RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
TNRC6B-208ENST00000489500 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
TNRC6B-208ENST00000489500 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
TNRC6B-208ENST00000489500 MIER1Q8N108 512 aa17.04■□□□□ 0.32
TNRC6B-208ENST00000489500 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
TNRC6B-208ENST00000489500 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
TNRC6B-208ENST00000489500 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
TNRC6B-208ENST00000489500 CLCN6P51797 869 aa16.94■□□□□ 0.3
TNRC6B-208ENST00000489500 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
TNRC6B-208ENST00000489500 PLCD3Q8N3E9 789 aa16.91■□□□□ 0.3
TNRC6B-208ENST00000489500 GALR2O43603 387 aaPredicted RBP16.89■□□□□ 0.29
TNRC6B-208ENST00000489500 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
TNRC6B-208ENST00000489500 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
TNRC6B-208ENST00000489500 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
TNRC6B-208ENST00000489500 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
TNRC6B-208ENST00000489500 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
TNRC6B-208ENST00000489500 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
TNRC6B-208ENST00000489500 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
TNRC6B-208ENST00000489500 DCBLD2Q96PD2 775 aa16.8■□□□□ 0.28
TNRC6B-208ENST00000489500 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
TNRC6B-208ENST00000489500 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
TNRC6B-208ENST00000489500 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
TNRC6B-208ENST00000489500 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
TNRC6B-208ENST00000489500 MS4A3Q96HJ5 214 aa16.72■□□□□ 0.27
TNRC6B-208ENST00000489500 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
TNRC6B-208ENST00000489500 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
TNRC6B-208ENST00000489500 NUBP1P53384 320 aa16.69■□□□□ 0.26
TNRC6B-208ENST00000489500 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
TNRC6B-208ENST00000489500 LHX8Q68G74 356 aa16.66■□□□□ 0.26
TNRC6B-208ENST00000489500 KIF12Q96FN5 646 aa16.66■□□□□ 0.26
TNRC6B-208ENST00000489500 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
TNRC6B-208ENST00000489500 CUX2O14529 1486 aa16.61■□□□□ 0.25
TNRC6B-208ENST00000489500 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
TNRC6B-208ENST00000489500 MAP3K13O43283 966 aa16.58■□□□□ 0.24
TNRC6B-208ENST00000489500 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.24
TNRC6B-208ENST00000489500 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
TNRC6B-208ENST00000489500 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
TNRC6B-208ENST00000489500 ATMINO43313 823 aaPredicted RBP16.51■□□□□ 0.23
TNRC6B-208ENST00000489500 ASTLQ6HA08 431 aaPredicted RBP16.51■□□□□ 0.23
TNRC6B-208ENST00000489500 NESP48681 1621 aa16.51■□□□□ 0.23
TNRC6B-208ENST00000489500 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
TNRC6B-208ENST00000489500 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
TNRC6B-208ENST00000489500 WIZO95785 1651 aa16.46■□□□□ 0.23
TNRC6B-208ENST00000489500 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
TNRC6B-208ENST00000489500 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
TNRC6B-208ENST00000489500 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
TNRC6B-208ENST00000489500 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
TNRC6B-208ENST00000489500 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
TNRC6B-208ENST00000489500 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
TNRC6B-208ENST00000489500 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
TNRC6B-208ENST00000489500 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
TNRC6B-208ENST00000489500 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
TNRC6B-208ENST00000489500 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
TNRC6B-208ENST00000489500 IFNLR1Q8IU57 520 aaPredicted RBP16.37■□□□□ 0.21
TNRC6B-208ENST00000489500 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
TNRC6B-208ENST00000489500 TIE1P35590 1138 aa16.36■□□□□ 0.21
TNRC6B-208ENST00000489500 IFNL1Q8IU54 200 aa16.36■□□□□ 0.21
TNRC6B-208ENST00000489500 METRNQ9UJH8 293 aa16.36■□□□□ 0.21
TNRC6B-208ENST00000489500 PYGBP11216 843 aa16.35■□□□□ 0.21
TNRC6B-208ENST00000489500 SLC39A7Q92504 469 aa16.34■□□□□ 0.21
TNRC6B-208ENST00000489500 C7P10643 843 aa16.32■□□□□ 0.2
TNRC6B-208ENST00000489500 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
TNRC6B-208ENST00000489500 TTLL13PA6NNM8 815 aa16.31■□□□□ 0.2
TNRC6B-208ENST00000489500 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
TNRC6B-208ENST00000489500 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
TNRC6B-208ENST00000489500 GSE1Q14687 1217 aa16.25■□□□□ 0.19
TNRC6B-208ENST00000489500 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
TNRC6B-208ENST00000489500 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
TNRC6B-208ENST00000489500 SPOCK2Q92563 424 aa16.23■□□□□ 0.19
TNRC6B-208ENST00000489500 POTEFA5A3E0 1075 aa16.22■□□□□ 0.19
TNRC6B-208ENST00000489500 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
TNRC6B-208ENST00000489500 PCDHB8Q9UN66 801 aa16.22■□□□□ 0.19
TNRC6B-208ENST00000489500 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
TNRC6B-208ENST00000489500 CFTRP13569 1480 aa16.2■□□□□ 0.18
TNRC6B-208ENST00000489500 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
TNRC6B-208ENST00000489500 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
TNRC6B-208ENST00000489500 WDR62O43379 1518 aa16.19■□□□□ 0.18
TNRC6B-208ENST00000489500 PRDM2Q13029 1718 aa16.17■□□□□ 0.18
TNRC6B-208ENST00000489500 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
TNRC6B-208ENST00000489500 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
TNRC6B-208ENST00000489500 CHRM1P11229 460 aaPredicted RBP16.12■□□□□ 0.17
TNRC6B-208ENST00000489500 SEC24BO95487 1268 aa16.08■□□□□ 0.16
TNRC6B-208ENST00000489500 IER5LQ5T953 404 aa16.07■□□□□ 0.16
TNRC6B-208ENST00000489500 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
TNRC6B-208ENST00000489500 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
TNRC6B-208ENST00000489500 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
TNRC6B-208ENST00000489500 MAMSTRQ6ZN01 415 aa15.99■□□□□ 0.15
TNRC6B-208ENST00000489500 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
TNRC6B-208ENST00000489500 IRX5P78411 483 aaPredicted RBP15.96■□□□□ 0.15
TNRC6B-208ENST00000489500 PSEN1P49768 467 aa15.95■□□□□ 0.14
TNRC6B-208ENST00000489500 SCUBE2Q9NQ36 999 aa15.94■□□□□ 0.14
TNRC6B-208ENST00000489500 PLCG2P16885 1265 aa15.93■□□□□ 0.14
TNRC6B-208ENST00000489500 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
TNRC6B-208ENST00000489500 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
TNRC6B-208ENST00000489500 PDAP1Q13442 181 aaKnown RBP15.88■□□□□ 0.13
TNRC6B-208ENST00000489500 OCEL1Q9H607 264 aa15.88■□□□□ 0.13
TNRC6B-208ENST00000489500 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
TNRC6B-208ENST00000489500 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
TNRC6B-208ENST00000489500 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
TNRC6B-208ENST00000489500 MKRN3Q13064 507 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms