RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
RAPGEF3-211ENST00000488250 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
RAPGEF3-211ENST00000488250 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF3-211ENST00000488250 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
RAPGEF3-211ENST00000488250 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
RAPGEF3-211ENST00000488250 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
RAPGEF3-211ENST00000488250 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
RAPGEF3-211ENST00000488250 AQRO60306 1485 aaKnown RBP eCLIP24.22■■□□□ 1.47
RAPGEF3-211ENST00000488250 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
RAPGEF3-211ENST00000488250 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
RAPGEF3-211ENST00000488250 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
RAPGEF3-211ENST00000488250 FYCO1Q9BQS8 1478 aa24.17■■□□□ 1.46
RAPGEF3-211ENST00000488250 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
RAPGEF3-211ENST00000488250 FHOD3Q2V2M9 1422 aa24.17■■□□□ 1.46
RAPGEF3-211ENST00000488250 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
RAPGEF3-211ENST00000488250 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
RAPGEF3-211ENST00000488250 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
RAPGEF3-211ENST00000488250 HNRNPUL2Q1KMD3 747 aaKnown RBP24.14■■□□□ 1.45
RAPGEF3-211ENST00000488250 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
RAPGEF3-211ENST00000488250 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
RAPGEF3-211ENST00000488250 P3H3Q8IVL6 736 aa24.09■■□□□ 1.45
RAPGEF3-211ENST00000488250 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.44
RAPGEF3-211ENST00000488250 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
RAPGEF3-211ENST00000488250 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
RAPGEF3-211ENST00000488250 IQGAP2Q13576 1575 aa24.01■■□□□ 1.43
RAPGEF3-211ENST00000488250 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
RAPGEF3-211ENST00000488250 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
RAPGEF3-211ENST00000488250 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
RAPGEF3-211ENST00000488250 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
RAPGEF3-211ENST00000488250 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
RAPGEF3-211ENST00000488250 GRIN2AQ12879 1464 aa23.89■■□□□ 1.41
RAPGEF3-211ENST00000488250 ATP1B4Q9UN42 357 aaPredicted RBP23.88■■□□□ 1.41
RAPGEF3-211ENST00000488250 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
RAPGEF3-211ENST00000488250 LRRIQ1Q96JM4 1722 aa23.87■■□□□ 1.41
RAPGEF3-211ENST00000488250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
RAPGEF3-211ENST00000488250 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
RAPGEF3-211ENST00000488250 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
RAPGEF3-211ENST00000488250 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
RAPGEF3-211ENST00000488250 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
RAPGEF3-211ENST00000488250 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
RAPGEF3-211ENST00000488250 EHBP1L1Q8N3D4 1523 aa23.78■■□□□ 1.4
RAPGEF3-211ENST00000488250 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
RAPGEF3-211ENST00000488250 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
RAPGEF3-211ENST00000488250 FGD6Q6ZV73 1430 aa23.73■■□□□ 1.39
RAPGEF3-211ENST00000488250 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
RAPGEF3-211ENST00000488250 ARHGEF11O15085 1522 aa23.72■■□□□ 1.39
RAPGEF3-211ENST00000488250 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
RAPGEF3-211ENST00000488250 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
RAPGEF3-211ENST00000488250 EPRSP07814 1512 aaKnown RBP23.71■■□□□ 1.39
RAPGEF3-211ENST00000488250 NUP160Q12769 1436 aa23.7■■□□□ 1.39
RAPGEF3-211ENST00000488250 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
RAPGEF3-211ENST00000488250 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
RAPGEF3-211ENST00000488250 ITGAEP38570 1179 aa23.69■■□□□ 1.38
RAPGEF3-211ENST00000488250 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
RAPGEF3-211ENST00000488250 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
RAPGEF3-211ENST00000488250 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
RAPGEF3-211ENST00000488250 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
RAPGEF3-211ENST00000488250 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
RAPGEF3-211ENST00000488250 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
RAPGEF3-211ENST00000488250 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
RAPGEF3-211ENST00000488250 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
RAPGEF3-211ENST00000488250 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
RAPGEF3-211ENST00000488250 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
RAPGEF3-211ENST00000488250 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
RAPGEF3-211ENST00000488250 FBLN2P98095 1184 aa23.53■■□□□ 1.36
RAPGEF3-211ENST00000488250 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
RAPGEF3-211ENST00000488250 MIA2Q96PC5 1412 aa23.52■■□□□ 1.36
RAPGEF3-211ENST00000488250 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
RAPGEF3-211ENST00000488250 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
RAPGEF3-211ENST00000488250 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
RAPGEF3-211ENST00000488250 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
RAPGEF3-211ENST00000488250 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
RAPGEF3-211ENST00000488250 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
RAPGEF3-211ENST00000488250 NAIPQ13075 1403 aa23.4■■□□□ 1.34
RAPGEF3-211ENST00000488250 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
RAPGEF3-211ENST00000488250 ABCA8O94911 1581 aa23.39■■□□□ 1.34
RAPGEF3-211ENST00000488250 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.34
RAPGEF3-211ENST00000488250 CHD1O14646 1710 aa23.36■■□□□ 1.33
RAPGEF3-211ENST00000488250 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
RAPGEF3-211ENST00000488250 ADCY10Q96PN6 1610 aa23.36■■□□□ 1.33
RAPGEF3-211ENST00000488250 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
RAPGEF3-211ENST00000488250 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
RAPGEF3-211ENST00000488250 TIMELESSQ9UNS1 1208 aa23.31■■□□□ 1.32
RAPGEF3-211ENST00000488250 PRG4Q92954 1404 aaPredicted RBP23.31■■□□□ 1.32
RAPGEF3-211ENST00000488250 SHROOM2Q13796 1616 aa23.31■■□□□ 1.32
RAPGEF3-211ENST00000488250 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
RAPGEF3-211ENST00000488250 DNMT1P26358 1616 aaKnown RBP23.27■■□□□ 1.32
RAPGEF3-211ENST00000488250 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
RAPGEF3-211ENST00000488250 ATP10BO94823 1461 aa23.26■■□□□ 1.31
RAPGEF3-211ENST00000488250 DAPK1P53355 1430 aa23.25■■□□□ 1.31
RAPGEF3-211ENST00000488250 PTPRGP23470 1445 aa23.24■■□□□ 1.31
RAPGEF3-211ENST00000488250 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
RAPGEF3-211ENST00000488250 KIF14Q15058 1648 aa23.23■■□□□ 1.31
RAPGEF3-211ENST00000488250 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
RAPGEF3-211ENST00000488250 ABCC5O15440 1437 aa23.21■■□□□ 1.31
RAPGEF3-211ENST00000488250 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
RAPGEF3-211ENST00000488250 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
RAPGEF3-211ENST00000488250 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
RAPGEF3-211ENST00000488250 RRP7BPQ9NSQ0 103 aa23.18■■□□□ 1.3
RAPGEF3-211ENST00000488250 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms