RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
PDPN-205ENST00000487038 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
PDPN-205ENST00000487038 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
PDPN-205ENST00000487038 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
PDPN-205ENST00000487038 ADCY10Q96PN6 1610 aa13.92□□□□□ -0.18
PDPN-205ENST00000487038 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDPN-205ENST00000487038 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
PDPN-205ENST00000487038 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
PDPN-205ENST00000487038 CUL7Q14999 1698 aa13.83□□□□□ -0.2
PDPN-205ENST00000487038 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
PDPN-205ENST00000487038 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.21
PDPN-205ENST00000487038 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
PDPN-205ENST00000487038 GLI2P10070 1586 aa13.74□□□□□ -0.21
PDPN-205ENST00000487038 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
PDPN-205ENST00000487038 ADGRL1O94910 1474 aa13.72□□□□□ -0.21
PDPN-205ENST00000487038 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
PDPN-205ENST00000487038 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
PDPN-205ENST00000487038 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
PDPN-205ENST00000487038 MAP3K4Q9Y6R4 1608 aa13.68□□□□□ -0.22
PDPN-205ENST00000487038 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
PDPN-205ENST00000487038 PTPRGP23470 1445 aa13.68□□□□□ -0.22
PDPN-205ENST00000487038 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
PDPN-205ENST00000487038 IQGAP2Q13576 1575 aa13.67□□□□□ -0.22
PDPN-205ENST00000487038 ASXL2Q76L83 1435 aa13.66□□□□□ -0.22
PDPN-205ENST00000487038 KIF27Q86VH2 1401 aa13.66□□□□□ -0.22
PDPN-205ENST00000487038 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
PDPN-205ENST00000487038 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
PDPN-205ENST00000487038 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
PDPN-205ENST00000487038 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
PDPN-205ENST00000487038 IGF1RP08069 1367 aa13.6□□□□□ -0.23
PDPN-205ENST00000487038 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
PDPN-205ENST00000487038 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
PDPN-205ENST00000487038 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
PDPN-205ENST00000487038 KDM5BQ9UGL1 1544 aa13.58□□□□□ -0.24
PDPN-205ENST00000487038 CFAP43Q8NDM7 1665 aa13.57□□□□□ -0.24
PDPN-205ENST00000487038 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
PDPN-205ENST00000487038 KIAA0556O60303 1618 aa13.55□□□□□ -0.24
PDPN-205ENST00000487038 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
PDPN-205ENST00000487038 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
PDPN-205ENST00000487038 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
PDPN-205ENST00000487038 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
PDPN-205ENST00000487038 KIF21BO75037 1637 aa13.51□□□□□ -0.25
PDPN-205ENST00000487038 WDR7Q9Y4E6 1490 aa13.51□□□□□ -0.25
PDPN-205ENST00000487038 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
PDPN-205ENST00000487038 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
PDPN-205ENST00000487038 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
PDPN-205ENST00000487038 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
PDPN-205ENST00000487038 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
PDPN-205ENST00000487038 ABCA8O94911 1581 aa13.4□□□□□ -0.26
PDPN-205ENST00000487038 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
PDPN-205ENST00000487038 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
PDPN-205ENST00000487038 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
PDPN-205ENST00000487038 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
PDPN-205ENST00000487038 PTPRMP28827 1452 aa13.34□□□□□ -0.27
PDPN-205ENST00000487038 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
PDPN-205ENST00000487038 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
PDPN-205ENST00000487038 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
PDPN-205ENST00000487038 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
PDPN-205ENST00000487038 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
PDPN-205ENST00000487038 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
PDPN-205ENST00000487038 NEO1Q92859 1461 aa13.28□□□□□ -0.28
PDPN-205ENST00000487038 ARHGEF40Q8TER5 1519 aa13.27□□□□□ -0.29
PDPN-205ENST00000487038 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
PDPN-205ENST00000487038 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.29
PDPN-205ENST00000487038 LMTK3Q96Q04 1460 aa13.26□□□□□ -0.29
PDPN-205ENST00000487038 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
PDPN-205ENST00000487038 RICTORQ6R327 1708 aa13.24□□□□□ -0.29
PDPN-205ENST00000487038 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
PDPN-205ENST00000487038 ATP10BO94823 1461 aa13.22□□□□□ -0.29
PDPN-205ENST00000487038 ARID4BQ4LE39 1312 aaPredicted RBP13.21□□□□□ -0.29
PDPN-205ENST00000487038 SAMD9Q5K651 1589 aa13.21□□□□□ -0.29
PDPN-205ENST00000487038 FANCAO15360 1455 aa13.19□□□□□ -0.3
PDPN-205ENST00000487038 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
PDPN-205ENST00000487038 POGZQ7Z3K3 1410 aa13.18□□□□□ -0.3
PDPN-205ENST00000487038 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
PDPN-205ENST00000487038 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
PDPN-205ENST00000487038 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
PDPN-205ENST00000487038 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
PDPN-205ENST00000487038 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
PDPN-205ENST00000487038 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
PDPN-205ENST00000487038 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
PDPN-205ENST00000487038 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
PDPN-205ENST00000487038 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
PDPN-205ENST00000487038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
PDPN-205ENST00000487038 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
PDPN-205ENST00000487038 SIGLEC1Q9BZZ2 1709 aa13.12□□□□□ -0.31
PDPN-205ENST00000487038 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
PDPN-205ENST00000487038 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
PDPN-205ENST00000487038 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
PDPN-205ENST00000487038 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
PDPN-205ENST00000487038 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
PDPN-205ENST00000487038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.31
PDPN-205ENST00000487038 HSPA2P54652 639 aa13.08□□□□□ -0.32
PDPN-205ENST00000487038 HECW1Q76N89 1606 aa13.08□□□□□ -0.32
PDPN-205ENST00000487038 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
PDPN-205ENST00000487038 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
PDPN-205ENST00000487038 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
PDPN-205ENST00000487038 ARHGEF12Q9NZN5 1544 aa13.04□□□□□ -0.32
PDPN-205ENST00000487038 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
PDPN-205ENST00000487038 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms