RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
NECTIN3-208ENST00000486596 ERCC6Q03468 1493 aa12□□□□□ -0.49
NECTIN3-208ENST00000486596 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
NECTIN3-208ENST00000486596 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
NECTIN3-208ENST00000486596 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
NECTIN3-208ENST00000486596 CLCN6P51797 869 aa11.94□□□□□ -0.5
NECTIN3-208ENST00000486596 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
NECTIN3-208ENST00000486596 NESP48681 1621 aa11.93□□□□□ -0.5
NECTIN3-208ENST00000486596 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
NECTIN3-208ENST00000486596 FKBP8Q14318 412 aa11.91□□□□□ -0.5
NECTIN3-208ENST00000486596 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
NECTIN3-208ENST00000486596 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
NECTIN3-208ENST00000486596 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
NECTIN3-208ENST00000486596 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
NECTIN3-208ENST00000486596 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
NECTIN3-208ENST00000486596 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-208ENST00000486596 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
NECTIN3-208ENST00000486596 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
NECTIN3-208ENST00000486596 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
NECTIN3-208ENST00000486596 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
NECTIN3-208ENST00000486596 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
NECTIN3-208ENST00000486596 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
NECTIN3-208ENST00000486596 GALR2O43603 387 aaPredicted RBP11.7□□□□□ -0.54
NECTIN3-208ENST00000486596 MIER1Q8N108 512 aa11.7□□□□□ -0.54
NECTIN3-208ENST00000486596 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
NECTIN3-208ENST00000486596 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
NECTIN3-208ENST00000486596 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
NECTIN3-208ENST00000486596 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
NECTIN3-208ENST00000486596 LHX8Q68G74 356 aa11.65□□□□□ -0.54
NECTIN3-208ENST00000486596 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.55
NECTIN3-208ENST00000486596 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
NECTIN3-208ENST00000486596 WDR62O43379 1518 aa11.63□□□□□ -0.55
NECTIN3-208ENST00000486596 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
NECTIN3-208ENST00000486596 WIZO95785 1651 aa11.62□□□□□ -0.55
NECTIN3-208ENST00000486596 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
NECTIN3-208ENST00000486596 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
NECTIN3-208ENST00000486596 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
NECTIN3-208ENST00000486596 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
NECTIN3-208ENST00000486596 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
NECTIN3-208ENST00000486596 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
NECTIN3-208ENST00000486596 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
NECTIN3-208ENST00000486596 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
NECTIN3-208ENST00000486596 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
NECTIN3-208ENST00000486596 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
NECTIN3-208ENST00000486596 NUBP1P53384 320 aa11.52□□□□□ -0.57
NECTIN3-208ENST00000486596 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
NECTIN3-208ENST00000486596 CFTRP13569 1480 aa11.51□□□□□ -0.57
NECTIN3-208ENST00000486596 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
NECTIN3-208ENST00000486596 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
NECTIN3-208ENST00000486596 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
NECTIN3-208ENST00000486596 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
NECTIN3-208ENST00000486596 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
NECTIN3-208ENST00000486596 MAP3K13O43283 966 aa11.45□□□□□ -0.58
NECTIN3-208ENST00000486596 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
NECTIN3-208ENST00000486596 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
NECTIN3-208ENST00000486596 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
NECTIN3-208ENST00000486596 C7P10643 843 aa11.38□□□□□ -0.59
NECTIN3-208ENST00000486596 TIE1P35590 1138 aa11.38□□□□□ -0.59
NECTIN3-208ENST00000486596 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
NECTIN3-208ENST00000486596 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
NECTIN3-208ENST00000486596 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
NECTIN3-208ENST00000486596 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
NECTIN3-208ENST00000486596 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
NECTIN3-208ENST00000486596 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
NECTIN3-208ENST00000486596 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
NECTIN3-208ENST00000486596 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
NECTIN3-208ENST00000486596 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
NECTIN3-208ENST00000486596 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
NECTIN3-208ENST00000486596 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
NECTIN3-208ENST00000486596 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
NECTIN3-208ENST00000486596 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
NECTIN3-208ENST00000486596 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
NECTIN3-208ENST00000486596 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
NECTIN3-208ENST00000486596 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
NECTIN3-208ENST00000486596 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
NECTIN3-208ENST00000486596 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
NECTIN3-208ENST00000486596 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
NECTIN3-208ENST00000486596 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
NECTIN3-208ENST00000486596 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
NECTIN3-208ENST00000486596 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
NECTIN3-208ENST00000486596 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
NECTIN3-208ENST00000486596 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
NECTIN3-208ENST00000486596 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
NECTIN3-208ENST00000486596 PYGBP11216 843 aa11.22□□□□□ -0.61
NECTIN3-208ENST00000486596 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
NECTIN3-208ENST00000486596 GSE1Q14687 1217 aa11.22□□□□□ -0.61
NECTIN3-208ENST00000486596 ABCC8Q09428 1581 aa11.21□□□□□ -0.61
NECTIN3-208ENST00000486596 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
NECTIN3-208ENST00000486596 IER5LQ5T953 404 aa11.21□□□□□ -0.61
NECTIN3-208ENST00000486596 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
NECTIN3-208ENST00000486596 CHD1O14646 1710 aa11.21□□□□□ -0.62
NECTIN3-208ENST00000486596 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
NECTIN3-208ENST00000486596 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
NECTIN3-208ENST00000486596 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
NECTIN3-208ENST00000486596 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
NECTIN3-208ENST00000486596 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
NECTIN3-208ENST00000486596 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
NECTIN3-208ENST00000486596 TMEM106CQ9BVX2 250 aa11.17□□□□□ -0.62
NECTIN3-208ENST00000486596 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
NECTIN3-208ENST00000486596 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms