RNA–Protein interactions for RNA: ENST00000488943.1

REPIN1-213, Transcript of replication initiator 1, human

TSL 5

Gene REPIN1, Length 1,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
REPIN1-213	ENST00000488943	NPM1	P06748	294 aa	Known RBP eCLIP	36.5	■■■■□ 3.43
REPIN1-213	ENST00000488943	FAM69C	Q0P6D2	419 aa		36.48	■■■■□ 3.43
REPIN1-213	ENST00000488943	ABCC10	Q5T3U5	1492 aa		36.43	■■■■□ 3.42
REPIN1-213	ENST00000488943	RUSC2	Q8N2Y8	1516 aa		36.39	■■■■□ 3.42
REPIN1-213	ENST00000488943	MAPKBP1	O60336	1514 aa		36.37	■■■■□ 3.41
REPIN1-213	ENST00000488943	DIP2B	Q9P265	1576 aa		36.32	■■■■□ 3.4
REPIN1-213	ENST00000488943	ADCY10	Q96PN6	1610 aa		36.27	■■■■□ 3.4
REPIN1-213	ENST00000488943	KDM6B	O15054	1643 aa		36.24	■■■■□ 3.39
REPIN1-213	ENST00000488943	TSPOAP1	O95153	1857 aa		36.16	■■■■□ 3.38
REPIN1-213	ENST00000488943	KIAA0586	Q9BVV6	1533 aa		36.14	■■■■□ 3.38
REPIN1-213	ENST00000488943	KDM4F	A0A1W2PPD8	638 aa		36.11	■■■■□ 3.37
REPIN1-213	ENST00000488943	CUL7	Q14999	1698 aa		36.03	■■■■□ 3.36
REPIN1-213	ENST00000488943	IGF1R	P08069	1367 aa		35.99	■■■■□ 3.35
REPIN1-213	ENST00000488943	KIF27	Q86VH2	1401 aa		35.98	■■■■□ 3.35
REPIN1-213	ENST00000488943	PTPRG	P23470	1445 aa		35.97	■■■■□ 3.35
REPIN1-213	ENST00000488943	TTBK1	Q5TCY1	1321 aa	Predicted RBP	35.96	■■■■□ 3.35
REPIN1-213	ENST00000488943	CARMIL2	Q6F5E8	1435 aa		35.87	■■■■□ 3.33
REPIN1-213	ENST00000488943	ABCC2	Q92887	1545 aa		35.85	■■■■□ 3.33
REPIN1-213	ENST00000488943	TNIK	Q9UKE5	1360 aa		35.84	■■■■□ 3.33
REPIN1-213	ENST00000488943	PLB1	Q6P1J6	1458 aa		35.81	■■■■□ 3.32
REPIN1-213	ENST00000488943	ASXL2	Q76L83	1435 aa		35.81	■■■■□ 3.32
REPIN1-213	ENST00000488943	CARMIL1	Q5VZK9	1371 aa		35.78	■■■■□ 3.32
REPIN1-213	ENST00000488943	GLI2	P10070	1586 aa		35.77	■■■■□ 3.32
REPIN1-213	ENST00000488943	ILDR1	Q86SU0	546 aa	Predicted RBP	35.75	■■■■□ 3.31
REPIN1-213	ENST00000488943	PPRC1	Q5VV67	1664 aa	Known RBP	35.75	■■■■□ 3.31
REPIN1-213	ENST00000488943	IQGAP2	Q13576	1575 aa		35.72	■■■■□ 3.31
REPIN1-213	ENST00000488943	ADGRL1	O94910	1474 aa		35.71	■■■■□ 3.31
REPIN1-213	ENST00000488943	UHRF1BP1L	A0JNW5	1464 aa		35.69	■■■■□ 3.3
REPIN1-213	ENST00000488943	UACA	Q9BZF9	1416 aa		35.66	■■■■□ 3.3
REPIN1-213	ENST00000488943	EPRS	P07814	1512 aa	Known RBP	35.57	■■■■□ 3.29
REPIN1-213	ENST00000488943	TEX14	Q8IWB6	1497 aa		35.57	■■■■□ 3.28
REPIN1-213	ENST00000488943	MAP3K4	Q9Y6R4	1608 aa		35.57	■■■■□ 3.28
REPIN1-213	ENST00000488943	DISP1	Q96F81	1524 aa		35.55	■■■■□ 3.28
REPIN1-213	ENST00000488943	KDM5B	Q9UGL1	1544 aa		35.53	■■■■□ 3.28
REPIN1-213	ENST00000488943	COL17A1	Q9UMD9	1497 aa	Predicted RBP	35.53	■■■■□ 3.28
REPIN1-213	ENST00000488943	ZCCHC11	Q5TAX3	1644 aa	Known RBP	35.5	■■■■□ 3.27
REPIN1-213	ENST00000488943	HECW2	Q9P2P5	1572 aa		35.44	■■■■□ 3.26
REPIN1-213	ENST00000488943	UGGT2	Q9NYU1	1516 aa		35.43	■■■■□ 3.26
REPIN1-213	ENST00000488943	KIAA0556	O60303	1618 aa		35.39	■■■■□ 3.26
REPIN1-213	ENST00000488943	RAPGEF2	Q9Y4G8	1499 aa		35.39	■■■■□ 3.26
REPIN1-213	ENST00000488943	WDR7	Q9Y4E6	1490 aa		35.35	■■■■□ 3.25
REPIN1-213	ENST00000488943	CD109	Q6YHK3	1445 aa		35.23	■■■■□ 3.23
REPIN1-213	ENST00000488943	CFAP43	Q8NDM7	1665 aa		35.22	■■■■□ 3.23
REPIN1-213	ENST00000488943	MAGI3	Q5TCQ9	1506 aa		35.2	■■■■□ 3.23
REPIN1-213	ENST00000488943	KCNH8	Q96L42	1107 aa		35.19	■■■■□ 3.22
REPIN1-213	ENST00000488943	CTTNBP2	Q8WZ74	1663 aa		35.17	■■■■□ 3.22
REPIN1-213	ENST00000488943	GOLGA3	Q08378	1498 aa		35.16	■■■■□ 3.22
REPIN1-213	ENST00000488943	ABCA8	O94911	1581 aa		35.08	■■■■□ 3.21
REPIN1-213	ENST00000488943	KIF21B	O75037	1637 aa		35.06	■■■■□ 3.2
REPIN1-213	ENST00000488943	FAM9A	Q8IZU1	332 aa	Predicted RBP	34.99	■■■■□ 3.19
REPIN1-213	ENST00000488943	ARAP3	Q8WWN8	1544 aa		34.94	■■■■□ 3.18
REPIN1-213	ENST00000488943	FBXO41	Q8TF61	875 aa		34.89	■■■■□ 3.18
REPIN1-213	ENST00000488943	ARID3C	A6NKF2	412 aa		34.88	■■■■□ 3.17
REPIN1-213	ENST00000488943	PHLDB1	Q86UU1	1377 aa		34.83	■■■■□ 3.17
REPIN1-213	ENST00000488943	PTPRM	P28827	1452 aa		34.81	■■■■□ 3.16
REPIN1-213	ENST00000488943	ATP10B	O94823	1461 aa		34.79	■■■■□ 3.16
REPIN1-213	ENST00000488943	ADAMTSL3	P82987	1691 aa		34.79	■■■■□ 3.16
REPIN1-213	ENST00000488943	PRX	Q9BXM0	1461 aa		34.78	■■■■□ 3.16
REPIN1-213	ENST00000488943	ABCA9	Q8IUA7	1624 aa		34.78	■■■■□ 3.16
REPIN1-213	ENST00000488943	P3H3	Q8IVL6	736 aa		34.77	■■■■□ 3.16
REPIN1-213	ENST00000488943	RAPGEF3	O95398	923 aa		34.73	■■■■□ 3.15
REPIN1-213	ENST00000488943	ARID4B	Q4LE39	1312 aa	Predicted RBP	34.7	■■■■□ 3.15
REPIN1-213	ENST00000488943	NEO1	Q92859	1461 aa		34.7	■■■■□ 3.15
REPIN1-213	ENST00000488943	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	34.68	■■■■□ 3.14
REPIN1-213	ENST00000488943	HNRNPUL2	Q1KMD3	747 aa	Known RBP	34.68	■■■■□ 3.14
REPIN1-213	ENST00000488943	BCORL1	Q5H9F3	1711 aa		34.67	■■■■□ 3.14
REPIN1-213	ENST00000488943	RAPGEF6	Q8TEU7	1601 aa		34.63	■■■■□ 3.13
REPIN1-213	ENST00000488943	MADD	Q8WXG6	1647 aa		34.63	■■■■□ 3.13
REPIN1-213	ENST00000488943	PCF11	O94913	1555 aa	Known RBP	34.62	■■■■□ 3.13
REPIN1-213	ENST00000488943	FRMPD1	Q5SYB0	1578 aa		34.57	■■■■□ 3.13
REPIN1-213	ENST00000488943	SAMD9	Q5K651	1589 aa		34.57	■■■■□ 3.12
REPIN1-213	ENST00000488943	LMTK3	Q96Q04	1460 aa		34.53	■■■■□ 3.12
REPIN1-213	ENST00000488943	RIMS1	Q86UR5	1692 aa	Known RBP	34.5	■■■■□ 3.11
REPIN1-213	ENST00000488943	ARHGEF40	Q8TER5	1519 aa		34.49	■■■■□ 3.11
REPIN1-213	ENST00000488943	DENND4B	O75064	1496 aa	Predicted RBP	34.46	■■■■□ 3.11
REPIN1-213	ENST00000488943	NUP153	P49790	1475 aa	Known RBP	34.45	■■■■□ 3.1
REPIN1-213	ENST00000488943	RICTOR	Q6R327	1708 aa		34.42	■■■■□ 3.1
REPIN1-213	ENST00000488943	PLEKHD1	A6NEE1	506 aa		34.42	■■■■□ 3.1
REPIN1-213	ENST00000488943	CFAP74	Q9C0B2	1584 aa		34.41	■■■■□ 3.1
REPIN1-213	ENST00000488943	PLPPR3	Q6T4P5	718 aa		34.41	■■■■□ 3.1
REPIN1-213	ENST00000488943	POGZ	Q7Z3K3	1410 aa		34.4	■■■■□ 3.1
REPIN1-213	ENST00000488943	CSRNP3	Q8WYN3	585 aa		34.4	■■■■□ 3.1
REPIN1-213	ENST00000488943	AKNA	Q7Z591	1439 aa		34.39	■■■■□ 3.1
REPIN1-213	ENST00000488943	RANGAP1	P46060	587 aa	Predicted RBP	34.39	■■■■□ 3.1
REPIN1-213	ENST00000488943	FANCA	O15360	1455 aa		34.38	■■■■□ 3.09
REPIN1-213	ENST00000488943	HSPA2	P54652	639 aa		34.36	■■■■□ 3.09
REPIN1-213	ENST00000488943	FHOD3	Q2V2M9	1422 aa		34.36	■■■■□ 3.09
REPIN1-213	ENST00000488943	EFCAB5	A4FU69	1503 aa		34.3	■■■■□ 3.08
REPIN1-213	ENST00000488943	ZFYVE16	Q7Z3T8	1539 aa		34.3	■■■■□ 3.08
REPIN1-213	ENST00000488943	ZMYM4	Q5VZL5	1548 aa		34.29	■■■■□ 3.08
REPIN1-213	ENST00000488943	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	34.29	■■■■□ 3.08	4e-7	■■■□□ 17.5
REPIN1-213	ENST00000488943	MLEC	Q14165	292 aa		34.24	■■■■□ 3.07
REPIN1-213	ENST00000488943	TTC37	Q6PGP7	1564 aa		34.23	■■■■□ 3.07
REPIN1-213	ENST00000488943	MAGI2	Q86UL8	1455 aa		34.23	■■■■□ 3.07
REPIN1-213	ENST00000488943	YEATS2	Q9ULM3	1422 aa		34.22	■■■■□ 3.07
REPIN1-213	ENST00000488943	CERK	Q8TCT0	537 aa		34.22	■■■■□ 3.07
REPIN1-213	ENST00000488943	FER1L4	A9Z1Z3	1794 aa		34.21	■■■■□ 3.07
REPIN1-213	ENST00000488943	SIGLEC1	Q9BZZ2	1709 aa		34.19	■■■■□ 3.06
REPIN1-213	ENST00000488943	HECW1	Q76N89	1606 aa		34.17	■■■■□ 3.06
REPIN1-213	ENST00000488943	EEA1	Q15075	1411 aa		34.13	■■■■□ 3.05

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms