RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 GRIN2AQ12879 1464 aa11.87□□□□□ -0.51
CTDSPL-208ENST00000486978 NUP160Q12769 1436 aa11.86□□□□□ -0.51
CTDSPL-208ENST00000486978 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
CTDSPL-208ENST00000486978 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
CTDSPL-208ENST00000486978 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
CTDSPL-208ENST00000486978 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
CTDSPL-208ENST00000486978 PRG4Q92954 1404 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-208ENST00000486978 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
CTDSPL-208ENST00000486978 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
CTDSPL-208ENST00000486978 PPRC1Q5VV67 1664 aaKnown RBP11.76□□□□□ -0.53
CTDSPL-208ENST00000486978 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
CTDSPL-208ENST00000486978 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
CTDSPL-208ENST00000486978 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL-208ENST00000486978 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTDSPL-208ENST00000486978 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
CTDSPL-208ENST00000486978 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
CTDSPL-208ENST00000486978 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
CTDSPL-208ENST00000486978 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
CTDSPL-208ENST00000486978 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
CTDSPL-208ENST00000486978 GLI2P10070 1586 aa11.59□□□□□ -0.55
CTDSPL-208ENST00000486978 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
CTDSPL-208ENST00000486978 CUL7Q14999 1698 aa11.57□□□□□ -0.56
CTDSPL-208ENST00000486978 ASXL2Q76L83 1435 aa11.57□□□□□ -0.56
CTDSPL-208ENST00000486978 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
CTDSPL-208ENST00000486978 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
CTDSPL-208ENST00000486978 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
CTDSPL-208ENST00000486978 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
CTDSPL-208ENST00000486978 SOCS7O14512 581 aa11.54□□□□□ -0.56
CTDSPL-208ENST00000486978 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
CTDSPL-208ENST00000486978 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
CTDSPL-208ENST00000486978 KIF21BO75037 1637 aa11.51□□□□□ -0.57
CTDSPL-208ENST00000486978 PTPRGP23470 1445 aa11.51□□□□□ -0.57
CTDSPL-208ENST00000486978 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
CTDSPL-208ENST00000486978 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
CTDSPL-208ENST00000486978 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
CTDSPL-208ENST00000486978 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.57
CTDSPL-208ENST00000486978 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
CTDSPL-208ENST00000486978 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
CTDSPL-208ENST00000486978 UHRF1BP1LA0JNW5 1464 aa11.43□□□□□ -0.58
CTDSPL-208ENST00000486978 PTPRMP28827 1452 aa11.43□□□□□ -0.58
CTDSPL-208ENST00000486978 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
CTDSPL-208ENST00000486978 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
CTDSPL-208ENST00000486978 ADRA2BP18089 450 aa11.42□□□□□ -0.58
CTDSPL-208ENST00000486978 PPP6R1Q9UPN7 881 aa11.41□□□□□ -0.58
CTDSPL-208ENST00000486978 IGF1RP08069 1367 aa11.41□□□□□ -0.58
CTDSPL-208ENST00000486978 KDM5BQ9UGL1 1544 aa11.4□□□□□ -0.58
CTDSPL-208ENST00000486978 UACAQ9BZF9 1416 aa11.4□□□□□ -0.58
CTDSPL-208ENST00000486978 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
CTDSPL-208ENST00000486978 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
CTDSPL-208ENST00000486978 HSPA2P54652 639 aa11.38□□□□□ -0.59
CTDSPL-208ENST00000486978 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
CTDSPL-208ENST00000486978 MADDQ8WXG6 1647 aa11.35□□□□□ -0.59
CTDSPL-208ENST00000486978 BCORL1Q5H9F3 1711 aa11.34□□□□□ -0.59
CTDSPL-208ENST00000486978 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
CTDSPL-208ENST00000486978 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
CTDSPL-208ENST00000486978 CD109Q6YHK3 1445 aa11.34□□□□□ -0.59
CTDSPL-208ENST00000486978 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
CTDSPL-208ENST00000486978 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
CTDSPL-208ENST00000486978 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
CTDSPL-208ENST00000486978 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
CTDSPL-208ENST00000486978 IQGAP2Q13576 1575 aa11.31□□□□□ -0.6
CTDSPL-208ENST00000486978 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
CTDSPL-208ENST00000486978 PIAS4Q8N2W9 510 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL-208ENST00000486978 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
CTDSPL-208ENST00000486978 RAPGEF3O95398 923 aa11.27□□□□□ -0.61
CTDSPL-208ENST00000486978 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.61
CTDSPL-208ENST00000486978 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
CTDSPL-208ENST00000486978 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
CTDSPL-208ENST00000486978 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
CTDSPL-208ENST00000486978 UGGT2Q9NYU1 1516 aa11.23□□□□□ -0.61
CTDSPL-208ENST00000486978 STRCQ7RTU9 1775 aa11.22□□□□□ -0.61
CTDSPL-208ENST00000486978 KIF27Q86VH2 1401 aa11.22□□□□□ -0.61
CTDSPL-208ENST00000486978 ARID4BQ4LE39 1312 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL-208ENST00000486978 ABCA8O94911 1581 aa11.2□□□□□ -0.62
CTDSPL-208ENST00000486978 ARID3CA6NKF2 412 aa11.17□□□□□ -0.62
CTDSPL-208ENST00000486978 ABCA9Q8IUA7 1624 aa11.15□□□□□ -0.62
CTDSPL-208ENST00000486978 RICTORQ6R327 1708 aa11.13□□□□□ -0.63
CTDSPL-208ENST00000486978 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
CTDSPL-208ENST00000486978 ATP10BO94823 1461 aa11.12□□□□□ -0.63
CTDSPL-208ENST00000486978 FER1L4A9Z1Z3 1794 aa11.11□□□□□ -0.63
CTDSPL-208ENST00000486978 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
CTDSPL-208ENST00000486978 MSH5O43196 834 aa11.11□□□□□ -0.63
CTDSPL-208ENST00000486978 CEBPAP49715 358 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL-208ENST00000486978 MLECQ14165 292 aa11.1□□□□□ -0.63
CTDSPL-208ENST00000486978 PREX1Q8TCU6 1659 aa11.1□□□□□ -0.63
CTDSPL-208ENST00000486978 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
CTDSPL-208ENST00000486978 NEO1Q92859 1461 aa11.09□□□□□ -0.63
CTDSPL-208ENST00000486978 TTC37Q6PGP7 1564 aa11.08□□□□□ -0.64
CTDSPL-208ENST00000486978 PHLDB1Q86UU1 1377 aa11.08□□□□□ -0.64
CTDSPL-208ENST00000486978 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
CTDSPL-208ENST00000486978 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
CTDSPL-208ENST00000486978 FANCAO15360 1455 aa11.03□□□□□ -0.64
CTDSPL-208ENST00000486978 DENND4BO75064 1496 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL-208ENST00000486978 FHOD3Q2V2M9 1422 aa11.02□□□□□ -0.64
CTDSPL-208ENST00000486978 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
CTDSPL-208ENST00000486978 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
CTDSPL-208ENST00000486978 ARHGEF12Q9NZN5 1544 aa11.02□□□□□ -0.65
CTDSPL-208ENST00000486978 PTPRTO14522 1441 aa11.01□□□□□ -0.65
CTDSPL-208ENST00000486978 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
CTDSPL-208ENST00000486978 ZFYVE16Q7Z3T8 1539 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms