RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
CLRN1-206ENST00000485607 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
CLRN1-206ENST00000485607 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
CLRN1-206ENST00000485607 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
CLRN1-206ENST00000485607 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLRN1-206ENST00000485607 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
CLRN1-206ENST00000485607 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
CLRN1-206ENST00000485607 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
CLRN1-206ENST00000485607 NCAPD3P42695 1498 aa14.52□□□□□ -0.08
CLRN1-206ENST00000485607 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
CLRN1-206ENST00000485607 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
CLRN1-206ENST00000485607 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
CLRN1-206ENST00000485607 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
CLRN1-206ENST00000485607 PROM2Q8N271 834 aa14.44□□□□□ -0.1
CLRN1-206ENST00000485607 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
CLRN1-206ENST00000485607 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
CLRN1-206ENST00000485607 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
CLRN1-206ENST00000485607 MIER1Q8N108 512 aa14.41□□□□□ -0.1
CLRN1-206ENST00000485607 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-206ENST00000485607 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
CLRN1-206ENST00000485607 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
CLRN1-206ENST00000485607 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
CLRN1-206ENST00000485607 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
CLRN1-206ENST00000485607 OTUD5Q96G74 571 aa14.34□□□□□ -0.11
CLRN1-206ENST00000485607 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
CLRN1-206ENST00000485607 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.12
CLRN1-206ENST00000485607 NESP48681 1621 aa14.33□□□□□ -0.12
CLRN1-206ENST00000485607 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
CLRN1-206ENST00000485607 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
CLRN1-206ENST00000485607 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
CLRN1-206ENST00000485607 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
CLRN1-206ENST00000485607 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
CLRN1-206ENST00000485607 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
CLRN1-206ENST00000485607 CUX2O14529 1486 aa14.28□□□□□ -0.12
CLRN1-206ENST00000485607 C7P10643 843 aa14.27□□□□□ -0.13
CLRN1-206ENST00000485607 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
CLRN1-206ENST00000485607 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
CLRN1-206ENST00000485607 PLSCR2Q9NRY7 297 aa14.23□□□□□ -0.13
CLRN1-206ENST00000485607 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
CLRN1-206ENST00000485607 ATN1P54259 1190 aaPredicted RBP14.2□□□□□ -0.14
CLRN1-206ENST00000485607 MAP3K13O43283 966 aa14.19□□□□□ -0.14
CLRN1-206ENST00000485607 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
CLRN1-206ENST00000485607 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
CLRN1-206ENST00000485607 WIZO95785 1651 aa14.16□□□□□ -0.14
CLRN1-206ENST00000485607 MAMSTRQ6ZN01 415 aa14.15□□□□□ -0.14
CLRN1-206ENST00000485607 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
CLRN1-206ENST00000485607 BMP2KQ9NSY1 1161 aaPredicted RBP14.13□□□□□ -0.15
CLRN1-206ENST00000485607 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
CLRN1-206ENST00000485607 FKBP8Q14318 412 aa14.11□□□□□ -0.15
CLRN1-206ENST00000485607 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
CLRN1-206ENST00000485607 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
CLRN1-206ENST00000485607 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
CLRN1-206ENST00000485607 POTEMA6NI47 508 aa14.08□□□□□ -0.16
CLRN1-206ENST00000485607 TIE1P35590 1138 aa14.08□□□□□ -0.16
CLRN1-206ENST00000485607 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
CLRN1-206ENST00000485607 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
CLRN1-206ENST00000485607 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
CLRN1-206ENST00000485607 SEC24BO95487 1268 aa14.05□□□□□ -0.16
CLRN1-206ENST00000485607 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
CLRN1-206ENST00000485607 POTEGQ6S5H5 508 aa14.04□□□□□ -0.16
CLRN1-206ENST00000485607 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
CLRN1-206ENST00000485607 NUBP1P53384 320 aa14.01□□□□□ -0.17
CLRN1-206ENST00000485607 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
CLRN1-206ENST00000485607 FAM163AQ96GL9 167 aaPredicted RBP13.99□□□□□ -0.17
CLRN1-206ENST00000485607 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
CLRN1-206ENST00000485607 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
CLRN1-206ENST00000485607 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
CLRN1-206ENST00000485607 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
CLRN1-206ENST00000485607 WDR62O43379 1518 aa13.96□□□□□ -0.17
CLRN1-206ENST00000485607 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
CLRN1-206ENST00000485607 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
CLRN1-206ENST00000485607 CFTRP13569 1480 aa13.93□□□□□ -0.18
CLRN1-206ENST00000485607 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
CLRN1-206ENST00000485607 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
CLRN1-206ENST00000485607 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
CLRN1-206ENST00000485607 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
CLRN1-206ENST00000485607 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
CLRN1-206ENST00000485607 IER5LQ5T953 404 aa13.88□□□□□ -0.19
CLRN1-206ENST00000485607 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
CLRN1-206ENST00000485607 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
CLRN1-206ENST00000485607 PYGBP11216 843 aa13.83□□□□□ -0.2
CLRN1-206ENST00000485607 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
CLRN1-206ENST00000485607 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
CLRN1-206ENST00000485607 PLCG2P16885 1265 aa13.81□□□□□ -0.2
CLRN1-206ENST00000485607 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
CLRN1-206ENST00000485607 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
CLRN1-206ENST00000485607 SLAIN1Q8ND83 568 aa13.76□□□□□ -0.21
CLRN1-206ENST00000485607 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
CLRN1-206ENST00000485607 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
CLRN1-206ENST00000485607 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
CLRN1-206ENST00000485607 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
CLRN1-206ENST00000485607 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
CLRN1-206ENST00000485607 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
CLRN1-206ENST00000485607 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-206ENST00000485607 GSE1Q14687 1217 aa13.66□□□□□ -0.22
CLRN1-206ENST00000485607 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
CLRN1-206ENST00000485607 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
CLRN1-206ENST00000485607 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
CLRN1-206ENST00000485607 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
CLRN1-206ENST00000485607 ZNF467Q7Z7K2 595 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms