RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
CCDC142-208ENST00000486335 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
CCDC142-208ENST00000486335 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
CCDC142-208ENST00000486335 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
CCDC142-208ENST00000486335 DIP2BQ9P265 1576 aa16.7■□□□□ 0.26
CCDC142-208ENST00000486335 ADCY10Q96PN6 1610 aa16.68■□□□□ 0.26
CCDC142-208ENST00000486335 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC142-208ENST00000486335 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
CCDC142-208ENST00000486335 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
CCDC142-208ENST00000486335 KDM6BO15054 1643 aa16.6■□□□□ 0.25
CCDC142-208ENST00000486335 IGF1RP08069 1367 aa16.6■□□□□ 0.25
CCDC142-208ENST00000486335 KIAA0586Q9BVV6 1533 aa16.58■□□□□ 0.24
CCDC142-208ENST00000486335 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
CCDC142-208ENST00000486335 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
CCDC142-208ENST00000486335 PTPRGP23470 1445 aa16.52■□□□□ 0.23
CCDC142-208ENST00000486335 PPRC1Q5VV67 1664 aaKnown RBP16.49■□□□□ 0.23
CCDC142-208ENST00000486335 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
CCDC142-208ENST00000486335 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
CCDC142-208ENST00000486335 ABCC2Q92887 1545 aa16.46■□□□□ 0.23
CCDC142-208ENST00000486335 GLI2P10070 1586 aa16.45■□□□□ 0.22
CCDC142-208ENST00000486335 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
CCDC142-208ENST00000486335 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
CCDC142-208ENST00000486335 PLB1Q6P1J6 1458 aa16.42■□□□□ 0.22
CCDC142-208ENST00000486335 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
CCDC142-208ENST00000486335 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
CCDC142-208ENST00000486335 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
CCDC142-208ENST00000486335 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
CCDC142-208ENST00000486335 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
CCDC142-208ENST00000486335 DISP1Q96F81 1524 aa16.37■□□□□ 0.21
CCDC142-208ENST00000486335 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
CCDC142-208ENST00000486335 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
CCDC142-208ENST00000486335 CUL7Q14999 1698 aa16.34■□□□□ 0.21
CCDC142-208ENST00000486335 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
CCDC142-208ENST00000486335 MAP3K4Q9Y6R4 1608 aa16.31■□□□□ 0.2
CCDC142-208ENST00000486335 IQGAP2Q13576 1575 aa16.27■□□□□ 0.2
CCDC142-208ENST00000486335 TEX14Q8IWB6 1497 aa16.24■□□□□ 0.19
CCDC142-208ENST00000486335 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
CCDC142-208ENST00000486335 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
CCDC142-208ENST00000486335 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
CCDC142-208ENST00000486335 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
CCDC142-208ENST00000486335 MAGI3Q5TCQ9 1506 aa16.19■□□□□ 0.18
CCDC142-208ENST00000486335 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
CCDC142-208ENST00000486335 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
CCDC142-208ENST00000486335 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
CCDC142-208ENST00000486335 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
CCDC142-208ENST00000486335 ABCA8O94911 1581 aa16.1■□□□□ 0.17
CCDC142-208ENST00000486335 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
CCDC142-208ENST00000486335 KIF21BO75037 1637 aa16.07■□□□□ 0.16
CCDC142-208ENST00000486335 PTPRMP28827 1452 aa16.06■□□□□ 0.16
CCDC142-208ENST00000486335 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
CCDC142-208ENST00000486335 RAPGEF3O95398 923 aa16.04■□□□□ 0.16
CCDC142-208ENST00000486335 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
CCDC142-208ENST00000486335 ATP10BO94823 1461 aa16.02■□□□□ 0.15
CCDC142-208ENST00000486335 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
CCDC142-208ENST00000486335 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
CCDC142-208ENST00000486335 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
CCDC142-208ENST00000486335 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
CCDC142-208ENST00000486335 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
CCDC142-208ENST00000486335 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
CCDC142-208ENST00000486335 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
CCDC142-208ENST00000486335 FRMPD1Q5SYB0 1578 aa15.92■□□□□ 0.14
CCDC142-208ENST00000486335 HSPA2P54652 639 aa15.92■□□□□ 0.14
CCDC142-208ENST00000486335 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
CCDC142-208ENST00000486335 BCORL1Q5H9F3 1711 aa15.91■□□□□ 0.14
CCDC142-208ENST00000486335 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
CCDC142-208ENST00000486335 MADDQ8WXG6 1647 aa15.89■□□□□ 0.13
CCDC142-208ENST00000486335 NEO1Q92859 1461 aa15.89■□□□□ 0.13
CCDC142-208ENST00000486335 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
CCDC142-208ENST00000486335 ILDR2Q71H61 639 aa15.85■□□□□ 0.13
CCDC142-208ENST00000486335 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
CCDC142-208ENST00000486335 SIGLEC1Q9BZZ2 1709 aa15.82■□□□□ 0.12
CCDC142-208ENST00000486335 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
CCDC142-208ENST00000486335 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
CCDC142-208ENST00000486335 AKNAQ7Z591 1439 aa15.79■□□□□ 0.12
CCDC142-208ENST00000486335 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
CCDC142-208ENST00000486335 RIMS1Q86UR5 1692 aaKnown RBP15.79■□□□□ 0.12
CCDC142-208ENST00000486335 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
CCDC142-208ENST00000486335 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
CCDC142-208ENST00000486335 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
CCDC142-208ENST00000486335 SAMD9Q5K651 1589 aa15.77■□□□□ 0.11
CCDC142-208ENST00000486335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
CCDC142-208ENST00000486335 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
CCDC142-208ENST00000486335 RICTORQ6R327 1708 aa15.76■□□□□ 0.11
CCDC142-208ENST00000486335 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
CCDC142-208ENST00000486335 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
CCDC142-208ENST00000486335 MLECQ14165 292 aa15.72■□□□□ 0.11
CCDC142-208ENST00000486335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC142-208ENST00000486335 FANCAO15360 1455 aa15.71■□□□□ 0.11
CCDC142-208ENST00000486335 SOCS7O14512 581 aa15.71■□□□□ 0.11
CCDC142-208ENST00000486335 CEBPAP49715 358 aaPredicted RBP15.71■□□□□ 0.11
CCDC142-208ENST00000486335 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
CCDC142-208ENST00000486335 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
CCDC142-208ENST00000486335 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
CCDC142-208ENST00000486335 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
CCDC142-208ENST00000486335 POGZQ7Z3K3 1410 aa15.68■□□□□ 0.1
CCDC142-208ENST00000486335 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
CCDC142-208ENST00000486335 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
CCDC142-208ENST00000486335 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
CCDC142-208ENST00000486335 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
CCDC142-208ENST00000486335 ARHGEF12Q9NZN5 1544 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms