RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
PHF1-209ENST00000487667 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
PHF1-209ENST00000487667 EFCAB5A4FU69 1503 aa31.54■■■□□ 2.64
PHF1-209ENST00000487667 PPARGC1BQ86YN6 1023 aaKnown RBP31.43■■■□□ 2.62
PHF1-209ENST00000487667 MAGI1Q96QZ7 1491 aaPredicted RBP31.42■■■□□ 2.62
PHF1-209ENST00000487667 SNAPC4Q5SXM2 1469 aa31.39■■■□□ 2.61
PHF1-209ENST00000487667 MAP3K1Q13233 1512 aa31.31■■■□□ 2.6
PHF1-209ENST00000487667 SAMD9Q5K651 1589 aa31.3■■■□□ 2.6
PHF1-209ENST00000487667 IQGAP2Q13576 1575 aa31.27■■■□□ 2.6
PHF1-209ENST00000487667 FMN1Q68DA7 1419 aa31.27■■■□□ 2.6
PHF1-209ENST00000487667 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
PHF1-209ENST00000487667 GRIN2AQ12879 1464 aa31.26■■■□□ 2.59
PHF1-209ENST00000487667 CHMP7Q8WUX9 453 aaPredicted RBP31.26■■■□□ 2.59
PHF1-209ENST00000487667 FBLN2P98095 1184 aa31.25■■■□□ 2.59
PHF1-209ENST00000487667 FHOD3Q2V2M9 1422 aa31.21■■■□□ 2.59
PHF1-209ENST00000487667 KIAA0586Q9BVV6 1533 aa31.2■■■□□ 2.59
PHF1-209ENST00000487667 FYCO1Q9BQS8 1478 aa31.19■■■□□ 2.58
PHF1-209ENST00000487667 CASKIN1Q8WXD9 1431 aa31.17■■■□□ 2.58
PHF1-209ENST00000487667 HRCP23327 699 aa31.16■■■□□ 2.58
PHF1-209ENST00000487667 TTBK1Q5TCY1 1321 aaPredicted RBP31.15■■■□□ 2.58
PHF1-209ENST00000487667 UGGT2Q9NYU1 1516 aa31.15■■■□□ 2.58
PHF1-209ENST00000487667 P3H3Q8IVL6 736 aa31.14■■■□□ 2.57
PHF1-209ENST00000487667 TIAM1Q13009 1591 aa31.13■■■□□ 2.57
PHF1-209ENST00000487667 PCF11O94913 1555 aaKnown RBP31.12■■■□□ 2.57
PHF1-209ENST00000487667 CFAP43Q8NDM7 1665 aa31.06■■■□□ 2.56
PHF1-209ENST00000487667 NUP160Q12769 1436 aa31.04■■■□□ 2.56
PHF1-209ENST00000487667 KANK4Q5T7N3 995 aaPredicted RBP31.02■■■□□ 2.56
PHF1-209ENST00000487667 LRRC9Q6ZRR7 1453 aa30.99■■■□□ 2.55
PHF1-209ENST00000487667 CEP170Q5SW79 1584 aa30.99■■■□□ 2.55
PHF1-209ENST00000487667 KIAA0556O60303 1618 aa30.93■■■□□ 2.54
PHF1-209ENST00000487667 CHD1O14646 1710 aa30.93■■■□□ 2.54
PHF1-209ENST00000487667 ZEB1P37275 1124 aaPredicted RBP30.92■■■□□ 2.54
PHF1-209ENST00000487667 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
PHF1-209ENST00000487667 RRBP1Q9P2E9 1410 aaKnown RBP30.89■■■□□ 2.54
PHF1-209ENST00000487667 DISP1Q96F81 1524 aa30.89■■■□□ 2.54
PHF1-209ENST00000487667 CCDC18Q5T9S5 1454 aa30.89■■■□□ 2.54
PHF1-209ENST00000487667 HECW1Q76N89 1606 aa30.87■■■□□ 2.53
PHF1-209ENST00000487667 CARMIL2Q6F5E8 1435 aa30.86■■■□□ 2.53
PHF1-209ENST00000487667 JPH4Q96JJ6 628 aa30.79■■■□□ 2.52
PHF1-209ENST00000487667 CCNB3Q8WWL7 1395 aa30.77■■■□□ 2.52
PHF1-209ENST00000487667 MTUS2Q5JR59 1369 aa30.74■■■□□ 2.51
PHF1-209ENST00000487667 EHBP1L1Q8N3D4 1523 aa30.72■■■□□ 2.51
PHF1-209ENST00000487667 LRRIQ1Q96JM4 1722 aa30.71■■■□□ 2.51
PHF1-209ENST00000487667 EPRSP07814 1512 aaKnown RBP30.69■■■□□ 2.5
PHF1-209ENST00000487667 RAPGEF6Q8TEU7 1601 aa30.67■■■□□ 2.5
PHF1-209ENST00000487667 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
PHF1-209ENST00000487667 PHLDB1Q86UU1 1377 aa30.64■■■□□ 2.5
PHF1-209ENST00000487667 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
PHF1-209ENST00000487667 SUPT6HQ7KZ85 1726 aaKnown RBP30.63■■■□□ 2.49
PHF1-209ENST00000487667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.63■■■□□ 2.494e-7■■■■■ 31.7
PHF1-209ENST00000487667 CCER1Q8TC90 406 aaPredicted RBP30.61■■■□□ 2.49
PHF1-209ENST00000487667 CLASP1Q7Z460 1538 aa30.58■■■□□ 2.49
PHF1-209ENST00000487667 PRG4Q92954 1404 aaPredicted RBP30.58■■■□□ 2.49
PHF1-209ENST00000487667 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
PHF1-209ENST00000487667 CDK11AQ9UQ88 783 aaPredicted RBP30.56■■■□□ 2.48
PHF1-209ENST00000487667 NUP153P49790 1475 aaKnown RBP30.56■■■□□ 2.48
PHF1-209ENST00000487667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.55■■■□□ 2.48
PHF1-209ENST00000487667 NCOA2Q15596 1464 aa30.54■■■□□ 2.48
PHF1-209ENST00000487667 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
PHF1-209ENST00000487667 CDK13Q14004 1512 aaKnown RBP30.5■■■□□ 2.47
PHF1-209ENST00000487667 FGD6Q6ZV73 1430 aa30.49■■■□□ 2.47
PHF1-209ENST00000487667 MYOM3Q5VTT5 1437 aa30.48■■■□□ 2.47
PHF1-209ENST00000487667 MAGI3Q5TCQ9 1506 aa30.48■■■□□ 2.47
PHF1-209ENST00000487667 ABCA8O94911 1581 aa30.47■■■□□ 2.47
PHF1-209ENST00000487667 PLB1Q6P1J6 1458 aa30.46■■■□□ 2.47
PHF1-209ENST00000487667 PTPRGP23470 1445 aa30.44■■■□□ 2.46
PHF1-209ENST00000487667 FAM50AQ14320 339 aaKnown RBP30.41■■■□□ 2.46
PHF1-209ENST00000487667 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.45
PHF1-209ENST00000487667 MIA2Q96PC5 1412 aa30.37■■■□□ 2.45
PHF1-209ENST00000487667 TROQ12816 1431 aaPredicted RBP30.35■■■□□ 2.45
PHF1-209ENST00000487667 CLSPNQ9HAW4 1339 aa30.31■■■□□ 2.44
PHF1-209ENST00000487667 TCOF1Q13428 1488 aaKnown RBP30.3■■■□□ 2.44
PHF1-209ENST00000487667 PTPN23Q9H3S7 1636 aa30.3■■■□□ 2.44
PHF1-209ENST00000487667 ITGAEP38570 1179 aa30.29■■■□□ 2.44
PHF1-209ENST00000487667 UACAQ9BZF9 1416 aa30.28■■■□□ 2.44
PHF1-209ENST00000487667 ARID3CA6NKF2 412 aa30.28■■■□□ 2.44
PHF1-209ENST00000487667 ADCY10Q96PN6 1610 aa30.28■■■□□ 2.44
PHF1-209ENST00000487667 SETD5Q9C0A6 1442 aa30.25■■■□□ 2.43
PHF1-209ENST00000487667 ATP10BO94823 1461 aa30.25■■■□□ 2.43
PHF1-209ENST00000487667 PLEKHD1A6NEE1 506 aa30.24■■■□□ 2.43
PHF1-209ENST00000487667 ABCC2Q92887 1545 aa30.18■■■□□ 2.42
PHF1-209ENST00000487667 ITSN2Q9NZM3 1697 aa30.18■■■□□ 2.42
PHF1-209ENST00000487667 RAB3GAP2Q9H2M9 1393 aa30.16■■■□□ 2.42
PHF1-209ENST00000487667 KIF14Q15058 1648 aa30.15■■■□□ 2.42
PHF1-209ENST00000487667 UHRF1BP1LA0JNW5 1464 aa30.14■■■□□ 2.42
PHF1-209ENST00000487667 DHX57Q6P158 1386 aaKnown RBP30.14■■■□□ 2.42
PHF1-209ENST00000487667 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
PHF1-209ENST00000487667 HFM1A2PYH4 1435 aa30.09■■■□□ 2.41
PHF1-209ENST00000487667 AKNAQ7Z591 1439 aa30.08■■■□□ 2.41
PHF1-209ENST00000487667 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
PHF1-209ENST00000487667 ACIN1Q9UKV3 1341 aaKnown RBP30.03■■■□□ 2.4
PHF1-209ENST00000487667 ABCC10Q5T3U5 1492 aa30.03■■■□□ 2.4
PHF1-209ENST00000487667 PTPRKQ15262 1439 aa30.03■■■□□ 2.4
PHF1-209ENST00000487667 CFDP1Q9UEE9 299 aaPredicted RBP30.02■■■□□ 2.4
PHF1-209ENST00000487667 KDM5BQ9UGL1 1544 aa29.99■■■□□ 2.39
PHF1-209ENST00000487667 DNMT1P26358 1616 aaKnown RBP29.99■■■□□ 2.39
PHF1-209ENST00000487667 ROCK1Q13464 1354 aa29.96■■■□□ 2.39
PHF1-209ENST00000487667 NAIPQ13075 1403 aa29.96■■■□□ 2.39
PHF1-209ENST00000487667 DAPK1P53355 1430 aa29.95■■■□□ 2.39
PHF1-209ENST00000487667 CAMSAP2Q08AD1 1489 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms