RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
PRDM15-212ENST00000486812 MSNP26038 577 aaKnown RBP13.69□□□□□ -0.22
PRDM15-212ENST00000486812 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
PRDM15-212ENST00000486812 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
PRDM15-212ENST00000486812 FAM9BQ8IZU0 186 aa13.67□□□□□ -0.22
PRDM15-212ENST00000486812 PTMSP20962 102 aa13.64□□□□□ -0.23
PRDM15-212ENST00000486812 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
PRDM15-212ENST00000486812 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
PRDM15-212ENST00000486812 A0A0U1RQG5 324 aaPredicted RBP13.61□□□□□ -0.23
PRDM15-212ENST00000486812 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
PRDM15-212ENST00000486812 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
PRDM15-212ENST00000486812 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
PRDM15-212ENST00000486812 MRS2Q9HD23 443 aa13.53□□□□□ -0.24
PRDM15-212ENST00000486812 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
PRDM15-212ENST00000486812 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
PRDM15-212ENST00000486812 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
PRDM15-212ENST00000486812 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
PRDM15-212ENST00000486812 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
PRDM15-212ENST00000486812 UBE2Q2Q8WVN8 375 aa13.47□□□□□ -0.25
PRDM15-212ENST00000486812 GOLGA6L3A6NEY3 463 aa13.46□□□□□ -0.26
PRDM15-212ENST00000486812 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
PRDM15-212ENST00000486812 ARID3AQ99856 593 aa13.44□□□□□ -0.26
PRDM15-212ENST00000486812 APPP05067 770 aa13.43□□□□□ -0.26
PRDM15-212ENST00000486812 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
PRDM15-212ENST00000486812 GSE1Q14687 1217 aa13.42□□□□□ -0.26
PRDM15-212ENST00000486812 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
PRDM15-212ENST00000486812 CALRP27797 417 aaKnown RBP13.4□□□□□ -0.26
PRDM15-212ENST00000486812 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
PRDM15-212ENST00000486812 NRDCO43847 1150 aa13.39□□□□□ -0.27
PRDM15-212ENST00000486812 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
PRDM15-212ENST00000486812 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
PRDM15-212ENST00000486812 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
PRDM15-212ENST00000486812 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.27
PRDM15-212ENST00000486812 ZNF771Q7L3S4 317 aaPredicted RBP13.33□□□□□ -0.27
PRDM15-212ENST00000486812 MTERF4Q7Z6M4 381 aaKnown RBP13.33□□□□□ -0.27
PRDM15-212ENST00000486812 HSCBQ8IWL3 235 aa13.33□□□□□ -0.27
PRDM15-212ENST00000486812 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
PRDM15-212ENST00000486812 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
PRDM15-212ENST00000486812 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
PRDM15-212ENST00000486812 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
PRDM15-212ENST00000486812 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
PRDM15-212ENST00000486812 WDR43Q15061 677 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRDM15-212ENST00000486812 PDE4CQ08493 712 aa13.3□□□□□ -0.28
PRDM15-212ENST00000486812 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
PRDM15-212ENST00000486812 TPM2P07951 284 aa13.27□□□□□ -0.28
PRDM15-212ENST00000486812 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.28
PRDM15-212ENST00000486812 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
PRDM15-212ENST00000486812 GZF1Q9H116 711 aaPredicted RBP13.26□□□□□ -0.29
PRDM15-212ENST00000486812 RGS3P49796 1198 aa13.26□□□□□ -0.29
PRDM15-212ENST00000486812 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.25□□□□□ -0.29
PRDM15-212ENST00000486812 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
PRDM15-212ENST00000486812 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
PRDM15-212ENST00000486812 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
PRDM15-212ENST00000486812 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
PRDM15-212ENST00000486812 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRDM15-212ENST00000486812 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.29
PRDM15-212ENST00000486812 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
PRDM15-212ENST00000486812 SYAP1Q96A49 352 aaPredicted RBP13.19□□□□□ -0.3
PRDM15-212ENST00000486812 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
PRDM15-212ENST00000486812 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PRDM15-212ENST00000486812 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
PRDM15-212ENST00000486812 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
PRDM15-212ENST00000486812 ZBTB7CA1YPR0 619 aa13.16□□□□□ -0.3
PRDM15-212ENST00000486812 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
PRDM15-212ENST00000486812 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
PRDM15-212ENST00000486812 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
PRDM15-212ENST00000486812 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
PRDM15-212ENST00000486812 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
PRDM15-212ENST00000486812 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
PRDM15-212ENST00000486812 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
PRDM15-212ENST00000486812 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
PRDM15-212ENST00000486812 EEA1Q15075 1411 aa13.12□□□□□ -0.31
PRDM15-212ENST00000486812 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
PRDM15-212ENST00000486812 ZMYND15Q9H091 742 aa13.09□□□□□ -0.31
PRDM15-212ENST00000486812 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
PRDM15-212ENST00000486812 GPS2Q13227 327 aa13.09□□□□□ -0.31
PRDM15-212ENST00000486812 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
PRDM15-212ENST00000486812 MS4A1P11836 297 aa13.07□□□□□ -0.32
PRDM15-212ENST00000486812 PHF14O94880 888 aa13.07□□□□□ -0.32
PRDM15-212ENST00000486812 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
PRDM15-212ENST00000486812 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
PRDM15-212ENST00000486812 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
PRDM15-212ENST00000486812 PDE4AP27815 886 aa13.03□□□□□ -0.32
PRDM15-212ENST00000486812 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
PRDM15-212ENST00000486812 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.32
PRDM15-212ENST00000486812 MRE11P49959 708 aa13.01□□□□□ -0.33
PRDM15-212ENST00000486812 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
PRDM15-212ENST00000486812 NFKBIBQ15653 356 aa13□□□□□ -0.33
PRDM15-212ENST00000486812 TSPYL1Q9H0U9 437 aa13□□□□□ -0.33
PRDM15-212ENST00000486812 MCCP23508 829 aa13□□□□□ -0.33
PRDM15-212ENST00000486812 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
PRDM15-212ENST00000486812 TPM4P67936 248 aa12.97□□□□□ -0.33
PRDM15-212ENST00000486812 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
PRDM15-212ENST00000486812 PDIA4P13667 645 aaKnown RBP12.97□□□□□ -0.33
PRDM15-212ENST00000486812 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
PRDM15-212ENST00000486812 FAM161AQ3B820 660 aa12.96□□□□□ -0.34
PRDM15-212ENST00000486812 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.34
PRDM15-212ENST00000486812 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.34
PRDM15-212ENST00000486812 RBM10P98175 930 aaKnown RBP12.94□□□□□ -0.34
PRDM15-212ENST00000486812 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms