RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
NECAB3-213ENST00000488489 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
NECAB3-213ENST00000488489 CTTNBP2Q8WZ74 1663 aa31.48■■■□□ 2.63
NECAB3-213ENST00000488489 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
NECAB3-213ENST00000488489 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
NECAB3-213ENST00000488489 P3H3Q8IVL6 736 aa31.33■■■□□ 2.61
NECAB3-213ENST00000488489 APLP2Q06481 763 aa31.31■■■□□ 2.6
NECAB3-213ENST00000488489 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
NECAB3-213ENST00000488489 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.6
NECAB3-213ENST00000488489 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
NECAB3-213ENST00000488489 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
NECAB3-213ENST00000488489 SAMD9Q5K651 1589 aa31.19■■■□□ 2.58
NECAB3-213ENST00000488489 SYNJ2O15056 1496 aa31.18■■■□□ 2.58
NECAB3-213ENST00000488489 IQGAP2Q13576 1575 aa31.17■■■□□ 2.58
NECAB3-213ENST00000488489 KANK4Q5T7N3 995 aaPredicted RBP31.15■■■□□ 2.58
NECAB3-213ENST00000488489 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
NECAB3-213ENST00000488489 FBLN2P98095 1184 aa31.09■■■□□ 2.57
NECAB3-213ENST00000488489 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
NECAB3-213ENST00000488489 KIAA0586Q9BVV6 1533 aa31.09■■■□□ 2.57
NECAB3-213ENST00000488489 FMN1Q68DA7 1419 aa31.04■■■□□ 2.56
NECAB3-213ENST00000488489 CEP170Q5SW79 1584 aa31.04■■■□□ 2.56
NECAB3-213ENST00000488489 CASKIN1Q8WXD9 1431 aa31.02■■■□□ 2.56
NECAB3-213ENST00000488489 UGGT2Q9NYU1 1516 aa31.02■■■□□ 2.56
NECAB3-213ENST00000488489 TIAM1Q13009 1591 aa31.01■■■□□ 2.56
NECAB3-213ENST00000488489 MAP3K1Q13233 1512 aa31.01■■■□□ 2.55
NECAB3-213ENST00000488489 FYCO1Q9BQS8 1478 aa31■■■□□ 2.55
NECAB3-213ENST00000488489 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
NECAB3-213ENST00000488489 NUP160Q12769 1436 aa30.97■■■□□ 2.55
NECAB3-213ENST00000488489 DISP1Q96F81 1524 aa30.91■■■□□ 2.54
NECAB3-213ENST00000488489 CFAP43Q8NDM7 1665 aa30.9■■■□□ 2.54
NECAB3-213ENST00000488489 LRRC9Q6ZRR7 1453 aa30.89■■■□□ 2.54
NECAB3-213ENST00000488489 KIAA0556O60303 1618 aa30.86■■■□□ 2.53
NECAB3-213ENST00000488489 LRRIQ1Q96JM4 1722 aa30.82■■■□□ 2.52
NECAB3-213ENST00000488489 CHD1O14646 1710 aa30.81■■■□□ 2.52
NECAB3-213ENST00000488489 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
NECAB3-213ENST00000488489 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
NECAB3-213ENST00000488489 HNRNPUL2Q1KMD3 747 aaKnown RBP30.71■■■□□ 2.51
NECAB3-213ENST00000488489 HECW1Q76N89 1606 aa30.68■■■□□ 2.5
NECAB3-213ENST00000488489 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
NECAB3-213ENST00000488489 CARMIL2Q6F5E8 1435 aa30.66■■■□□ 2.5
NECAB3-213ENST00000488489 CCNB3Q8WWL7 1395 aa30.63■■■□□ 2.49
NECAB3-213ENST00000488489 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
NECAB3-213ENST00000488489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.63■■■□□ 2.49
NECAB3-213ENST00000488489 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
NECAB3-213ENST00000488489 MTUS2Q5JR59 1369 aa30.62■■■□□ 2.49
NECAB3-213ENST00000488489 CDK13Q14004 1512 aaKnown RBP30.58■■■□□ 2.49
NECAB3-213ENST00000488489 MAGI3Q5TCQ9 1506 aa30.58■■■□□ 2.49
NECAB3-213ENST00000488489 ARID3CA6NKF2 412 aa30.58■■■□□ 2.49
NECAB3-213ENST00000488489 RAPGEF6Q8TEU7 1601 aa30.57■■■□□ 2.48
NECAB3-213ENST00000488489 PRG4Q92954 1404 aaPredicted RBP30.56■■■□□ 2.48
NECAB3-213ENST00000488489 NUP153P49790 1475 aaKnown RBP30.56■■■□□ 2.48
NECAB3-213ENST00000488489 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
NECAB3-213ENST00000488489 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.48
NECAB3-213ENST00000488489 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
NECAB3-213ENST00000488489 NCOA2Q15596 1464 aa30.48■■■□□ 2.47
NECAB3-213ENST00000488489 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
NECAB3-213ENST00000488489 SUPT6HQ7KZ85 1726 aaKnown RBP30.45■■■□□ 2.47
NECAB3-213ENST00000488489 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
NECAB3-213ENST00000488489 ZEB1P37275 1124 aaPredicted RBP30.43■■■□□ 2.46
NECAB3-213ENST00000488489 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
NECAB3-213ENST00000488489 ITGAEP38570 1179 aa30.41■■■□□ 2.46
NECAB3-213ENST00000488489 ABCA8O94911 1581 aa30.4■■■□□ 2.46
NECAB3-213ENST00000488489 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
NECAB3-213ENST00000488489 FGD6Q6ZV73 1430 aa30.39■■■□□ 2.46
NECAB3-213ENST00000488489 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.45
NECAB3-213ENST00000488489 PTPRGP23470 1445 aa30.39■■■□□ 2.45
NECAB3-213ENST00000488489 MYOM3Q5VTT5 1437 aa30.35■■■□□ 2.45
NECAB3-213ENST00000488489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.32■■■□□ 2.445e-7■■■■■ 29.7
NECAB3-213ENST00000488489 CDK11AQ9UQ88 783 aaPredicted RBP30.29■■■□□ 2.44
NECAB3-213ENST00000488489 ATP10BO94823 1461 aa30.26■■■□□ 2.43
NECAB3-213ENST00000488489 TROQ12816 1431 aaPredicted RBP30.23■■■□□ 2.43
NECAB3-213ENST00000488489 UACAQ9BZF9 1416 aa30.2■■■□□ 2.43
NECAB3-213ENST00000488489 PTPN23Q9H3S7 1636 aa30.2■■■□□ 2.42
NECAB3-213ENST00000488489 MIA2Q96PC5 1412 aa30.14■■■□□ 2.42
NECAB3-213ENST00000488489 TCOF1Q13428 1488 aaKnown RBP30.13■■■□□ 2.41
NECAB3-213ENST00000488489 PTPRKQ15262 1439 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 KIF14Q15058 1648 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 PLEKHD1A6NEE1 506 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 ADCY10Q96PN6 1610 aa30.11■■■□□ 2.41
NECAB3-213ENST00000488489 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
NECAB3-213ENST00000488489 RAB3GAP2Q9H2M9 1393 aa30.1■■■□□ 2.41
NECAB3-213ENST00000488489 SETD5Q9C0A6 1442 aa30.1■■■□□ 2.41
NECAB3-213ENST00000488489 ABCC2Q92887 1545 aa30.09■■■□□ 2.41
NECAB3-213ENST00000488489 DHX57Q6P158 1386 aaKnown RBP30.08■■■□□ 2.41
NECAB3-213ENST00000488489 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
NECAB3-213ENST00000488489 ZNF644Q9H582 1327 aaPredicted RBP30.01■■■□□ 2.39
NECAB3-213ENST00000488489 ABCC10Q5T3U5 1492 aa29.99■■■□□ 2.39
NECAB3-213ENST00000488489 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
NECAB3-213ENST00000488489 CFDP1Q9UEE9 299 aaPredicted RBP29.95■■■□□ 2.39
NECAB3-213ENST00000488489 ITSN2Q9NZM3 1697 aa29.95■■■□□ 2.39
NECAB3-213ENST00000488489 HFM1A2PYH4 1435 aa29.94■■■□□ 2.38
NECAB3-213ENST00000488489 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
NECAB3-213ENST00000488489 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 ZCCHC11Q5TAX3 1644 aaKnown RBP29.89■■■□□ 2.38
NECAB3-213ENST00000488489 NAIPQ13075 1403 aa29.89■■■□□ 2.38
NECAB3-213ENST00000488489 CAMSAP2Q08AD1 1489 aa29.88■■■□□ 2.37
NECAB3-213ENST00000488489 DAPK1P53355 1430 aa29.86■■■□□ 2.37
NECAB3-213ENST00000488489 ABCC5O15440 1437 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms