ 0.07
CCT3-213ENST00000489870 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms