RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
TNFSF4-203ENST00000488053 NUBP1P53384 320 aa12.89□□□□□ -0.35
TNFSF4-203ENST00000488053 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
TNFSF4-203ENST00000488053 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
TNFSF4-203ENST00000488053 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
TNFSF4-203ENST00000488053 GSE1Q14687 1217 aa12.83□□□□□ -0.36
TNFSF4-203ENST00000488053 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
TNFSF4-203ENST00000488053 CECR2Q9BXF3 1484 aa12.82□□□□□ -0.36
TNFSF4-203ENST00000488053 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
TNFSF4-203ENST00000488053 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
TNFSF4-203ENST00000488053 PKD2Q13563 968 aa12.79□□□□□ -0.36
TNFSF4-203ENST00000488053 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
TNFSF4-203ENST00000488053 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
TNFSF4-203ENST00000488053 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
TNFSF4-203ENST00000488053 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
TNFSF4-203ENST00000488053 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
TNFSF4-203ENST00000488053 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
TNFSF4-203ENST00000488053 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
TNFSF4-203ENST00000488053 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
TNFSF4-203ENST00000488053 POTEHQ6S545 545 aa12.64□□□□□ -0.39
TNFSF4-203ENST00000488053 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
TNFSF4-203ENST00000488053 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
TNFSF4-203ENST00000488053 HAX1O00165 279 aa12.59□□□□□ -0.39
TNFSF4-203ENST00000488053 PYGBP11216 843 aa12.58□□□□□ -0.4
TNFSF4-203ENST00000488053 RGL2O15211 777 aa12.56□□□□□ -0.4
TNFSF4-203ENST00000488053 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
TNFSF4-203ENST00000488053 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
TNFSF4-203ENST00000488053 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
TNFSF4-203ENST00000488053 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
TNFSF4-203ENST00000488053 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
TNFSF4-203ENST00000488053 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
TNFSF4-203ENST00000488053 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
TNFSF4-203ENST00000488053 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
TNFSF4-203ENST00000488053 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
TNFSF4-203ENST00000488053 MAP3K13O43283 966 aa12.45□□□□□ -0.42
TNFSF4-203ENST00000488053 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
TNFSF4-203ENST00000488053 CLCN6P51797 869 aa12.43□□□□□ -0.42
TNFSF4-203ENST00000488053 EVX2Q03828 476 aa12.42□□□□□ -0.42
TNFSF4-203ENST00000488053 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
TNFSF4-203ENST00000488053 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
TNFSF4-203ENST00000488053 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
TNFSF4-203ENST00000488053 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
TNFSF4-203ENST00000488053 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
TNFSF4-203ENST00000488053 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
TNFSF4-203ENST00000488053 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
TNFSF4-203ENST00000488053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
TNFSF4-203ENST00000488053 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
TNFSF4-203ENST00000488053 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
TNFSF4-203ENST00000488053 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
TNFSF4-203ENST00000488053 STK25O00506 426 aa12.32□□□□□ -0.44
TNFSF4-203ENST00000488053 PSEN1P49768 467 aa12.32□□□□□ -0.44
TNFSF4-203ENST00000488053 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
TNFSF4-203ENST00000488053 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
TNFSF4-203ENST00000488053 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
TNFSF4-203ENST00000488053 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
TNFSF4-203ENST00000488053 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
TNFSF4-203ENST00000488053 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
TNFSF4-203ENST00000488053 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
TNFSF4-203ENST00000488053 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
TNFSF4-203ENST00000488053 GABBR2O75899 941 aa12.24□□□□□ -0.45
TNFSF4-203ENST00000488053 NESP48681 1621 aa12.24□□□□□ -0.45
TNFSF4-203ENST00000488053 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
TNFSF4-203ENST00000488053 CUX2O14529 1486 aa12.23□□□□□ -0.45
TNFSF4-203ENST00000488053 TIE1P35590 1138 aa12.23□□□□□ -0.45
TNFSF4-203ENST00000488053 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
TNFSF4-203ENST00000488053 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
TNFSF4-203ENST00000488053 BAZ1BQ9UIG0 1483 aaKnown RBP12.22□□□□□ -0.45
TNFSF4-203ENST00000488053 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
TNFSF4-203ENST00000488053 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
TNFSF4-203ENST00000488053 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
TNFSF4-203ENST00000488053 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
TNFSF4-203ENST00000488053 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
TNFSF4-203ENST00000488053 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
TNFSF4-203ENST00000488053 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
TNFSF4-203ENST00000488053 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
TNFSF4-203ENST00000488053 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
TNFSF4-203ENST00000488053 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
TNFSF4-203ENST00000488053 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
TNFSF4-203ENST00000488053 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
TNFSF4-203ENST00000488053 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
TNFSF4-203ENST00000488053 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
TNFSF4-203ENST00000488053 SOX12O15370 315 aa12.08□□□□□ -0.48
TNFSF4-203ENST00000488053 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
TNFSF4-203ENST00000488053 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
TNFSF4-203ENST00000488053 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
TNFSF4-203ENST00000488053 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
TNFSF4-203ENST00000488053 WIZO95785 1651 aa12.06□□□□□ -0.48
TNFSF4-203ENST00000488053 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
TNFSF4-203ENST00000488053 NLRP6P59044 892 aa12.03□□□□□ -0.48
TNFSF4-203ENST00000488053 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
TNFSF4-203ENST00000488053 IER5LQ5T953 404 aa12.02□□□□□ -0.49
TNFSF4-203ENST00000488053 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
TNFSF4-203ENST00000488053 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
TNFSF4-203ENST00000488053 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
TNFSF4-203ENST00000488053 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms